| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is bchC [H]
Identifier: 170749226
GI number: 170749226
Start: 2962428
End: 2963366
Strand: Reverse
Name: bchC [H]
Synonym: Mrad2831_2819
Alternate gene names: 170749226
Gene position: 2963366-2962428 (Counterclockwise)
Preceding gene: 170749227
Following gene: 170749225
Centisome position: 48.76
GC content: 74.23
Gene sequence:
>939_bases ATGGACGCTCTGGCCGTCATTCTGGAAAACCCGGAGCACCTCTCGGTTCAGCGCCTGGTCCTGACGCCGCCCGGCGATGC GGACGCGGTCGTGGCAGTGGCGTGGAGCGGGATCAGCACCGGCACCGAGCGCCTCCTCTGGTCGGGGCGGATGCCGCCCT TTCCGGGCATGGGCTACCCGCTGGTGCCGGGATACGAATCCGTCGGCACCGTCGTGGAGGCGGACTCCGGCGCCTCGGTC CGGGTCGGCCAGACCGTCTACGTCCCGGGGGCCCGCTGCTTCGGCGCCGTCCGGGGCCTGTTCGGTGGCGCGGCGTCCCA TCTGGTCGCGCCGGCCGCGCGCCTCGTGCCGGTGGACGGGGCCCTGGGTGAGCGGGCCTGCCTCCTGGCGCTGGCAGCGA CCGCCCATCGCGCCCTCGGGCGCCTCGTTCCCGGCGCGACGCCGCTCATCGTCGGGCACGGGGTGCTCGGCCGGCTGCTC GCCCGGCTGACGCTGGCGGCGGGCGCCGCGCCCACCGTCTGGGAAACCGACCCCGTCCGCGCGTTGGGCGACCACGGCTA CGCCGTCGTTGCGCCCGACGCGGATCCGCGCCGCGACTACGCGACGATCACGGATGTCAGCGGGAACGCCGCCGGCCTCG ATGACCTGATCGCCCGCCTGGCACCGGGAGGCGAGATCGTCCTCGCCGGGTTCTACGAGGCGCCCCTCAGCTTCGCCTTC CCGCCCGCCTTCATGCGCGAGGCCCGGATCCGGATCTCCGCGGAGTTCCGGACCGAGGACACGGCCGCGGTGACGCGGCT GATCGACGACGGTCGGCTCTCGCTCGACGGGCTGATCACCCACCGTGCCCCGGCGGCACAGGCCCAGGACGCCTACCGCA CCGCGTTCGCGGATCCGGGCTGCCTGAAGATGATCCTCGACTGGAGGGACGCCGCGTGA
Upstream 100 bases:
>100_bases AAGTAAGTGTGACTTGACGCTGGCTTGTGTCTATCTAGGATGACACAAAGCGGCTTCGTACCGGAGAGAGTCGCGACGCA AAGGGTGGACAGTTCCAGCC
Downstream 100 bases:
>100_bases ACGTTCAGCTCAACAAGGCCGCCCTGTCCCAAGCGACCCAGCTCCGCGCCGAGGCCGCGATCGAGCCCGACGCGGTCGCC ACCGCGCCGGCGAAGAAAGA
Product: chlorophyll synthesis pathway, BchC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MDALAVILENPEHLSVQRLVLTPPGDADAVVAVAWSGISTGTERLLWSGRMPPFPGMGYPLVPGYESVGTVVEADSGASV RVGQTVYVPGARCFGAVRGLFGGAASHLVAPAARLVPVDGALGERACLLALAATAHRALGRLVPGATPLIVGHGVLGRLL ARLTLAAGAAPTVWETDPVRALGDHGYAVVAPDADPRRDYATITDVSGNAAGLDDLIARLAPGGEIVLAGFYEAPLSFAF PPAFMREARIRISAEFRTEDTAAVTRLIDDGRLSLDGLITHRAPAAQAQDAYRTAFADPGCLKMILDWRDAA
Sequences:
>Translated_312_residues MDALAVILENPEHLSVQRLVLTPPGDADAVVAVAWSGISTGTERLLWSGRMPPFPGMGYPLVPGYESVGTVVEADSGASV RVGQTVYVPGARCFGAVRGLFGGAASHLVAPAARLVPVDGALGERACLLALAATAHRALGRLVPGATPLIVGHGVLGRLL ARLTLAAGAAPTVWETDPVRALGDHGYAVVAPDADPRRDYATITDVSGNAAGLDDLIARLAPGGEIVLAGFYEAPLSFAF PPAFMREARIRISAEFRTEDTAAVTRLIDDGRLSLDGLITHRAPAAQAQDAYRTAFADPGCLKMILDWRDAA >Mature_312_residues MDALAVILENPEHLSVQRLVLTPPGDADAVVAVAWSGISTGTERLLWSGRMPPFPGMGYPLVPGYESVGTVVEADSGASV RVGQTVYVPGARCFGAVRGLFGGAASHLVAPAARLVPVDGALGERACLLALAATAHRALGRLVPGATPLIVGHGVLGRLL ARLTLAAGAAPTVWETDPVRALGDHGYAVVAPDADPRRDYATITDVSGNAAGLDDLIARLAPGGEIVLAGFYEAPLSFAF PPAFMREARIRISAEFRTEDTAAVTRLIDDGRLSLDGLITHRAPAAQAQDAYRTAFADPGCLKMILDWRDAA
Specific function: This protein catalyzes the penultimate step in bacteriochlorophyll a biosynthesis [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510992, Length=324, Percent_Identity=27.4691358024691, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002085 - InterPro: IPR005903 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32457; Mature: 32457
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALAVILENPEHLSVQRLVLTPPGDADAVVAVAWSGISTGTERLLWSGRMPPFPGMGYP CCCEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCHHHEECCCCCCCCCCCCC LVPGYESVGTVVEADSGASVRVGQTVYVPGARCFGAVRGLFGGAASHLVAPAARLVPVDG CCCCCHHHCCEEECCCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHEEECCC ALGERACLLALAATAHRALGRLVPGATPLIVGHGVLGRLLARLTLAAGAAPTVWETDPVR CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCH ALGDHGYAVVAPDADPRRDYATITDVSGNAAGLDDLIARLAPGGEIVLAGFYEAPLSFAF HHCCCCCEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCC PPAFMREARIRISAEFRTEDTAAVTRLIDDGRLSLDGLITHRAPAAQAQDAYRTAFADPG CHHHHHCCEEEEEEEECCCHHHHHHHHHCCCCEEECCEEECCCCCHHHHHHHHHHCCCCC CLKMILDWRDAA HHHHEEECCCCC >Mature Secondary Structure MDALAVILENPEHLSVQRLVLTPPGDADAVVAVAWSGISTGTERLLWSGRMPPFPGMGYP CCCEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCHHHEECCCCCCCCCCCCC LVPGYESVGTVVEADSGASVRVGQTVYVPGARCFGAVRGLFGGAASHLVAPAARLVPVDG CCCCCHHHCCEEECCCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHEEECCC ALGERACLLALAATAHRALGRLVPGATPLIVGHGVLGRLLARLTLAAGAAPTVWETDPVR CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCH ALGDHGYAVVAPDADPRRDYATITDVSGNAAGLDDLIARLAPGGEIVLAGFYEAPLSFAF HHCCCCCEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCC PPAFMREARIRISAEFRTEDTAAVTRLIDDGRLSLDGLITHRAPAAQAQDAYRTAFADPG CHHHHHCCEEEEEEEECCCHHHHHHHHHCCCCEEECCEEECCCCCHHHHHHHHHHCCCCC CLKMILDWRDAA HHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2555268; 2550757; 8468299 [H]