| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749555
Identifier: 170749555
GI number: 170749555
Start: 3330439
End: 3332784
Strand: Reverse
Name: 170749555
Synonym: Mrad2831_3150
Alternate gene names: NA
Gene position: 3332784-3330439 (Counterclockwise)
Preceding gene: 170749556
Following gene: 170749554
Centisome position: 54.84
GC content: 69.82
Gene sequence:
>2346_bases ATGGCGGCGGACAACACGGCAGCGGCCCACGATGCGAAGGCCCGGACCGCGGCGAGCGCCGGAAGCGTGGCGCACGGATT CCAGGACGCGGACGACGTCCTCCCGACCTACCATATCGAGGCGCAGACCTCCCTGGTCGAGCGGCCGCTGCGCTCGCTGA AGTTCGGCGAGGCCTTCGGCGTCCTCGATTCCTACGGCGACATCGGCGTCCAGCCCGGGCCGGAAGGCCTCTATTTCCAA GACACGCGCTACCTCTCGCGCTTGGAGGTGACGGTCGAGGGCCAGCGCCCGCTGATGCTCTCCTCGGTGATGCAGGACGA TAACGGCGCGCTCAGCGTCGACATGACGACACCCGACATCCGCATCGACGCCCACGACGAGACCTCGATCCCCCGCGAGA CGATCGCGATCGAGCGCACCAAGTTCCTGTTCCGCGGCGCCTGCTACGACCGGATCGGCCTTCGCTCGTACGATTCGAAG CACCGGCGCCTGCGCATCGCCGTCACCTTCGACGCGGACTTCCGCGACCTCTTCGAGGTCCGCGGGACCGACCGTCAGGA GCGCGGCAAGCGCGGCGTCCTGGTGGCGAGCGACCGCGAGGTGCAGTTCCGCTACGTCGGCCTGGACGAGATCGTCCGGA CGACGTCCCTGCATTTCGGCCCGAAGCCCGATTCGATCGAGCCCGGCAAGGTGGCGTTCGACGTGTCGCTCCCGCCGGGC GGCCGGACCTCCCTGTTCATCCGGGTGACCTTCGAGGCGCACCGGGCCTTCACCAAGCCGCCGACCGACACGATGGTCGG CGAGGACGCGGCCGCCCGGCTGACGCTGGCGGCCAATGCCGGCGGCGCCCGGCGCGAGCCGAAGGATCTCGGTGAGGGGA CGATCTTCGCGCGCGCCTACCGCGATTCGCGGCGCGACCTGCGCGCGCTGACCGCCGGCATCACCACGATCATCTCGTCG AACGACCAGTTCAACGAGGGCCTGTGCCGGGCCACCGCCGACCTCTACATGCTGGCGAGCCGCACCCCGGAGGGCATCTA CCCGTTCGCCGGCATCCCCTGGTACTCCACGGTGTTCGGGCGCGACGGCATCATCACCGCGATGATGGCCCTGTGGATCG ACCCGAAATTCGCCCGGGGCGTCCTGCGCTACCTCGCCTCGACGCAGGCCAAGGCGGTCGATCCGGCCGCCGACGCCCAG CCCGGCAAGGTCCTGCACGAGACCCGCCGCGGCGAGATGGCGATGCTCGGCGAGGTGCCGTTCCGGCACTATTACGGCAC CATCGACGGCACGCCGCTCTTCGTGATGCTGGCCTGGGAGTACTACGCGGTCACGGGCGACCTCGAGACCGTGCGGGCGA TCTGGCCGGCCCTCGAACTGGCGCTCGAATGGATGGACCGCTACGGCGACCGCGACGGCGACGGGTTCGTCGAGTACGCC CGCGACACCGACAAGGGCCTCGAGAACCAGGGCTGGAAGGACAGCCACGATTCGATCTTCCACGCCGACGGCCACCTGGC CAAGGGCCCGATCGCCCTCTGCGAGGTGCAGGGCTACGTCTACGCGGCCAAGAACGGCATGGCGAAGCTCGCGGCGCTCA TCGGCCACGACCCGATGGCCGAGCGGCTCACCCAGGAGGCCGCGAGCCTGCGCGAGCGGTTCGACGCGGCGTTCTGGAAC GAGGAGATCGGCACCTACGCGCTGGCGCTCGACGGCGCGAAGAAGCAGTGCGCGGTCCGCTCCTCCAATGCCGGTCACGC CCTGTTCACCGGCATCGCCAAGCCGGAGCGGGCGGCGCGGGTCGCCGAGACGCTGCTGTGCAAGGACGGCTTCAACGGCT GGGGCGTGCGCACGATCGCCAAGGGCGAGGCGCGCTACAACCCGATGTCCTACCACAACGGCTCGATCTGGCCGCACGAC