| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170749184
Identifier: 170749184
GI number: 170749184
Start: 2914973
End: 2915953
Strand: Reverse
Name: 170749184
Synonym: Mrad2831_2777
Alternate gene names: NA
Gene position: 2915953-2914973 (Counterclockwise)
Preceding gene: 170749186
Following gene: 170749183
Centisome position: 47.98
GC content: 72.27
Gene sequence:
>981_bases ATGCTGTCACGGCGCGCGATGCTCGCCGGGGGCCTGCTCGGCGGCCTCGGCCTGCGGGCGGCGCGCGCCGACGTGCCCAC GATCCGACTCGGGAGCCTGCCCTTCGGCACGTCCACCTGGGAGGCGGCGGTGATCAAGGCCCGCGGCCTCGACACGGCCA ACGGCTTCGCGCTCGACGCGGTCAAGCTCGCGGGCAACGACGCGGCCCGGATCAGCTTCATCGGCGGGCAGGTCGACACG ATCATCGGCGACCTGCTCTGGGCCGCGCGCCTCGGCAACGACGGCCAAGCGGTGCGCTTCATCCCGTACTCGACCTCCGA GGGCGGCGTCATGGTTCCGGGCGACAGCCCGGTGAAGAGCCTCAAGGATCTCGCGGGCAAGCGCCTCGGGGTGGCCGGCG GCCCCCTGGACAAGAACTGGCTGCTCCTCCGAGCACAGGCCAAGGACGCGGCCGGCATCGACCTCGAGCAGGCCGCCGAG ATCGCCTACGGCGCGCCGCCGCTGATCACGCTGAAGCTGGAGCAGGGCGCCCTCGACGCGGCGCTGACTTACTGGACCTA CTGCGCCCGGCTGAAGGCCAAGGGGTACCGGCAGCTCGTCGGCGCGGAAGACATCATGCACGCCCTCGGGGTCCCCGGAG ACGTGGCGCTGATCGGCTACCTGTTCCAGGACGCCACCGTGAAGGAGAAGCCCGCGGCCGTGGCGGCCTTCGCCCGGGCC TCGCGCGCCGCCAAGGACATGCTCGCGTCCGATCCGAGCACGTGGCAGATCGTGCGCCCGCTGATGGCGGCGGAGGACGA GGCAACCTTCGAGGCCCTGAAGCACGATTTCCTGGCCGGCATCCCGCGCCGCTCCACCGAGGAGGAGCGCGCCGACGCCG AGAAGCTCTACGCGGTGATGGCGCGGCTCGGCGGCGCCCGCCTCGTCGGCAAGGGCGACGCGCTCCCGCCGGACCTCTAC TACACCGGCCGCAATGGTTGA
Upstream 100 bases:
>100_bases CAGGTGTGAGCCCTATGACCTTTTGCCAATGGCGTCCGGCTCGGTCGGCACTCCAGTCTGCCGCCGCTGAAGACTGCGCA ATACGATGGGAGAAGGCGTG
Downstream 100 bases:
>100_bases GGCCCCCGTCCGGCGGGCGCGCGCGGCGGCCGTCCCGAGCACCGGGACCGCATGGGCGCGCTGACCCGCATCGCGTCCCT GGCCGTGCTCCTCGCCGCCT
Product: putative ABC transporter periplasmic solute-binding protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MLSRRAMLAGGLLGGLGLRAARADVPTIRLGSLPFGTSTWEAAVIKARGLDTANGFALDAVKLAGNDAARISFIGGQVDT IIGDLLWAARLGNDGQAVRFIPYSTSEGGVMVPGDSPVKSLKDLAGKRLGVAGGPLDKNWLLLRAQAKDAAGIDLEQAAE IAYGAPPLITLKLEQGALDAALTYWTYCARLKAKGYRQLVGAEDIMHALGVPGDVALIGYLFQDATVKEKPAAVAAFARA SRAAKDMLASDPSTWQIVRPLMAAEDEATFEALKHDFLAGIPRRSTEEERADAEKLYAVMARLGGARLVGKGDALPPDLY YTGRNG
Sequences:
>Translated_326_residues MLSRRAMLAGGLLGGLGLRAARADVPTIRLGSLPFGTSTWEAAVIKARGLDTANGFALDAVKLAGNDAARISFIGGQVDT IIGDLLWAARLGNDGQAVRFIPYSTSEGGVMVPGDSPVKSLKDLAGKRLGVAGGPLDKNWLLLRAQAKDAAGIDLEQAAE IAYGAPPLITLKLEQGALDAALTYWTYCARLKAKGYRQLVGAEDIMHALGVPGDVALIGYLFQDATVKEKPAAVAAFARA SRAAKDMLASDPSTWQIVRPLMAAEDEATFEALKHDFLAGIPRRSTEEERADAEKLYAVMARLGGARLVGKGDALPPDLY YTGRNG >Mature_326_residues MLSRRAMLAGGLLGGLGLRAARADVPTIRLGSLPFGTSTWEAAVIKARGLDTANGFALDAVKLAGNDAARISFIGGQVDT IIGDLLWAARLGNDGQAVRFIPYSTSEGGVMVPGDSPVKSLKDLAGKRLGVAGGPLDKNWLLLRAQAKDAAGIDLEQAAE IAYGAPPLITLKLEQGALDAALTYWTYCARLKAKGYRQLVGAEDIMHALGVPGDVALIGYLFQDATVKEKPAAVAAFARA SRAAKDMLASDPSTWQIVRPLMAAEDEATFEALKHDFLAGIPRRSTEEERADAEKLYAVMARLGGARLVGKGDALPPDLY YTGRNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34346; Mature: 34346
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRRAMLAGGLLGGLGLRAARADVPTIRLGSLPFGTSTWEAAVIKARGLDTANGFALDA CCCCHHHHHHHHHHHHCHHHHHCCCCEEEECCCCCCCCCHHHEEEEECCCCCCCCCEEEE VKLAGNDAARISFIGGQVDTIIGDLLWAARLGNDGQAVRFIPYSTSEGGVMVPGDSPVKS EEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCHHHH LKDLAGKRLGVAGGPLDKNWLLLRAQAKDAAGIDLEQAAEIAYGAPPLITLKLEQGALDA HHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHH ALTYWTYCARLKAKGYRQLVGAEDIMHALGVPGDVALIGYLFQDATVKEKPAAVAAFARA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH SRAAKDMLASDPSTWQIVRPLMAAEDEATFEALKHDFLAGIPRRSTEEERADAEKLYAVM HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ARLGGARLVGKGDALPPDLYYTGRNG HHHCCCEEEECCCCCCCCEEECCCCC >Mature Secondary Structure MLSRRAMLAGGLLGGLGLRAARADVPTIRLGSLPFGTSTWEAAVIKARGLDTANGFALDA CCCCHHHHHHHHHHHHCHHHHHCCCCEEEECCCCCCCCCHHHEEEEECCCCCCCCCEEEE VKLAGNDAARISFIGGQVDTIIGDLLWAARLGNDGQAVRFIPYSTSEGGVMVPGDSPVKS EEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCHHHH LKDLAGKRLGVAGGPLDKNWLLLRAQAKDAAGIDLEQAAEIAYGAPPLITLKLEQGALDA HHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHH ALTYWTYCARLKAKGYRQLVGAEDIMHALGVPGDVALIGYLFQDATVKEKPAAVAAFARA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH SRAAKDMLASDPSTWQIVRPLMAAEDEATFEALKHDFLAGIPRRSTEEERADAEKLYAVM HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ARLGGARLVGKGDALPPDLYYTGRNG HHHCCCEEEECCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA