| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yoaE [H]
Identifier: 170749641
GI number: 170749641
Start: 3429786
End: 3431825
Strand: Reverse
Name: yoaE [H]
Synonym: Mrad2831_3238
Alternate gene names: 170749641
Gene position: 3431825-3429786 (Counterclockwise)
Preceding gene: 170749642
Following gene: 170749637
Centisome position: 56.46
GC content: 75.0
Gene sequence:
>2040_bases TTGGTCCGGACCGTCTGCCCGCACGATTGTCCCTCTGCCTGCAGCCTCGACGTGCAGGTCGCGGACGGGCGCGTCGTGTC GGTCCGGGGCGGCGACAATCCCTACACGGCCGGGGTGATCTGCGCGAAGGTCAGCCGCTACGGCGAGCGCGTCCACCACC CGGACCGGATCCTCCACCCGCTGGAGCGCGTCGGGCCGAAGGGCGGCGCGGCGTGGCGCCGGATCTCCTGGGACGCGGCG CTCGACCGGCTGGCGGCGGCCTTCTCGGAGACGGCGGACCGTTGGGGGGCGGAGGCGGTCTGGCCGTACAATTCGGGCGG GACCATGGGCCTCGTCCAGCGCGACGGTATCCACCGGCTCACCCACGTGATGGGCTACTCGCGGCGCAAGCGCACCATCT GCACGGCGGTCGCGATCGCGGGCTGGAGCGCCGGGGTCGGCCGGATCGCCGGCCCGGATCCCCGCGAGATGGCGCTCTCC GACCTGATCGTTGTCTGGGGCGGCAACCCGGTGAGCACCCAGGTCAACGCGATGACCCACATCAGCCGCGCCCGCAAGAC ACGGGGCGCCAAGCTGGTGGTGATCGATCCGTACCGCACCGGGACCGCGGCGGCGGCCGACCTCCACCTCGCGCTCCGGC CCGGCACCGACGGGGCGCTCGCCTGCGCGGTGCTCCACGTCCTGTTCCGCGACGGCCACGCGGACCGGGCCTACCTCGCC GCCCAGGCCGAGGACACGGCGGCGCTGGAGGCGCATCTGGCGTCGCGCACCCCCGAATGGGCGGCGGCGATCACCGGCCT GGAGCCCGCCGCGATCGAGGCCTTCGCGGCCCTCTACGGGCGCACGCCGCGCAGCTACATCCGCTGCGGCTTCGGCTTCA CCCGCAGCCGCAACGGCGCGGTGAACCTGCACGCGGTGACCTGCCTGCCGACCGTCACCGGCGCCTGGCAGCACGAGGGC GGCGGCGCCCTCTGGCAGCACGCCGCGATCTTCAACTGGGACAAGACCCTGACGGAGGGGCTCGACGCCAGGGCGCCCGG CGTGCGCGAGCTCGACATGAGCCGGATCGGCGCCGTGCTCACCGACGATCCCGACGCCCTGCTGGGCGGCCCGCCGGTCC GCGCCATGCTGATCCAGTCGGCCAATCCCGCGGTCTCCGCGCCCGACAGCGCCCGGGTGCGCGCGGGGCTGACGCGGCCG GACGTGTTCGTGGCCGTGCACGAGCAGTTCATGACCGAGACGGCCGCGCTCGCCGACCTCGTGCTGCCGGCCACCACCTT CCTGGAACACGACGACATCTACGGCGCCGGCGGCCACAGCCACATCCAGGCCGGGCCGGCGATCCTGGAGCCGCCGGGCG AGTGCCGCTCGAACCACGCGCTCCTGTCGGGGCTCGCCGCCCGGCTCGGCGCGGACCACGCGGGCTTCCGCCTGACCGCC CGGGACCTCGCCGACGCCACCCTCGCGCGCTCCGGCTGGGGCGGTCTCGACAGGCTGGAGGCGGAGGGCTGGATCGACGC GCAGCCGGATTTCGCCGAGAGCCACTTCCTGACCGGGTTCGGCCATCCCGACGGGCGCTTCCGCTTCGCCCCCGACTGGG CGGCGCTGGGTCCGCGCGCGGCCGGCATGCCGGCCCTCCCGGATCACTGGCCGGAGGCCGAGCCCGCCGACGCGGAGCAC CCGTTCCGGATGATCGCCCCGCCGGCCCGTCAGTTCCTCAACGCGACCTTCACCAACGTGCCCGAGTCGCTCCGCCGCGA GGGGCGGCCGACCTGCCTGATCCACCCGGCGGACGGCGTGCGGCTCGGGATCGGTACGGGCGACGCCGTCGAGGTCGGCA ATGCCCGCGGTCGGGTCCGGTTGCACGCGCGGCTCGCCGAGGGGCAGCAGCCGGGCGTCGTGGTGGTCGAGAGCCTGTGG CCGAGCGCGGCCTTCGCGGGCGGGGACGGGGGCATCAACACGCTGATCGGGTCGGCGCCGGCCGCGCCCAACGACGGTGC CGCCTTCCACGACACTGCGGTCTGGGTTCGAGCGGCCTGA
