Click here to switch to the map view.

The map label for this gene is pufM [H]

Identifier: 170749218

GI number: 170749218

Start: 2955637

End: 2956617

Strand: Reverse

Name: pufM [H]

Synonym: Mrad2831_2811

Alternate gene names: 170749218

Gene position: 2956617-2955637 (Counterclockwise)

Preceding gene: 170749219

Following gene: 170749217

Centisome position: 48.65

GC content: 66.77

Gene sequence:

>981_bases
ATGGCCTATTACCAGAACATCTTCACGCAGGTTCAGGTGCGCCCGCTGGTACCGGAGCACGGCGTCCCGGTGGCGGTCGA
CGACCGCGTCGGCAAGCCGTTCAACAGCTACCTGTTCGGGCTCATCGGCAACAGCCAGGTCGGACCGATCTACATCGGCT
ATATCGCGGCGCTGTCGATCACCTGCGGCCTGATCGCCTTCGAGATCATCGGGCTCAACATGTGGGCGTCGGTGAACTGG
GATCCGGTCCAGTTCGTCCGGCAGCTGCCGTGGCTGGCCCTGGAGCCGCCCCTGCCGAAATACGGGCTGAAGGTGCTCCC
GCCCCTCAACGAGGGCGGCTGGTGGCTCATCGCCGGCTTCTTTCTGACGGCCTCGATCCTGCTCTGGTGGGTTCACCTCT
ACCGGCGGGCGCGGGCACTCGGGCTGGGCACCCACGTGCCGTGGGCCTTCGCGTCGGCCATCTGGCTCTATCTCGTCCTC
GGCTTCATCCGGCCGCTCCTGATGGGTTCGTGGTCGGAAGCCGTGCCCTTCGGCATCTTCCCGCACCTCGACTGGACCGC
GGCCTTCTCGCTCCGCTACGGGAACCTGTTCTACAACCCGTTCCACATGCTCTCGATCACGTTCCTCTACGGATCGACGC
TGCTGTTCGCCATGCACGGGGGCACGATCCTGGCCTGCTCGCGCTACGGCGCGGAGCGCGAGATCGACCAGATCGTCGAC
CGCGGCACGGCCACCGAGCGCGCCGCCCTGTTCTGGCGCTGGACCATGGGCTTCAACGCCACGATGGAGTCGATCCACCG
CTGGGCGTGGTGGTTCGCCGTGCTGACGACGCTGACCGGCGGCATCGGCATCCTGCTCACCGGGACCGTGGTCGACAACT
GGTACCTCTGGGCCGTCAAGCACGGCGTCGCGCCCTCCTACCCGCAGGTCTACGGCCCGATCGTGGATCCCGCCCATCTC
GCACCCGGCATGAAGCCGTGA

Upstream 100 bases:

>100_bases
ACCTGCCGGTGTGGCGATGATTGATCGCATGGGATCGGAACGAGGGGACTAACGCGGGTCGCCGCCGCTCGGCGCGCGGC
ACTCCGGGGGAGGGCAGGCC

Downstream 100 bases:

>100_bases
GGAGGCCGTCATGAAGACGATTCTGGCGGTCGCCGGCGGGGCGCTGGCCCTCTTCCTCACCATCGCGATGTTCGGCGGCG
CCGGCTGGACCCATCCGCCG

Product: photosynthetic reaction center subunit M

Products: NA

Alternate protein names: Photosynthetic reaction center M subunit [H]

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MAYYQNIFTQVQVRPLVPEHGVPVAVDDRVGKPFNSYLFGLIGNSQVGPIYIGYIAALSITCGLIAFEIIGLNMWASVNW
DPVQFVRQLPWLALEPPLPKYGLKVLPPLNEGGWWLIAGFFLTASILLWWVHLYRRARALGLGTHVPWAFASAIWLYLVL
GFIRPLLMGSWSEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHMLSITFLYGSTLLFAMHGGTILACSRYGAEREIDQIVD
RGTATERAALFWRWTMGFNATMESIHRWAWWFAVLTTLTGGIGILLTGTVVDNWYLWAVKHGVAPSYPQVYGPIVDPAHL
APGMKP

