| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yjeS [H]
Identifier: 170749537
GI number: 170749537
Start: 3311040
End: 3312131
Strand: Reverse
Name: yjeS [H]
Synonym: Mrad2831_3132
Alternate gene names: 170749537
Gene position: 3312131-3311040 (Counterclockwise)
Preceding gene: 170749538
Following gene: 170749536
Centisome position: 54.5
GC content: 73.44
Gene sequence:
>1092_bases GTGACACGTCCCGACCGGCTCCCCGACCTGCCGGGCCGCCTGTCCGCCTGGCTCGCCGAGGGCGCGCAGGGCACCATGGA CTGGATGGCGGAGCGGGCGGACCAGCGCGCCAGCCCGATCGCGCTCTGGCCGGGGGTGCGCAGCATCCTGGTCCTGGCGA TGAGCTACCGGCCGGAGCACGATCCCCTCGACCTCGTGGGACGCCGCGACCGCGGTGCCGTCGCCGCCTACGCGCAGCGG CGGGATTATCACGAGGTTTTGAAGGGGCGCCTGAAAGAGTTGGGCGGGTACCTGTCGGCCAAGGGCGACGTGCGGGTGAA GGTGTTCTGCGACACCGCCCCCGTCATGGAGAAGACCCTCGCGGAGGCGGCCGGCCTCGGCTGGCAAGGCAAGCACACGG TGCTGATCTCCCGCGGGCACGGCAACTGGCTGCTCCTCGGCGCGATCTACACGAGCGCGGAGTTCGAGCCCGATGCGCCG GAGCGCGACCATTGCGGTTCCTGCCGCGCCTGCCTGGACGTCTGCCCCACCGACGCCTTCCCGGCGCCCTACCGGCTCGA TGCCCGCCGCTGCATCTCGTACCTCACGATCGAGCATGCCGGGCCGATCCCGGCGGCGTTCCGGGCGGCGATCGGCAATC GGGTCTTCGGCTGCGACGATTGCCTGGCCGTCTGCCCCTGGAACAAGTTCGCCCGCACCGCGGCGGAGAGCCGGCTCGCC GCGCGCGCGGAGTTGGCGGCCCCCTCGCTCGCGGATCTCGCGGGCCTCGACGACGCGGCGTTCCGCGCCTTCTTCGCCGG CACGCCGGTGAAGCGTACGGGGCGCGACCGCTTCCTGCGCAACGTCATGATCGCGATCGGCAATTCGGGTGACCCGTCGC TGGCGGAGGCGGCCGTCGCGCGGCTGCGCGACCCGTCCCCGCTGGTGCGCGGCATGGCGGTCTGGGCCTGCGGCCGGCTG CTGGAGCCGGAGACCGTGCGCGCGCTCCGTCGGCAGCAGGGCGAGCGCGAGACGGACGCCCACGTGCGCGACGAGTGGCG GGCCGCGACCGGCTTGACGGGATCGCGGACGGACGAGACATCCGCCGCATGA
Upstream 100 bases:
>100_bases CGGATCTGGATTTCTGAACGCGCGACGGACCTATCACGGCGGCGACCTGCGCCGCCTCGTCGAGGCCCGGGCCCGGACGC TCGGGTTCTGCGGCCTGCGC
Downstream 100 bases:
>100_bases ATCTCTTCGTCTTCGGGCTCGGTTTCACGGGCCGCCACTTCGCCGCGCGGGCACGGGCGCGCTTCGAGACCGTCCGCGCG ACCGTCACCGACCCCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MTRPDRLPDLPGRLSAWLAEGAQGTMDWMAERADQRASPIALWPGVRSILVLAMSYRPEHDPLDLVGRRDRGAVAAYAQR RDYHEVLKGRLKELGGYLSAKGDVRVKVFCDTAPVMEKTLAEAAGLGWQGKHTVLISRGHGNWLLLGAIYTSAEFEPDAP ERDHCGSCRACLDVCPTDAFPAPYRLDARRCISYLTIEHAGPIPAAFRAAIGNRVFGCDDCLAVCPWNKFARTAAESRLA ARAELAAPSLADLAGLDDAAFRAFFAGTPVKRTGRDRFLRNVMIAIGNSGDPSLAEAAVARLRDPSPLVRGMAVWACGRL LEPETVRALRRQQGERETDAHVRDEWRAATGLTGSRTDETSAA
Sequences:
>Translated_363_residues MTRPDRLPDLPGRLSAWLAEGAQGTMDWMAERADQRASPIALWPGVRSILVLAMSYRPEHDPLDLVGRRDRGAVAAYAQR RDYHEVLKGRLKELGGYLSAKGDVRVKVFCDTAPVMEKTLAEAAGLGWQGKHTVLISRGHGNWLLLGAIYTSAEFEPDAP ERDHCGSCRACLDVCPTDAFPAPYRLDARRCISYLTIEHAGPIPAAFRAAIGNRVFGCDDCLAVCPWNKFARTAAESRLA ARAELAAPSLADLAGLDDAAFRAFFAGTPVKRTGRDRFLRNVMIAIGNSGDPSLAEAAVARLRDPSPLVRGMAVWACGRL LEPETVRALRRQQGERETDAHVRDEWRAATGLTGSRTDETSAA >Mature_362_residues TRPDRLPDLPGRLSAWLAEGAQGTMDWMAERADQRASPIALWPGVRSILVLAMSYRPEHDPLDLVGRRDRGAVAAYAQRR DYHEVLKGRLKELGGYLSAKGDVRVKVFCDTAPVMEKTLAEAAGLGWQGKHTVLISRGHGNWLLLGAIYTSAEFEPDAPE RDHCGSCRACLDVCPTDAFPAPYRLDARRCISYLTIEHAGPIPAAFRAAIGNRVFGCDDCLAVCPWNKFARTAAESRLAA RAELAAPSLADLAGLDDAAFRAFFAGTPVKRTGRDRFLRNVMIAIGNSGDPSLAEAAVARLRDPSPLVRGMAVWACGRLL EPETVRALRRQQGERETDAHVRDEWRAATGLTGSRTDETSAA
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=312, Percent_Identity=37.8205128205128, Blast_Score=241, Evalue=5e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 39574; Mature: 39443
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPDRLPDLPGRLSAWLAEGAQGTMDWMAERADQRASPIALWPGVRSILVLAMSYRPEH CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCC DPLDLVGRRDRGAVAAYAQRRDYHEVLKGRLKELGGYLSAKGDVRVKVFCDTAPVMEKTL CCHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCEEEEEEECCCHHHHHHH AEAAGLGWQGKHTVLISRGHGNWLLLGAIYTSAEFEPDAPERDHCGSCRACLDVCPTDAF HHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PAPYRLDARRCISYLTIEHAGPIPAAFRAAIGNRVFGCDDCLAVCPWNKFARTAAESRLA CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHEECCCHHHHHHHHHHHHH ARAELAAPSLADLAGLDDAAFRAFFAGTPVKRTGRDRFLRNVMIAIGNSGDPSLAEAAVA HHHHHCCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH RLRDPSPLVRGMAVWACGRLLEPETVRALRRQQGERETDAHVRDEWRAATGLTGSRTDET HCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC SAA CCC >Mature Secondary Structure TRPDRLPDLPGRLSAWLAEGAQGTMDWMAERADQRASPIALWPGVRSILVLAMSYRPEH CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCC DPLDLVGRRDRGAVAAYAQRRDYHEVLKGRLKELGGYLSAKGDVRVKVFCDTAPVMEKTL CCHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCEEEEEEECCCHHHHHHH AEAAGLGWQGKHTVLISRGHGNWLLLGAIYTSAEFEPDAPERDHCGSCRACLDVCPTDAF HHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PAPYRLDARRCISYLTIEHAGPIPAAFRAAIGNRVFGCDDCLAVCPWNKFARTAAESRLA CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHEECCCHHHHHHHHHHHHH ARAELAAPSLADLAGLDDAAFRAFFAGTPVKRTGRDRFLRNVMIAIGNSGDPSLAEAAVA HHHHHCCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH RLRDPSPLVRGMAVWACGRLLEPETVRALRRQQGERETDAHVRDEWRAATGLTGSRTDET HCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC SAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]