Upstream 100 bases:
>100_bases CCCGAGAGGCGGCGGCATGCGCGCCTTGCGGTCTTCCGGCCGAAGGCCCAGAACCGCACGGTCCTTGCTTCCCCATGCTG GCGCCACGGGAGTTCGTCGC
Downstream 100 bases:
>100_bases GCCGGGCGCTCGGGCCGTCGAAACTCACGCTCCTTTTCCGGTGCCCCCCTCGCAGAAGCCGGGGACGGACAATCGACAGC AATCCGTTGCCCGGAATCCC
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MVRTVCPHDCPSACSLDVQVADGRVVSVRGGDNPYTAGVICAKVSRYGERVHHPDRILHPLERVGPKGGAAWRRISWDAA LDRLAAAFSETADRWGAEAVWPYNSGGTMGLVQRDGIHRLTHVMGYSRRKRTICTAVAIAGWSAGVGRIAGPDPREMALS DLIVVWGGNPVSTQVNAMTHISRARKTRGAKLVVIDPYRTGTAAAADLHLALRPGTDGALACAVLHVLFRDGHADRAYLA AQAEDTAALEAHLASRTPEWAAAITGLEPAAIEAFAALYGRTPRSYIRCGFGFTRSRNGAVNLHAVTCLPTVTGAWQHEG GGALWQHAAIFNWDKTLTEGLDARAPGVRELDMSRIGAVLTDDPDALLGGPPVRAMLIQSANPAVSAPDSARVRAGLTRP DVFVAVHEQFMTETAALADLVLPATTFLEHDDIYGAGGHSHIQAGPAILEPPGECRSNHALLSGLAARLGADHAGFRLTA RDLADATLARSGWGGLDRLEAEGWIDAQPDFAESHFLTGFGHPDGRFRFAPDWAALGPRAAGMPALPDHWPEAEPADAEH PFRMIAPPARQFLNATFTNVPESLRREGRPTCLIHPADGVRLGIGTGDAVEVGNARGRVRLHARLAEGQQPGVVVVESLW PSAAFAGGDGGINTLIGSAPAAPNDGAAFHDTAVWVRAA
Sequences:
>Translated_679_residues MVRTVCPHDCPSACSLDVQVADGRVVSVRGGDNPYTAGVICAKVSRYGERVHHPDRILHPLERVGPKGGAAWRRISWDAA LDRLAAAFSETADRWGAEAVWPYNSGGTMGLVQRDGIHRLTHVMGYSRRKRTICTAVAIAGWSAGVGRIAGPDPREMALS DLIVVWGGNPVSTQVNAMTHISRARKTRGAKLVVIDPYRTGTAAAADLHLALRPGTDGALACAVLHVLFRDGHADRAYLA AQAEDTAALEAHLASRTPEWAAAITGLEPAAIEAFAALYGRTPRSYIRCGFGFTRSRNGAVNLHAVTCLPTVTGAWQHEG GGALWQHAAIFNWDKTLTEGLDARAPGVRELDMSRIGAVLTDDPDALLGGPPVRAMLIQSANPAVSAPDSARVRAGLTRP DVFVAVHEQFMTETAALADLVLPATTFLEHDDIYGAGGHSHIQAGPAILEPPGECRSNHALLSGLAARLGADHAGFRLTA RDLADATLARSGWGGLDRLEAEGWIDAQPDFAESHFLTGFGHPDGRFRFAPDWAALGPRAAGMPALPDHWPEAEPADAEH PFRMIAPPARQFLNATFTNVPESLRREGRPTCLIHPADGVRLGIGTGDAVEVGNARGRVRLHARLAEGQQPGVVVVESLW PSAAFAGGDGGINTLIGSAPAAPNDGAAFHDTAVWVRAA >Mature_679_residues MVRTVCPHDCPSACSLDVQVADGRVVSVRGGDNPYTAGVICAKVSRYGERVHHPDRILHPLERVGPKGGAAWRRISWDAA LDRLAAAFSETADRWGAEAVWPYNSGGTMGLVQRDGIHRLTHVMGYSRRKRTICTAVAIAGWSAGVGRIAGPDPREMALS DLIVVWGGNPVSTQVNAMTHISRARKTRGAKLVVIDPYRTGTAAAADLHLALRPGTDGALACAVLHVLFRDGHADRAYLA AQAEDTAALEAHLASRTPEWAAAITGLEPAAIEAFAALYGRTPRSYIRCGFGFTRSRNGAVNLHAVTCLPTVTGAWQHEG GGALWQHAAIFNWDKTLTEGLDARAPGVRELDMSRIGAVLTDDPDALLGGPPVRAMLIQSANPAVSAPDSARVRAGLTRP DVFVAVHEQFMTETAALADLVLPATTFLEHDDIYGAGGHSHIQAGPAILEPPGECRSNHALLSGLAARLGADHAGFRLTA RDLADATLARSGWGGLDRLEAEGWIDAQPDFAESHFLTGFGHPDGRFRFAPDWAALGPRAAGMPALPDHWPEAEPADAEH PFRMIAPPARQFLNATFTNVPESLRREGRPTCLIHPADGVRLGIGTGDAVEVGNARGRVRLHARLAEGQQPGVVVVESLW PSAAFAGGDGGINTLIGSAPAAPNDGAAFHDTAVWVRAA
Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds (By Similarity). [C]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm Face Of The Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787870, Length=766, Percent_Identity=25.4569190600522, Blast_Score=185, Evalue=7e-48, Organism=Escherichia coli, GI87081797, Length=766, Percent_Identity=24.4125326370757, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI171474008, Length=770, Percent_Identity=24.6753246753247, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI3868721, Length=687, Percent_Identity=24.8908296943231, Blast_Score=149, Evalue=6e-37, Organism=Escherichia coli, GI145693196, Length=710, Percent_Identity=25.4929577464789, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI87081994, Length=745, Percent_Identity=23.2214765100671, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI1787231, Length=731, Percent_Identity=22.2982216142271, Blast_Score=103, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.8.99.- [C]
Molecular weight: Translated: 71898; Mature: 71898
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRTVCPHDCPSACSLDVQVADGRVVSVRGGDNPYTAGVICAKVSRYGERVHHPDRILHP CCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH LERVGPKGGAAWRRISWDAALDRLAAAFSETADRWGAEAVWPYNSGGTMGLVQRDGIHRL HHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHH THVMGYSRRKRTICTAVAIAGWSAGVGRIAGPDPREMALSDLIVVWGGNPVSTQVNAMTH HHHHCCCHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHEEEEEEEECCCCCCHHHHHHHH ISRARKTRGAKLVVIDPYRTGTAAAADLHLALRPGTDGALACAVLHVLFRDGHADRAYLA HHHHHHHCCCEEEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEE AQAEDTAALEAHLASRTPEWAAAITGLEPAAIEAFAALYGRTPRSYIRCGFGFTRSRNGA ECCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCE VNLHAVTCLPTVTGAWQHEGGGALWQHAAIFNWDKTLTEGLDARAPGVRELDMSRIGAVL EEEEEEEEECCCCCCCEECCCCCHHHCCEEEECCHHHHCCCCCCCCCCCHHCHHHCCEEE