AACGCGCTGATCGCGATGGGTCTCGCGCGCTACGACCGCAAGCACGAGGCCGCGCGCATCTTCCAGGGGATGTTCGACAC CTCGCTCTACCAGGACCAGAAGCGGCTGCCGGAGCTGTTCTGCGGCTTCATGCGCCGCAAGCAGCGCGGGCCGGTCTCGT ACCCGGTGGCCTGCAGCCCGCAGGCCTGGGCGGCGGCGGCGCCGTTCGCGTTCCTGGCGGCCTGCCTCGGCCTCGAGCTC GACCACGAGCGCAACCGCGTCCGGCTCAAGAACCCGATCCTGCCGGGCTTCCTCGACGGGGTGACCCTTTACAACGTCAA GCTCGGCGGCTCGCGCCTGGACATCCGCTTCCAGCGCTACGACGACGACGTCACCGTCTCGGTGCAGCGCCGCCACGGCG ACGTGCAGGTCGTGGTCACCAAGTAG
Upstream 100 bases:
>100_bases AAAGGCGACTCATCCGTAGGGTGAACAAGGGCTGCTGCATCGTAGGGATGCAGCAGCCCTCTCGATTCGCACCCCTCACT TGCACCCGGAGATGCCCTGC
Downstream 100 bases:
>100_bases GGCCCGAGTCGGGAGTTCCGGGGCGGCCCGCTTCGGGTTAAGCGGGCCGCGCGGCACCTCGCGCCGCCGAGGACGGGTTC ATGCCGGCTGACCATCACGC
Product: Amylo-alpha-16-glucosidase
Products: NA
Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Glycogen Debranching -Like Protein; Glycogen Debranching Protein-Like Protein; Amylo-Alpha-1 6-Glucosidase Family Protein
Number of amino acids: Translated: 781; Mature: 780
Protein sequence:
>781_residues MAADNTAAAHDAKARTAASAGSVAHGFQDADDVLPTYHIEAQTSLVERPLRSLKFGEAFGVLDSYGDIGVQPGPEGLYFQ DTRYLSRLEVTVEGQRPLMLSSVMQDDNGALSVDMTTPDIRIDAHDETSIPRETIAIERTKFLFRGACYDRIGLRSYDSK HRRLRIAVTFDADFRDLFEVRGTDRQERGKRGVLVASDREVQFRYVGLDEIVRTTSLHFGPKPDSIEPGKVAFDVSLPPG GRTSLFIRVTFEAHRAFTKPPTDTMVGEDAAARLTLAANAGGARREPKDLGEGTIFARAYRDSRRDLRALTAGITTIISS NDQFNEGLCRATADLYMLASRTPEGIYPFAGIPWYSTVFGRDGIITAMMALWIDPKFARGVLRYLASTQAKAVDPAADAQ PGKVLHETRRGEMAMLGEVPFRHYYGTIDGTPLFVMLAWEYYAVTGDLETVRAIWPALELALEWMDRYGDRDGDGFVEYA RDTDKGLENQGWKDSHDSIFHADGHLAKGPIALCEVQGYVYAAKNGMAKLAALIGHDPMAERLTQEAASLRERFDAAFWN EEIGTYALALDGAKKQCAVRSSNAGHALFTGIAKPERAARVAETLLCKDGFNGWGVRTIAKGEARYNPMSYHNGSIWPHD NALIAMGLARYDRKHEAARIFQGMFDTSLYQDQKRLPELFCGFMRRKQRGPVSYPVACSPQAWAAAAPFAFLAACLGLEL DHERNRVRLKNPILPGFLDGVTLYNVKLGGSRLDIRFQRYDDDVTVSVQRRHGDVQVVVTK
Sequences:
>Translated_781_residues MAADNTAAAHDAKARTAASAGSVAHGFQDADDVLPTYHIEAQTSLVERPLRSLKFGEAFGVLDSYGDIGVQPGPEGLYFQ DTRYLSRLEVTVEGQRPLMLSSVMQDDNGALSVDMTTPDIRIDAHDETSIPRETIAIERTKFLFRGACYDRIGLRSYDSK HRRLRIAVTFDADFRDLFEVRGTDRQERGKRGVLVASDREVQFRYVGLDEIVRTTSLHFGPKPDSIEPGKVAFDVSLPPG GRTSLFIRVTFEAHRAFTKPPTDTMVGEDAAARLTLAANAGGARREPKDLGEGTIFARAYRDSRRDLRALTAGITTIISS NDQFNEGLCRATADLYMLASRTPEGIYPFAGIPWYSTVFGRDGIITAMMALWIDPKFARGVLRYLASTQAKAVDPAADAQ PGKVLHETRRGEMAMLGEVPFRHYYGTIDGTPLFVMLAWEYYAVTGDLETVRAIWPALELALEWMDRYGDRDGDGFVEYA RDTDKGLENQGWKDSHDSIFHADGHLAKGPIALCEVQGYVYAAKNGMAKLAALIGHDPMAERLTQEAASLRERFDAAFWN EEIGTYALALDGAKKQCAVRSSNAGHALFTGIAKPERAARVAETLLCKDGFNGWGVRTIAKGEARYNPMSYHNGSIWPHD NALIAMGLARYDRKHEAARIFQGMFDTSLYQDQKRLPELFCGFMRRKQRGPVSYPVACSPQAWAAAAPFAFLAACLGLEL DHERNRVRLKNPILPGFLDGVTLYNVKLGGSRLDIRFQRYDDDVTVSVQRRHGDVQVVVTK >Mature_780_residues AADNTAAAHDAKARTAASAGSVAHGFQDADDVLPTYHIEAQTSLVERPLRSLKFGEAFGVLDSYGDIGVQPGPEGLYFQD TRYLSRLEVTVEGQRPLMLSSVMQDDNGALSVDMTTPDIRIDAHDETSIPRETIAIERTKFLFRGACYDRIGLRSYDSKH RRLRIAVTFDADFRDLFEVRGTDRQERGKRGVLVASDREVQFRYVGLDEIVRTTSLHFGPKPDSIEPGKVAFDVSLPPGG RTSLFIRVTFEAHRAFTKPPTDTMVGEDAAARLTLAANAGGARREPKDLGEGTIFARAYRDSRRDLRALTAGITTIISSN DQFNEGLCRATADLYMLASRTPEGIYPFAGIPWYSTVFGRDGIITAMMALWIDPKFARGVLRYLASTQAKAVDPAADAQP GKVLHETRRGEMAMLGEVPFRHYYGTIDGTPLFVMLAWEYYAVTGDLETVRAIWPALELALEWMDRYGDRDGDGFVEYAR DTDKGLENQGWKDSHDSIFHADGHLAKGPIALCEVQGYVYAAKNGMAKLAALIGHDPMAERLTQEAASLRERFDAAFWNE EIGTYALALDGAKKQCAVRSSNAGHALFTGIAKPERAARVAETLLCKDGFNGWGVRTIAKGEARYNPMSYHNGSIWPHDN ALIAMGLARYDRKHEAARIFQGMFDTSLYQDQKRLPELFCGFMRRKQRGPVSYPVACSPQAWAAAAPFAFLAACLGLELD HERNRVRLKNPILPGFLDGVTLYNVKLGGSRLDIRFQRYDDDVTVSVQRRHGDVQVVVTK
Specific function: Unknown
COG id: COG3408
COG function: function code G; Glycogen debranching enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86596; Mature: 86465
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADNTAAAHDAKARTAASAGSVAHGFQDADDVLPTYHIEAQTSLVERPLRSLKFGEAFG CCCCCCCCCCCHHHHHHHCCCCHHCCCCCHHHCCCEEEEHHHHHHHHHHHHHCCCCHHHH VLDSYGDIGVQPGPEGLYFQDTRYLSRLEVTVEGQRPLMLSSVMQDDNGALSVDMTTPDI HHHCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCE RIDAHDETSIPRETIAIERTKFLFRGACYDRIGLRSYDSKHRRLRIAVTFDADFRDLFEV EEECCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHH RGTDRQERGKRGVLVASDREVQFRYVGLDEIVRTTSLHFGPKPDSIEPGKVAFDVSLPPG CCCCHHHCCCCCEEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC GRTSLFIRVTFEAHRAFTKPPTDTMVGEDAAARLTLAANAGGARREPKDLGEGTIFARAY CCEEEEEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCEEEHHH RDSRRDLRALTAGITTIISSNDQFNEGLCRATADLYMLASRTPEGIYPFAGIPWYSTVFG HHHHHHHHHHHHHHHHEECCCCCHHCCHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHC RDGIITAMMALWIDPKFARGVLRYLASTQAKAVDPAADAQPGKVLHETRRGEMAMLGEVP CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCC FRHYYGTIDGTPLFVMLAWEYYAVTGDLETVRAIWPALELALEWMDRYGDRDGDGFVEYA HHHEECCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RDTDKGLENQGWKDSHDSIFHADGHLAKGPIALCEVQGYVYAAKNGMAKLAALIGHDPMA HHHCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHCCCHHH ERLTQEAASLRERFDAAFWNEEIGTYALALDGAKKQCAVRSSNAGHALFTGIAKPERAAR HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHEEECCCCCCEEEECCCCHHHHHH VAETLLCKDGFNGWGVRTIAKGEARYNPMSYHNGSIWPHDNALIAMGLARYDRKHEAARI HHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH FQGMFDTSLYQDQKRLPELFCGFMRRKQRGPVSYPVACSPQAWAAAAPFAFLAACLGLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHCHHHHHHHHHCCCC DHERNRVRLKNPILPGFLDGVTLYNVKLGGSRLDIRFQRYDDDVTVSVQRRHGDVQVVVT CCCCCCEEECCCCCCCHHCCEEEEEEEECCCEEEEEEEEECCCEEEEEEECCCCEEEEEE K C >Mature Secondary Structure AADNTAAAHDAKARTAASAGSVAHGFQDADDVLPTYHIEAQTSLVERPLRSLKFGEAFG CCCCCCCCCCHHHHHHHCCCCHHCCCCCHHHCCCEEEEHHHHHHHHHHHHHCCCCHHHH VLDSYGDIGVQPGPEGLYFQDTRYLSRLEVTVEGQRPLMLSSVMQDDNGALSVDMTTPDI HHHCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCE RIDAHDETSIPRETIAIERTKFLFRGACYDRIGLRSYDSKHRRLRIAVTFDADFRDLFEV EEECCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHH RGTDRQERGKRGVLVASDREVQFRYVGLDEIVRTTSLHFGPKPDSIEPGKVAFDVSLPPG CCCCHHHCCCCCEEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC GRTSLFIRVTFEAHRAFTKPPTDTMVGEDAAARLTLAANAGGARREPKDLGEGTIFARAY CCEEEEEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCCEEEHHH RDSRRDLRALTAGITTIISSNDQFNEGLCRATADLYMLASRTPEGIYPFAGIPWYSTVFG HHHHHHHHHHHHHHHHEECCCCCHHCCHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHC RDGIITAMMALWIDPKFARGVLRYLASTQAKAVDPAADAQPGKVLHETRRGEMAMLGEVP CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCC FRHYYGTIDGTPLFVMLAWEYYAVTGDLETVRAIWPALELALEWMDRYGDRDGDGFVEYA HHHEECCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RDTDKGLENQGWKDSHDSIFHADGHLAKGPIALCEVQGYVYAAKNGMAKLAALIGHDPMA HHHCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHCCCHHH ERLTQEAASLRERFDAAFWNEEIGTYALALDGAKKQCAVRSSNAGHALFTGIAKPERAAR HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHEEECCCCCCEEEECCCCHHHHHH VAETLLCKDGFNGWGVRTIAKGEARYNPMSYHNGSIWPHDNALIAMGLARYDRKHEAARI HHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH FQGMFDTSLYQDQKRLPELFCGFMRRKQRGPVSYPVACSPQAWAAAAPFAFLAACLGLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHCHHHHHHHHHCCCC DHERNRVRLKNPILPGFLDGVTLYNVKLGGSRLDIRFQRYDDDVTVSVQRRHGDVQVVVT CCCCCCEEECCCCCCCHHCCEEEEEEEECCCEEEEEEEEECCCEEEEEEECCCCEEEEEE K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA