| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ykuE [H]
Identifier: 170749245
GI number: 170749245
Start: 2986718
End: 2987638
Strand: Reverse
Name: ykuE [H]
Synonym: Mrad2831_2838
Alternate gene names: 170749245
Gene position: 2987638-2986718 (Counterclockwise)
Preceding gene: 170749248
Following gene: 170749244
Centisome position: 49.16
GC content: 71.34
Gene sequence:
>921_bases ATGCTGATCATGCCGAGCCGACGGCAGTTCCTGGGTGGGCTCGGCGTGGGGGCCGGCCTGACCGCCGCGACGGGCGTCTA CGCCTTCGACGTCGAGCCGCTGCACCGGCTGGTGGTGACGTCCTACGCGCCGACCCTGCCGCGCTGGGATCCGGCGCTGC GCCTGCGGGTGGCGGTGCTGGCGGATTTTCACATCTGCGAGCCGTACATGCGGTTCGACCGGGTGGCGGAGATCGTCGCG GCCACCAACGCCCTCGAGCCGGATCTGGTCCTGCTGCTCGGCGACTACCCGGCCGGGCGCATCGCGTGGCGCAAGCTGCC GCTCGATCAGTTCGCCCGGATGATGACCGAGCTCAAGGCGCCCCTCGGCACGCACGCGATCCTCGGCAACCACGATTGGT GGGACGACCACGCGGTCCAGCGGGCCGGCCGCGGCGTGCCGGCGGTCCGGCGCCTGCTGGAGGCGCAGGGCATTCCGGTG CTGGAGAATCAGGCCGTGCGCCTCGTGAAGGACGGGCGGCCGTTCTGGCTGGCCGGGCTCGGCGACCAGCAGCCGTTCTT GAACGCGTGGAGCACCTTCAGCTTCGCGGACCTGCCGCGAACCTTGCAGGCGGTCACGGACTCGGCGCCCGTGATCCTGA TGGCCCACGAGCCCGACATCTTCGTCTCGGTGCCCGACCGCGTGTCGCTGACCCTCGCCGGCCACACTCACGGCGGCCAG GTCCGCCTGTTCGGCCACGCGCCCGCCATCCGCAAGGTGCGCGGGCACGACTATTCCTACGGCCACGTCGTCCAGGACGG CCGCCACATGATCGTCTCGGGCGGCTTCGGGATGAGCCGCATCCCCGTCCGGATGGGCGTTCCGCCGGAGATCGTTCTCC TCGAACTCGGCAAGGCGGACACGTCCGCGGCGGCCAGCTGA
Upstream 100 bases:
>100_bases GCCAGGGTCCCGCGGCCGTTCAGTCGGTCGCGCCCCGCTTTCGCCGGACTGCGCGCCTAGCGGGACACGGCGAATTATCG AGTCAACAGGTCGTATCGCG
Downstream 100 bases:
>100_bases GCGGCGGGCGCAACGAACTTCACTGTTGACCCATGTATCAGTGAAGTACACCTCGGTCGCGCGCAATGAATTCTTTTCCT GTGTCCACATATCCGCGATG
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLIMPSRRQFLGGLGVGAGLTAATGVYAFDVEPLHRLVVTSYAPTLPRWDPALRLRVAVLADFHICEPYMRFDRVAEIVA ATNALEPDLVLLLGDYPAGRIAWRKLPLDQFARMMTELKAPLGTHAILGNHDWWDDHAVQRAGRGVPAVRRLLEAQGIPV LENQAVRLVKDGRPFWLAGLGDQQPFLNAWSTFSFADLPRTLQAVTDSAPVILMAHEPDIFVSVPDRVSLTLAGHTHGGQ VRLFGHAPAIRKVRGHDYSYGHVVQDGRHMIVSGGFGMSRIPVRMGVPPEIVLLELGKADTSAAAS
Sequences:
>Translated_306_residues MLIMPSRRQFLGGLGVGAGLTAATGVYAFDVEPLHRLVVTSYAPTLPRWDPALRLRVAVLADFHICEPYMRFDRVAEIVA ATNALEPDLVLLLGDYPAGRIAWRKLPLDQFARMMTELKAPLGTHAILGNHDWWDDHAVQRAGRGVPAVRRLLEAQGIPV LENQAVRLVKDGRPFWLAGLGDQQPFLNAWSTFSFADLPRTLQAVTDSAPVILMAHEPDIFVSVPDRVSLTLAGHTHGGQ VRLFGHAPAIRKVRGHDYSYGHVVQDGRHMIVSGGFGMSRIPVRMGVPPEIVLLELGKADTSAAAS >Mature_306_residues MLIMPSRRQFLGGLGVGAGLTAATGVYAFDVEPLHRLVVTSYAPTLPRWDPALRLRVAVLADFHICEPYMRFDRVAEIVA ATNALEPDLVLLLGDYPAGRIAWRKLPLDQFARMMTELKAPLGTHAILGNHDWWDDHAVQRAGRGVPAVRRLLEAQGIPV LENQAVRLVKDGRPFWLAGLGDQQPFLNAWSTFSFADLPRTLQAVTDSAPVILMAHEPDIFVSVPDRVSLTLAGHTHGGQ VRLFGHAPAIRKVRGHDYSYGHVVQDGRHMIVSGGFGMSRIPVRMGVPPEIVLLELGKADTSAAAS
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081695, Length=307, Percent_Identity=28.9902280130293, Blast_Score=78, Evalue=6e-16, Organism=Caenorhabditis elegans, GI115535030, Length=284, Percent_Identity=26.7605633802817, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI115535028, Length=284, Percent_Identity=26.7605633802817, Blast_Score=78, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006311 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 33459; Mature: 33459
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIMPSRRQFLGGLGVGAGLTAATGVYAFDVEPLHRLVVTSYAPTLPRWDPALRLRVAVL CCCCCCHHHHHCCCCCCCCHHHHCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHEEEEEH ADFHICEPYMRFDRVAEIVAATNALEPDLVLLLGDYPAGRIAWRKLPLDQFARMMTELKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHC PLGTHAILGNHDWWDDHAVQRAGRGVPAVRRLLEAQGIPVLENQAVRLVKDGRPFWLAGL CCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCEECCCCEEEEECCCCEEEEEC GDQQPFLNAWSTFSFADLPRTLQAVTDSAPVILMAHEPDIFVSVPDRVSLTLAGHTHGGQ CCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEEEECCCCCE VRLFGHAPAIRKVRGHDYSYGHVVQDGRHMIVSGGFGMSRIPVRMGVPPEIVLLELGKAD EEEEECCCHHHHHCCCCCCCCCEEECCCEEEEECCCCCEECCEEECCCCEEEEEEECCCC TSAAAS CCCCCC >Mature Secondary Structure MLIMPSRRQFLGGLGVGAGLTAATGVYAFDVEPLHRLVVTSYAPTLPRWDPALRLRVAVL CCCCCCHHHHHCCCCCCCCHHHHCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHEEEEEH ADFHICEPYMRFDRVAEIVAATNALEPDLVLLLGDYPAGRIAWRKLPLDQFARMMTELKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHC PLGTHAILGNHDWWDDHAVQRAGRGVPAVRRLLEAQGIPVLENQAVRLVKDGRPFWLAGL CCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCEECCCCEEEEECCCCEEEEEC GDQQPFLNAWSTFSFADLPRTLQAVTDSAPVILMAHEPDIFVSVPDRVSLTLAGHTHGGQ CCCCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEEEECCCCCE VRLFGHAPAIRKVRGHDYSYGHVVQDGRHMIVSGGFGMSRIPVRMGVPPEIVLLELGKAD EEEEECCCHHHHHCCCCCCCCCEEECCCEEEEECCCCCEECCEEECCCCEEEEEEECCCC TSAAAS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]