Sequences:

>Translated_326_residues
MAYYQNIFTQVQVRPLVPEHGVPVAVDDRVGKPFNSYLFGLIGNSQVGPIYIGYIAALSITCGLIAFEIIGLNMWASVNW
DPVQFVRQLPWLALEPPLPKYGLKVLPPLNEGGWWLIAGFFLTASILLWWVHLYRRARALGLGTHVPWAFASAIWLYLVL
GFIRPLLMGSWSEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHMLSITFLYGSTLLFAMHGGTILACSRYGAEREIDQIVD
RGTATERAALFWRWTMGFNATMESIHRWAWWFAVLTTLTGGIGILLTGTVVDNWYLWAVKHGVAPSYPQVYGPIVDPAHL
APGMKP
>Mature_325_residues
AYYQNIFTQVQVRPLVPEHGVPVAVDDRVGKPFNSYLFGLIGNSQVGPIYIGYIAALSITCGLIAFEIIGLNMWASVNWD
PVQFVRQLPWLALEPPLPKYGLKVLPPLNEGGWWLIAGFFLTASILLWWVHLYRRARALGLGTHVPWAFASAIWLYLVLG
FIRPLLMGSWSEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHMLSITFLYGSTLLFAMHGGTILACSRYGAEREIDQIVDR
GTATERAALFWRWTMGFNATMESIHRWAWWFAVLTTLTGGIGILLTGTVVDNWYLWAVKHGVAPSYPQVYGPIVDPAHLA
PGMKP

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center pufL/M/psbA/D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000484
- InterPro:   IPR005781 [H]

Pfam domain/function: PF00124 Photo_RC [H]

EC number: NA

Molecular weight: Translated: 36648; Mature: 36517

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS00244 REACTION_CENTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYYQNIFTQVQVRPLVPEHGVPVAVDDRVGKPFNSYLFGLIGNSQVGPIYIGYIAALSI
CCHHHHHHHHEEEEECCCCCCCCEEECCCCCCCHHHHHEEECCCCCCCCHHHHHHHHHHH
TCGLIAFEIIGLNMWASVNWDPVQFVRQLPWLALEPPLPKYGLKVLPPLNEGGWWLIAGF
HHHHHHHHHHHHHEEECCCCCHHHHHHHCCCEEECCCCCCCCCEECCCCCCCCCHHHHHH
FLTASILLWWVHLYRRARALGLGTHVPWAFASAIWLYLVLGFIRPLLMGSWSEAVPFGIF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PHLDWTAAFSLRYGNLFYNPFHMLSITFLYGSTLLFAMHGGTILACSRYGAEREIDQIVD
CCCCHHEEEEEEECCEEECHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCHHHHHHHHH
RGTATERAALFWRWTMGFNATMESIHRWAWWFAVLTTLTGGIGILLTGTVVDNWYLWAVK
CCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEE
HGVAPSYPQVYGPIVDPAHLAPGMKP
CCCCCCCCHHCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
AYYQNIFTQVQVRPLVPEHGVPVAVDDRVGKPFNSYLFGLIGNSQVGPIYIGYIAALSI
CHHHHHHHHEEEEECCCCCCCCEEECCCCCCCHHHHHEEECCCCCCCCHHHHHHHHHHH
TCGLIAFEIIGLNMWASVNWDPVQFVRQLPWLALEPPLPKYGLKVLPPLNEGGWWLIAGF
HHHHHHHHHHHHHEEECCCCCHHHHHHHCCCEEECCCCCCCCCEECCCCCCCCCHHHHHH
FLTASILLWWVHLYRRARALGLGTHVPWAFASAIWLYLVLGFIRPLLMGSWSEAVPFGIF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PHLDWTAAFSLRYGNLFYNPFHMLSITFLYGSTLLFAMHGGTILACSRYGAEREIDQIVD
CCCCHHEEEEEEECCEEECHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCHHHHHHHHH
RGTATERAALFWRWTMGFNATMESIHRWAWWFAVLTTLTGGIGILLTGTVVDNWYLWAVK
CCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEE
HGVAPSYPQVYGPIVDPAHLAPGMKP
CCCCCCCCHHCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8300574 [H]