Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is fct [H]

Identifier: 170749636

GI number: 170749636

Start: 3421129

End: 3423345

Strand: Reverse

Name: fct [H]

Synonym: Mrad2831_3233

Alternate gene names: 170749636

Gene position: 3423345-3421129 (Counterclockwise)

Preceding gene: 170749637

Following gene: 170749635

Centisome position: 56.33

GC content: 66.26

Gene sequence:

>2217_bases
ATGTCGTATCGCTCGCTCCTCACCCTCCTCCTCGCCACCACTGCTCTCGCCGGGCCCGCGAGGGCGCAGGACGGCTCCGT
TCAGCTCAACGAGATCTCGGTCGAAGCGGCGTCGCCCGGCAATTCCGCCCCCGGCCTGACGGGCTCGGGCGGCCTCAACG
TGAGCGGGGGCGACGGCGGTACGGCAAGCACCAGCGGCGGCGGTGGCGGTCCGTCCGGGATCACCGGTTACACCGCCCGG
GTCGCCACGACCGCAACGAAAACCAACACGCCGCTGATCGAGGTCCCCCAGTCCGTGTCGGTGGTCACCCGCGAGCAGCT
GAACGACCGCAACGTTCAGACCTTCACCGACGCGGTCAACTACGTCCCCGGCGCCGTATCCGCCCGGTCCGGCTTCGATC
CGCGGTTCGATCAGATCTTCATCCGCGGCTTCGACGTGCTGACCAATCAGGGAATCTACCGAGACGGGTTGCGCGTGATC
GGGACCGGCTTCGCCTACCCGAAAAGCGAGCCCTACGGCGCGGAGGCGCTCACCATCCTGCGCGGGCCCGCCTCCGGCCT
CTACGGCCTCGGCTCGCCCGGCGGCATCCTCGACATCACGACCAAGCGTCCCGTCTTCGCGCCGTTCGGCGAGGTGCAGT
TCCAAGCCGGCAGCTTCGACCGCTTCCAGGGCAACTTCGACGTCGGGGGGCCGATCGAGGGTTCGGGCGGCACCATGGCC
TACCGTCTCACCGGCGTGCGCCGCGAGGCGGGCACCTTCATCGGTCTGGGCACGACCGACGACCAGCTCTATCTCGCTCC
CGCGTTCACCTGGAAACCGTCGGCTGATACCACATTCACGTTCCTCAGCGAGTTTCAGGTCACGAATACGCCGGCGGCGA
CGTTCTTTTACAATGACCCGGGCTTTCGGGTGTCCAAGTTCTACCAGGGCGACCCGCGCTTCATCGGCCTCGACCAGACG
CAGTACAGGGTCGGCTACGCCTTCGAGCACTTCATCACGCCGGACCTCATTTTTCGCCAGAATTTCCGGCACTACGGGCT
ATTCCTGAGCGCCAAGTACGTCGACATCAACAACATCAACGAAGCACGCACGATCGGCATGCGCGATACGGGCTACATTC
GCGAGGGCCTGGTGCAGCAGACGCTGGACAACCAGCTGGAAGCCCGCTTCGCTACAGGCCCGGTCGCGCACACCGTGGTC
GGCGGCGTCGACTACGCCCGGTACAGCCTGAGCGCACGCTTCGGGTTCGGACTGGCTCCGGACCTCAACCTCGTCACGCG
GAATTACGGCCAGCAGCTCATCCCGACGCCCCCCCTGGCGCCCGCGTCGCGCCAGAGCCAGGACCAGATCGGTGTCTACC
TGCAGGATCAAGCCAAGTTCGGAAACTTCATCCTGACGCTGAACGGGCGGCACGACTGGGTCTTCCAGAACAACTACGCG
ACGCCGGACAGCGCGGTCTCACGTCAGGACAACAGCGCCTTCACGGGCCGGGTCGGCCTGGGCTACGTCCTGGCACCGGG
GCTGGTGCCCTACGCCAGCTACGCCACGACCTTCACGCCGCAGGTGGGCATCGACCGGAACGGGCAGGCGTTCAAGCCCG
CCACGGGCGACCAGATCGAGGCCGGGGTCAAGTACCTGATCCCCGGCACCAATATCCAGACGGCGTTCGCCGGCTTCGAC
ATCAACCAGTCGAACATCCTGATCCCCGACGCGGGCAACCTCGCGTTCCAGACCGCCGGCGGCGCCGTGCGCTCGACGGG
CTTCGAGGCCGAGGCCACGGCCAACCTCGCGCCGGGCACGAACCTGACGATCGCCTACACACACGTCGACATCCGGTTCG
TGAACTCGGTCTCGGCCACCGGTCAGCCGATCGCCGGGAACCGCGTGTCCGGCATCCCCAGCGACACCTACGCGTCGTTC
CTGACCTACGCCTTCCCGCCTTCCTCGGCCCTGCGCGGTCTGCAGATCGGCGGCGGCATCCGCTTCATCGGATCCAGCTT
CGCCGACGACCAGAACACGGTGCGCAACACCGCGGTCACCCTCTACGACGCGCTGGTCGCCTACGACTTCGCGGCGCTGG
ATCCGAAGTACAAGGGCTTCCGGGCGCAGATCAACGCCTACAATATCTTCGACCGTAACTACACGACCTGCTCGTTCGGG
TTCTGCAACTTCAACCAGCCGGCACGAGTCATCGGTAGCCTGATCTATCGCTGGTGA

Upstream 100 bases:

>100_bases
GTAAGTGTGTGATCTATAACACGTTTTCGGCTTGATCAACGATCCGTGAACGGCGAACACGTGGGCACTGCGCCGCCGGA
GGCGCTCGTCAGCGTGATCT

Downstream 100 bases:

>100_bases
GAGCGTCCATCTCCGGCGCCTGCGTGTTCCGAGGCCCGGCCTCCAGGAGGACACGACGATCGTGGCCCGCCGCGCGGCGG
GCCACGATCGCGATGGCGGG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 738; Mature: 737

Protein sequence:

>738_residues
MSYRSLLTLLLATTALAGPARAQDGSVQLNEISVEAASPGNSAPGLTGSGGLNVSGGDGGTASTSGGGGGPSGITGYTAR
VATTATKTNTPLIEVPQSVSVVTREQLNDRNVQTFTDAVNYVPGAVSARSGFDPRFDQIFIRGFDVLTNQGIYRDGLRVI
GTGFAYPKSEPYGAEALTILRGPASGLYGLGSPGGILDITTKRPVFAPFGEVQFQAGSFDRFQGNFDVGGPIEGSGGTMA
YRLTGVRREAGTFIGLGTTDDQLYLAPAFTWKPSADTTFTFLSEFQVTNTPAATFFYNDPGFRVSKFYQGDPRFIGLDQT
QYRVGYAFEHFITPDLIFRQNFRHYGLFLSAKYVDINNINEARTIGMRDTGYIREGLVQQTLDNQLEARFATGPVAHTVV
GGVDYARYSLSARFGFGLAPDLNLVTRNYGQQLIPTPPLAPASRQSQDQIGVYLQDQAKFGNFILTLNGRHDWVFQNNYA
TPDSAVSRQDNSAFTGRVGLGYVLAPGLVPYASYATTFTPQVGIDRNGQAFKPATGDQIEAGVKYLIPGTNIQTAFAGFD
INQSNILIPDAGNLAFQTAGGAVRSTGFEAEATANLAPGTNLTIAYTHVDIRFVNSVSATGQPIAGNRVSGIPSDTYASF
LTYAFPPSSALRGLQIGGGIRFIGSSFADDQNTVRNTAVTLYDALVAYDFAALDPKYKGFRAQINAYNIFDRNYTTCSFG
FCNFNQPARVIGSLIYRW

Sequences:

>Translated_738_residues
MSYRSLLTLLLATTALAGPARAQDGSVQLNEISVEAASPGNSAPGLTGSGGLNVSGGDGGTASTSGGGGGPSGITGYTAR
VATTATKTNTPLIEVPQSVSVVTREQLNDRNVQTFTDAVNYVPGAVSARSGFDPRFDQIFIRGFDVLTNQGIYRDGLRVI
GTGFAYPKSEPYGAEALTILRGPASGLYGLGSPGGILDITTKRPVFAPFGEVQFQAGSFDRFQGNFDVGGPIEGSGGTMA
YRLTGVRREAGTFIGLGTTDDQLYLAPAFTWKPSADTTFTFLSEFQVTNTPAATFFYNDPGFRVSKFYQGDPRFIGLDQT
QYRVGYAFEHFITPDLIFRQNFRHYGLFLSAKYVDINNINEARTIGMRDTGYIREGLVQQTLDNQLEARFATGPVAHTVV
GGVDYARYSLSARFGFGLAPDLNLVTRNYGQQLIPTPPLAPASRQSQDQIGVYLQDQAKFGNFILTLNGRHDWVFQNNYA
TPDSAVSRQDNSAFTGRVGLGYVLAPGLVPYASYATTFTPQVGIDRNGQAFKPATGDQIEAGVKYLIPGTNIQTAFAGFD
INQSNILIPDAGNLAFQTAGGAVRSTGFEAEATANLAPGTNLTIAYTHVDIRFVNSVSATGQPIAGNRVSGIPSDTYASF
LTYAFPPSSALRGLQIGGGIRFIGSSFADDQNTVRNTAVTLYDALVAYDFAALDPKYKGFRAQINAYNIFDRNYTTCSFG
FCNFNQPARVIGSLIYRW
>Mature_737_residues
SYRSLLTLLLATTALAGPARAQDGSVQLNEISVEAASPGNSAPGLTGSGGLNVSGGDGGTASTSGGGGGPSGITGYTARV
ATTATKTNTPLIEVPQSVSVVTREQLNDRNVQTFTDAVNYVPGAVSARSGFDPRFDQIFIRGFDVLTNQGIYRDGLRVIG
TGFAYPKSEPYGAEALTILRGPASGLYGLGSPGGILDITTKRPVFAPFGEVQFQAGSFDRFQGNFDVGGPIEGSGGTMAY
RLTGVRREAGTFIGLGTTDDQLYLAPAFTWKPSADTTFTFLSEFQVTNTPAATFFYNDPGFRVSKFYQGDPRFIGLDQTQ
YRVGYAFEHFITPDLIFRQNFRHYGLFLSAKYVDINNINEARTIGMRDTGYIREGLVQQTLDNQLEARFATGPVAHTVVG
GVDYARYSLSARFGFGLAPDLNLVTRNYGQQLIPTPPLAPASRQSQDQIGVYLQDQAKFGNFILTLNGRHDWVFQNNYAT
PDSAVSRQDNSAFTGRVGLGYVLAPGLVPYASYATTFTPQVGIDRNGQAFKPATGDQIEAGVKYLIPGTNIQTAFAGFDI
NQSNILIPDAGNLAFQTAGGAVRSTGFEAEATANLAPGTNLTIAYTHVDIRFVNSVSATGQPIAGNRVSGIPSDTYASFL
TYAFPPSSALRGLQIGGGIRFIGSSFADDQNTVRNTAVTLYDALVAYDFAALDPKYKGFRAQINAYNIFDRNYTTCSFGF
CNFNQPARVIGSLIYRW

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=698, Percent_Identity=31.6618911174785, Blast_Score=309, Evalue=3e-85,
Organism=Escherichia coli, GI1787344, Length=244, Percent_Identity=28.6885245901639, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 79082; Mature: 78951

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRSLLTLLLATTALAGPARAQDGSVQLNEISVEAASPGNSAPGLTGSGGLNVSGGDGG
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEECCCCCC
TASTSGGGGGPSGITGYTARVATTATKTNTPLIEVPQSVSVVTREQLNDRNVQTFTDAVN
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHH
YVPGAVSARSGFDPRFDQIFIRGFDVLTNQGIYRDGLRVIGTGFAYPKSEPYGAEALTIL
HCCCCCCCCCCCCCCHHEEEEEEEHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEE
RGPASGLYGLGSPGGILDITTKRPVFAPFGEVQFQAGSFDRFQGNFDVGGPIEGSGGTMA
ECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCEEE
YRLTGVRREAGTFIGLGTTDDQLYLAPAFTWKPSADTTFTFLSEFQVTNTPAATFFYNDP
EEEEEEECCCCCEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEEECCC
GFRVSKFYQGDPRFIGLDQTQYRVGYAFEHFITPDLIFRQNFRHYGLFLSAKYVDINNIN
CCEEEEEECCCCCEEECCCCEEEEEEEEHHHCCCHHHHHCCCCEEEEEEEEEEEECCCCC
EARTIGMRDTGYIREGLVQQTLDNQLEARFATGPVAHTVVGGVDYARYSLSARFGFGLAP
CCEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCHHEEEEEEEECCCCCCC
DLNLVTRNYGQQLIPTPPLAPASRQSQDQIGVYLQDQAKFGNFILTLNGRHDWVFQNNYA
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEECCCC
TPDSAVSRQDNSAFTGRVGLGYVLAPGLVPYASYATTFTPQVGIDRNGQAFKPATGDQIE
CCCHHHCCCCCCEEECCCCCCEEECCCCCCHHHHHEECCCCCCCCCCCCEECCCCCCHHH
AGVKYLIPGTNIQTAFAGFDINQSNILIPDAGNLAFQTAGGAVRSTGFEAEATANLAPGT
CCCEEEECCCCCEEEEEEEECCCCCEEEECCCCEEEEECCCCEECCCCCCCCCCCCCCCC
NLTIAYTHVDIRFVNSVSATGQPIAGNRVSGIPSDTYASFLTYAFPPSSALRGLQIGGGI
CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCHHHCCCEEECCCE
RFIGSSFADDQNTVRNTAVTLYDALVAYDFAALDPKYKGFRAQINAYNIFDRNYTTCSFG
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEE
FCNFNQPARVIGSLIYRW
ECCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SYRSLLTLLLATTALAGPARAQDGSVQLNEISVEAASPGNSAPGLTGSGGLNVSGGDGG
CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEECCCCCC
TASTSGGGGGPSGITGYTARVATTATKTNTPLIEVPQSVSVVTREQLNDRNVQTFTDAVN
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCHHHHHHHHCCCCCHHHHHHHHH
YVPGAVSARSGFDPRFDQIFIRGFDVLTNQGIYRDGLRVIGTGFAYPKSEPYGAEALTIL
HCCCCCCCCCCCCCCHHEEEEEEEHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEE
RGPASGLYGLGSPGGILDITTKRPVFAPFGEVQFQAGSFDRFQGNFDVGGPIEGSGGTMA
ECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCEEE
YRLTGVRREAGTFIGLGTTDDQLYLAPAFTWKPSADTTFTFLSEFQVTNTPAATFFYNDP
EEEEEEECCCCCEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEEECCC
GFRVSKFYQGDPRFIGLDQTQYRVGYAFEHFITPDLIFRQNFRHYGLFLSAKYVDINNIN
CCEEEEEECCCCCEEECCCCEEEEEEEEHHHCCCHHHHHCCCCEEEEEEEEEEEECCCCC
EARTIGMRDTGYIREGLVQQTLDNQLEARFATGPVAHTVVGGVDYARYSLSARFGFGLAP
CCEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCHHEEEEEEEECCCCCCC
DLNLVTRNYGQQLIPTPPLAPASRQSQDQIGVYLQDQAKFGNFILTLNGRHDWVFQNNYA
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEECCCC
TPDSAVSRQDNSAFTGRVGLGYVLAPGLVPYASYATTFTPQVGIDRNGQAFKPATGDQIE
CCCHHHCCCCCCEEECCCCCCEEECCCCCCHHHHHEECCCCCCCCCCCCEECCCCCCHHH
AGVKYLIPGTNIQTAFAGFDINQSNILIPDAGNLAFQTAGGAVRSTGFEAEATANLAPGT
CCCEEEECCCCCEEEEEEEECCCCCEEEECCCCEEEEECCCCEECCCCCCCCCCCCCCCC
NLTIAYTHVDIRFVNSVSATGQPIAGNRVSGIPSDTYASFLTYAFPPSSALRGLQIGGGI
CEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCHHHCCCEEECCCE
RFIGSSFADDQNTVRNTAVTLYDALVAYDFAALDPKYKGFRAQINAYNIFDRNYTTCSFG
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEE
FCNFNQPARVIGSLIYRW
ECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]