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The map label for this gene is pufC [H]

Identifier: 170749217

GI number: 170749217

Start: 2954523

End: 2955626

Strand: Reverse

Name: pufC [H]

Synonym: Mrad2831_2810

Alternate gene names: 170749217

Gene position: 2955626-2954523 (Counterclockwise)

Preceding gene: 170749218

Following gene: 170749216

Centisome position: 48.63

GC content: 66.58

Gene sequence:

>1104_bases
ATGAAGACGATTCTGGCGGTCGCCGGCGGGGCGCTGGCCCTCTTCCTCACCATCGCGATGTTCGGCGGCGCCGGCTGGAC
CCATCCGCCGATGGCGAACAAGCAGACCGGCTTCCGCGGGACGGGGATGGACCTGATCCGCACCAGAGCCGGCAACGAGG
CGCTGTCGGACGCCAACAGGGCGCCCGCGCCGGCCGATCCGGCCGAGGCGGGCGGCGACAAGGCCTCGGCCGTCTATCAG
AACGTCCAAGTTCTGGGCGATCTCTCGGCCGAGCAGTTCAACCGTCTGATGGTGTCGATCACCGAGTGGGTCGCGCCGCA
GCAGGGCTGCACCTACTGCCACAGCACCGAGAACATGGCGTCCGACGAACTTTACCAGAAGCGCGTCGCCCGCCGCATGA
TCCAGATGACGCAGTACATCAACGCCACGTGGAAGGAGAATCACGTCCATCAGGCGGGGGTGACCTGCTACACCTGCCAC
CGCGGCAATCCGGTGCCGGCCAATATCTGGTTCGACCACCCGGTTCAGGGGGCGGGGCGCTTCATCCCGCGCAACAACAG
CCAGAACCTGGCCTCCGCGGAAGTCGGCAACACCTCGCTGCCGTACGACGTCTATCAGGCCTTCTACCAGCACAAGGAGA
CGTCGGAGGACGCGGTCCGGGTCAACGCGACCACGGCGCTGCCCGAGACGAAGGGCAAGCCGATCCAGGACGCGGAGAAG
ACCTTCGCGATCATGATCAGCATGTCGCAGTCGCTCGGGGTGAACTGCACCTTCTGCCACAACACCCGCTCGGTCGCGCA
GTGGGACACCAGCACGCCCAACCGCGTCCATGCCTGGTACGGCATCCGCATGGTGCGTGACCTCAACCAGGACTACATGG
AGCCGCTGACCACGACATTCCCGCGCAACCGGCTCGGGATCCTGGGCGACGCGCCGAAGATCAACTGCGCCACTTGCCAC
AACGGCGCCAACAAGCCGCTCAACGGCGCCAACGTGATCGAACCCTATCCGGAGCTGTCGCGCCCGACGATCGCCGTGAG
CCTGCCGACCGGCGAGGCCAAGGACCCGATCCCCGGGACCGAGACCCCGACGCCGAAGCCCTGA

Upstream 100 bases:

>100_bases
GCCGTCAAGCACGGCGTCGCGCCCTCCTACCCGCAGGTCTACGGCCCGATCGTGGATCCCGCCCATCTCGCACCCGGCAT
GAAGCCGTGAGGAGGCCGTC

Downstream 100 bases:

>100_bases
TCGGGCCCGGAGCGGCCGGACCGACCGGCCGCTCCGCTCAAGCTACAGGGAACCTCCGTGAGGTAGGGGCGTCGATACCG
GCGGCCAAGCTCGGCCCTGC

Product: photosynthetic reaction center cytochrome c subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKTILAVAGGALALFLTIAMFGGAGWTHPPMANKQTGFRGTGMDLIRTRAGNEALSDANRAPAPADPAEAGGDKASAVYQ
NVQVLGDLSAEQFNRLMVSITEWVAPQQGCTYCHSTENMASDELYQKRVARRMIQMTQYINATWKENHVHQAGVTCYTCH
RGNPVPANIWFDHPVQGAGRFIPRNNSQNLASAEVGNTSLPYDVYQAFYQHKETSEDAVRVNATTALPETKGKPIQDAEK
TFAIMISMSQSLGVNCTFCHNTRSVAQWDTSTPNRVHAWYGIRMVRDLNQDYMEPLTTTFPRNRLGILGDAPKINCATCH
NGANKPLNGANVIEPYPELSRPTIAVSLPTGEAKDPIPGTETPTPKP

Sequences:

>Translated_367_residues
MKTILAVAGGALALFLTIAMFGGAGWTHPPMANKQTGFRGTGMDLIRTRAGNEALSDANRAPAPADPAEAGGDKASAVYQ
NVQVLGDLSAEQFNRLMVSITEWVAPQQGCTYCHSTENMASDELYQKRVARRMIQMTQYINATWKENHVHQAGVTCYTCH
RGNPVPANIWFDHPVQGAGRFIPRNNSQNLASAEVGNTSLPYDVYQAFYQHKETSEDAVRVNATTALPETKGKPIQDAEK
TFAIMISMSQSLGVNCTFCHNTRSVAQWDTSTPNRVHAWYGIRMVRDLNQDYMEPLTTTFPRNRLGILGDAPKINCATCH
NGANKPLNGANVIEPYPELSRPTIAVSLPTGEAKDPIPGTETPTPKP
>Mature_367_residues
MKTILAVAGGALALFLTIAMFGGAGWTHPPMANKQTGFRGTGMDLIRTRAGNEALSDANRAPAPADPAEAGGDKASAVYQ
NVQVLGDLSAEQFNRLMVSITEWVAPQQGCTYCHSTENMASDELYQKRVARRMIQMTQYINATWKENHVHQAGVTCYTCH
RGNPVPANIWFDHPVQGAGRFIPRNNSQNLASAEVGNTSLPYDVYQAFYQHKETSEDAVRVNATTALPETKGKPIQDAEK
TFAIMISMSQSLGVNCTFCHNTRSVAQWDTSTPNRVHAWYGIRMVRDLNQDYMEPLTTTFPRNRLGILGDAPKINCATCH
NGANKPLNGANVIEPYPELSRPTIAVSLPTGEAKDPIPGTETPTPKP

Specific function: The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR023119
- InterPro:   IPR003158 [H]

Pfam domain/function: PF02276 CytoC_RC [H]

EC number: NA

Molecular weight: Translated: 40062; Mature: 40062

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTILAVAGGALALFLTIAMFGGAGWTHPPMANKQTGFRGTGMDLIRTRAGNEALSDANR
CCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCC
APAPADPAEAGGDKASAVYQNVQVLGDLSAEQFNRLMVSITEWVAPQQGCTYCHSTENMA
CCCCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHH
SDELYQKRVARRMIQMTQYINATWKENHVHQAGVTCYTCHRGNPVPANIWFDHPVQGAGR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCCCCCCEEEECCCCCCCCC
FIPRNNSQNLASAEVGNTSLPYDVYQAFYQHKETSEDAVRVNATTALPETKGKPIQDAEK
CCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHH
TFAIMISMSQSLGVNCTFCHNTRSVAQWDTSTPNRVHAWYGIRMVRDLNQDYMEPLTTTF
EEEEEEEEHHCCCCEEEEECCCCCHHCCCCCCCCEEEHHHHHHHHHHHCHHHHHHHHHHC
PRNRLGILGDAPKINCATCHNGANKPLNGANVIEPYPELSRPTIAVSLPTGEAKDPIPGT
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
ETPTPKP
CCCCCCC
>Mature Secondary Structure
MKTILAVAGGALALFLTIAMFGGAGWTHPPMANKQTGFRGTGMDLIRTRAGNEALSDANR
CCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCC
APAPADPAEAGGDKASAVYQNVQVLGDLSAEQFNRLMVSITEWVAPQQGCTYCHSTENMA
CCCCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHH
SDELYQKRVARRMIQMTQYINATWKENHVHQAGVTCYTCHRGNPVPANIWFDHPVQGAGR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCCCCCCEEEECCCCCCCCC
FIPRNNSQNLASAEVGNTSLPYDVYQAFYQHKETSEDAVRVNATTALPETKGKPIQDAEK
CCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHH
TFAIMISMSQSLGVNCTFCHNTRSVAQWDTSTPNRVHAWYGIRMVRDLNQDYMEPLTTTF
EEEEEEEEHHCCCCEEEEECCCCCHHCCCCCCCCEEEHHHHHHHHHHHCHHHHHHHHHHC
PRNRLGILGDAPKINCATCHNGANKPLNGANVIEPYPELSRPTIAVSLPTGEAKDPIPGT
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
ETPTPKP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8300574 [H]