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The map label for this gene is crtI [H]

Identifier: 170749250

GI number: 170749250

Start: 2991109

End: 2992632

Strand: Reverse

Name: crtI [H]

Synonym: Mrad2831_2843

Alternate gene names: 170749250

Gene position: 2992632-2991109 (Counterclockwise)

Preceding gene: 170749251

Following gene: 170749249

Centisome position: 49.24

GC content: 71.46

Gene sequence:

>1524_bases
ATGCTGACACTCGCGGTCGACCACCGGGTTGCGCAAGAGATCGATCGGCGCCCGCACGCCGTCGTGGTCGGCTCGGGCTT
CGGCGGTCTCGCCGCGGCGGTCCGGCTGGGCGCCCGCGGCTACCGCGTGACCGTGCTCGAGCGCCTCGCGCAGCCGGGGG
GACGCGCCCGCGTCCACCGGCAGGACGGCTTCACCTTCGACGCCGGTCCAACCATCGTCACCGCGCCGCAGCTGTTCGAG
GAACTCTGGCATCTCGCCGGTCGCAGGCTCGCCGACGACGTGACGCTAGTTCCGATGGATCCGTTCTACCGGATCCGCTT
CGCCGACGGGACGTCCTTCGCCTACAGCGGCGACGTGGACCGGATGCGCGCCGAGGTGGCGCGCTTCGCGCCCGATGATG
TTGCGGGCTACGAGCGCTTCATGGCGCACAGCCGCGCCGTGTGCCGGATCGGGTTCGAGCAGCTCGGTCACGTGCCCTTC
GGCAGCGTCGGCGCGATGCTGAAGATCGCGCCGGACCTGCTCCGCCTCTCGGGCCACCGCTCGGTACACGACGTGGTGGC
GCGCTTCATCCGCGACGAGCGGCTGCGGACGGTGTTCAGCTTCCATCCGCTCCTGATCGGGGGAAACCCGTTCCGGGCCA
GCGCCATCTACTGCCTGATCGCCGACCTCGAGCGGCGCTGGGGCGTCCACTTCGCCATGGGCGGTACCGGCCAGCTGGTC
GACGGTCTGGTGCGGCTGATCCGGTCGCAGGGCGGTCGCCTGCGCCTCGGCGTCGAGGTCGCGCGCATCCGGGTGGAGGA
GGGGGCGGCGACGGGCGTGGACCTGACGAGCGGCGAGACGATCGCCGCCGACGTGGTGGTGTCCAACGCCGACTCGGCCG
TGACGCACGCGCGTCTGCTGCCGGAGGCGCAGCGCTGGAGCCCGGGGCGGTTCCAGCGCGCCCGCTCGTCGATGGGGCTG
TTCGTCTGGTACTTCGGCACCGCGCGGCGCTACCCGGAGGTGGATCACCACACGATCCTGCTCGGGCCGCGATACCGCGG
CCTGCTCGCGGACATCTTCGATCGCAAGGTGCTGGCCGAGGATGCGAGCCTGTACCTGCACCGGCCGACCGCGACCGATC
CGAGCCTCGCCCCGCCGGGATGCGACGCCTTCTACGTGCTGGCCCCGGTTCCCAACCTCGCCGGCGGCCAGGATTGGCAG
ACCCTCGCCGAACCGTATCGGCGCCGGATCGCCGCGATGCTGGAGGCGAGCGTGATGCCCGGCCTGTCGGAGGCCATCGT
GACCTCGAAGGTGACGACGCCGCTGGATTTCCAGGACGACTTCCTGAGCTACCGCGGATCGGGCTTCGGCTTGGAGCCGG
TGCTGACGCAATCGGCCTGGTTCCGTCCGCACAACCGGTCGAGCGCGGTCCGCAATCTCTACCTCGTCGGGGCCGGCACG
CATCCGGGTGCGGGCCTCCCCGGGGTGCTCTCCTCCGCCCGCATCCTCGACAGCGTGGTCCCCGATGCCCGCGTTACCGC
CTGA

Upstream 100 bases:

>100_bases
GCGCCGGTCTCGCGGGCGAGTTCTGAACGGTCTGCGCACCGATAGGCCGCGCACGTTTCCGGCCTTGCGCGCCGGGAAAG
GACCGCGATAGTGTCAACTG

Downstream 100 bases:

>100_bases
ATTCGCCGCCGCAGCCGACCGGACCGCCTGCCGGATGGCGATCCGGGCCGGCTCGAAGAGCTTCTTCGCGGCCGGCCGAT
TGCTGCCGGCGGATATGCGC

Product: phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MLTLAVDHRVAQEIDRRPHAVVVGSGFGGLAAAVRLGARGYRVTVLERLAQPGGRARVHRQDGFTFDAGPTIVTAPQLFE
ELWHLAGRRLADDVTLVPMDPFYRIRFADGTSFAYSGDVDRMRAEVARFAPDDVAGYERFMAHSRAVCRIGFEQLGHVPF
GSVGAMLKIAPDLLRLSGHRSVHDVVARFIRDERLRTVFSFHPLLIGGNPFRASAIYCLIADLERRWGVHFAMGGTGQLV
DGLVRLIRSQGGRLRLGVEVARIRVEEGAATGVDLTSGETIAADVVVSNADSAVTHARLLPEAQRWSPGRFQRARSSMGL
FVWYFGTARRYPEVDHHTILLGPRYRGLLADIFDRKVLAEDASLYLHRPTATDPSLAPPGCDAFYVLAPVPNLAGGQDWQ
TLAEPYRRRIAAMLEASVMPGLSEAIVTSKVTTPLDFQDDFLSYRGSGFGLEPVLTQSAWFRPHNRSSAVRNLYLVGAGT
HPGAGLPGVLSSARILDSVVPDARVTA

Sequences:

>Translated_507_residues
MLTLAVDHRVAQEIDRRPHAVVVGSGFGGLAAAVRLGARGYRVTVLERLAQPGGRARVHRQDGFTFDAGPTIVTAPQLFE
ELWHLAGRRLADDVTLVPMDPFYRIRFADGTSFAYSGDVDRMRAEVARFAPDDVAGYERFMAHSRAVCRIGFEQLGHVPF
GSVGAMLKIAPDLLRLSGHRSVHDVVARFIRDERLRTVFSFHPLLIGGNPFRASAIYCLIADLERRWGVHFAMGGTGQLV
DGLVRLIRSQGGRLRLGVEVARIRVEEGAATGVDLTSGETIAADVVVSNADSAVTHARLLPEAQRWSPGRFQRARSSMGL
FVWYFGTARRYPEVDHHTILLGPRYRGLLADIFDRKVLAEDASLYLHRPTATDPSLAPPGCDAFYVLAPVPNLAGGQDWQ
TLAEPYRRRIAAMLEASVMPGLSEAIVTSKVTTPLDFQDDFLSYRGSGFGLEPVLTQSAWFRPHNRSSAVRNLYLVGAGT
HPGAGLPGVLSSARILDSVVPDARVTA
>Mature_507_residues
MLTLAVDHRVAQEIDRRPHAVVVGSGFGGLAAAVRLGARGYRVTVLERLAQPGGRARVHRQDGFTFDAGPTIVTAPQLFE
ELWHLAGRRLADDVTLVPMDPFYRIRFADGTSFAYSGDVDRMRAEVARFAPDDVAGYERFMAHSRAVCRIGFEQLGHVPF
GSVGAMLKIAPDLLRLSGHRSVHDVVARFIRDERLRTVFSFHPLLIGGNPFRASAIYCLIADLERRWGVHFAMGGTGQLV
DGLVRLIRSQGGRLRLGVEVARIRVEEGAATGVDLTSGETIAADVVVSNADSAVTHARLLPEAQRWSPGRFQRARSSMGL
FVWYFGTARRYPEVDHHTILLGPRYRGLLADIFDRKVLAEDASLYLHRPTATDPSLAPPGCDAFYVLAPVPNLAGGQDWQ
TLAEPYRRRIAAMLEASVMPGLSEAIVTSKVTTPLDFQDDFLSYRGSGFGLEPVLTQSAWFRPHNRSSAVRNLYLVGAGT
HPGAGLPGVLSSARILDSVVPDARVTA

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55421; Mature: 55421

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00982 PHYTOENE_DH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLAVDHRVAQEIDRRPHAVVVGSGFGGLAAAVRLGARGYRVTVLERLAQPGGRARVHR
CEEEEEHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEE
QDGFTFDAGPTIVTAPQLFEELWHLAGRRLADDVTLVPMDPFYRIRFADGTSFAYSGDVD
CCCEEECCCCCEEECHHHHHHHHHHHCCHHCCCEEEEECCCCEEEEEECCCCEEECCCHH
RMRAEVARFAPDDVAGYERFMAHSRAVCRIGFEQLGHVPFGSVGAMLKIAPDLLRLSGHR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHCHHHHHHCCCC
SVHDVVARFIRDERLRTVFSFHPLLIGGNPFRASAIYCLIADLERRWGVHFAMGGTGQLV
CHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHH
DGLVRLIRSQGGRLRLGVEVARIRVEEGAATGVDLTSGETIAADVVVSNADSAVTHARLL
HHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHC
PEAQRWSPGRFQRARSSMGLFVWYFGTARRYPEVDHHTILLGPRYRGLLADIFDRKVLAE
CCHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
DASLYLHRPTATDPSLAPPGCDAFYVLAPVPNLAGGQDWQTLAEPYRRRIAAMLEASVMP
CCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GLSEAIVTSKVTTPLDFQDDFLSYRGSGFGLEPVLTQSAWFRPHNRSSAVRNLYLVGAGT
CCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHEEEEEEECCC
HPGAGLPGVLSSARILDSVVPDARVTA
CCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLTLAVDHRVAQEIDRRPHAVVVGSGFGGLAAAVRLGARGYRVTVLERLAQPGGRARVHR
CEEEEEHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEE
QDGFTFDAGPTIVTAPQLFEELWHLAGRRLADDVTLVPMDPFYRIRFADGTSFAYSGDVD
CCCEEECCCCCEEECHHHHHHHHHHHCCHHCCCEEEEECCCCEEEEEECCCCEEECCCHH
RMRAEVARFAPDDVAGYERFMAHSRAVCRIGFEQLGHVPFGSVGAMLKIAPDLLRLSGHR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHCHHHHHHCCCC
SVHDVVARFIRDERLRTVFSFHPLLIGGNPFRASAIYCLIADLERRWGVHFAMGGTGQLV
CHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHH
DGLVRLIRSQGGRLRLGVEVARIRVEEGAATGVDLTSGETIAADVVVSNADSAVTHARLL
HHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHC
PEAQRWSPGRFQRARSSMGLFVWYFGTARRYPEVDHHTILLGPRYRGLLADIFDRKVLAE
CCHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
DASLYLHRPTATDPSLAPPGCDAFYVLAPVPNLAGGQDWQTLAEPYRRRIAAMLEASVMP
CCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GLSEAIVTSKVTTPLDFQDDFLSYRGSGFGLEPVLTQSAWFRPHNRSSAVRNLYLVGAGT
CCHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHEEEEEEECCC
HPGAGLPGVLSSARILDSVVPDARVTA
CCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8021167; 7721699; 10648776 [H]