TDDPDALLGGPPVRAMLIQSANPAVSAPDSARVRAGLTRPDVFVAVHEQFMTETAALADL ECCCCHHCCCCCCEEEEEECCCCCCCCCCCCHHEECCCCCCEEEEHHHHHHHHHHHHHHH VLPATTFLEHDDIYGAGGHSHIQAGPAILEPPGECRSNHALLSGLAARLGADHAGFRLTA HHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHCCCHHHHHHHHHHHCCCCCCCEEEH RDLADATLARSGWGGLDRLEAEGWIDAQPDFAESHFLTGFGHPDGRFRFAPDWAALGPRA HHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCHHHCCCCC AGMPALPDHWPEAEPADAEHPFRMIAPPARQFLNATFTNVPESLRREGRPTCLIHPADGV CCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCC RLGIGTGDAVEVGNARGRVRLHARLAEGQQPGVVVVESLWPSAAFAGGDGGINTLIGSAP EEECCCCCCEEECCCCCEEEEEEEECCCCCCCEEEEECCCCCCEECCCCCCHHHHHCCCC AAPNDGAAFHDTAVWVRAA CCCCCCCEEECEEEEEEEC >Mature Secondary Structure MVRTVCPHDCPSACSLDVQVADGRVVSVRGGDNPYTAGVICAKVSRYGERVHHPDRILHP CCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH LERVGPKGGAAWRRISWDAALDRLAAAFSETADRWGAEAVWPYNSGGTMGLVQRDGIHRL HHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHH THVMGYSRRKRTICTAVAIAGWSAGVGRIAGPDPREMALSDLIVVWGGNPVSTQVNAMTH HHHHCCCHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHEEEEEEEECCCCCCHHHHHHHH ISRARKTRGAKLVVIDPYRTGTAAAADLHLALRPGTDGALACAVLHVLFRDGHADRAYLA HHHHHHHCCCEEEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEE AQAEDTAALEAHLASRTPEWAAAITGLEPAAIEAFAALYGRTPRSYIRCGFGFTRSRNGA ECCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCE VNLHAVTCLPTVTGAWQHEGGGALWQHAAIFNWDKTLTEGLDARAPGVRELDMSRIGAVL EEEEEEEEECCCCCCCEECCCCCHHHCCEEEECCHHHHCCCCCCCCCCCHHCHHHCCEEE TDDPDALLGGPPVRAMLIQSANPAVSAPDSARVRAGLTRPDVFVAVHEQFMTETAALADL ECCCCHHCCCCCCEEEEEECCCCCCCCCCCCHHEECCCCCCEEEEHHHHHHHHHHHHHHH VLPATTFLEHDDIYGAGGHSHIQAGPAILEPPGECRSNHALLSGLAARLGADHAGFRLTA HHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHCCCHHHHHHHHHHHCCCCCCCEEEH RDLADATLARSGWGGLDRLEAEGWIDAQPDFAESHFLTGFGHPDGRFRFAPDWAALGPRA HHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCHHHCCCCC AGMPALPDHWPEAEPADAEHPFRMIAPPARQFLNATFTNVPESLRREGRPTCLIHPADGV CCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCC RLGIGTGDAVEVGNARGRVRLHARLAEGQQPGVVVVESLWPSAAFAGGDGGINTLIGSAP EEECCCCCCEEECCCCCEEEEEEEECCCCCCCEEEEECCCCCCEECCCCCCHHHHHCCCC AAPNDGAAFHDTAVWVRAA CCCCCCCEEECEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: May Bind 4Fe-4S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]