Click here to switch to the map view.

The map label for this gene is rep [H]

Identifier: 170749044

GI number: 170749044

Start: 2790918

End: 2792693

Strand: Reverse

Name: rep [H]

Synonym: Mrad2831_2637

Alternate gene names: 170749044

Gene position: 2792693-2790918 (Counterclockwise)

Preceding gene: 170749061

Following gene: 170749043

Centisome position: 45.95

GC content: 70.55

Gene sequence:

>1776_bases
GTGTCCTTCGAGTTGTCGCCCCTTGACGGGGCAACCGTGGCCGCGACAGGCCCAACCGGCGATGCGTCAGTCATCTACCG
TCCCACAACATACGCCCTGCGCTACTCGCACTACGCCACGCTGCTGCATCCCGTGGACACGCGCGGCATCGCGGTCCTGA
CGCACTCCGTCCGGCTGCCGGAGCTCGACGAGGAAGGCCAGACGCAGTGGCGTACGAAGGCCACCGGCGCCGACGGGTCC
GAGCTCGCGGAAGCCGTCGACCGGCTCCGGGCCCGCGGGATCACGATGAACCTGTTCCGGAAGCGCAAGGGCGAGGACCA
CCGCGAGAAGCCCCGGAAGCCCACCTGGAACCTCGCGGCGCTGACCTGCACGTGGGTCGACCTGGACTTCTACAAGATGC
CGGAGTTCGCCCACGCGACCGCTCGGACGATGGTCCCGCTGATCATCGACCGCTGCTACGACCGCAACATCCCGTTCCCG
TCGTATATCATGTCGTCCGGCCGGGGAGCCTTGGTGGTGTGGCTCCACGAGCGGCAGAAGCCGGCCGTGCTCCAGGTCTG
GCGGGCGATGCAGCGCAGCCTGCACCGGACCTTCGAGGACATGGGCAGCGACCACCGTGCCTTGCCCGCGACAATGACGT
TCTCCGTCGCCGGCCACACGAAGACGGAACGGAAGACCGGCATCAAGCGCCTCGTCGAGGTCGTCTACCCGGAGTACGTC
GACGAGATCGTCCGCCACGGTTTCACGCACCTGCGCGAGGCGCTGCTCGACTACACGCCCAAGCAGGTCGCAGCGCACCT
CAAGGCCCAGGCCGCCAAGCGCGCCGTCAAGGCCAAGGCGAAGGTCGAGCGCCGGGCGACGGCCGCGGCGGCGGGTGAGC
CGATCAAGCGACCGCCCTACACCCTGGTGACGCTGCACCGGGCCGTGCACCGCGACCTGACGCGCCTGTTCGAGGCACGG
TTCCCGTTCGGGCTGCCGCCGAAGGGGTACCGCGACGCGTGGTGCTTCGACATCTGCACCGCCGCGGCGTGGTTCATGAC
CCCCGAGGAGCTCGCGGCCGAGGTCGACCGGATGGCGGACCTCTGCGGCCTGAAGCAGCGTGAGGCCCGGGGCATGATGG
GCTCGCTCCTGCAGAGGGCGCGCCGGGCCGCACAGGGGCGTACCGACGCCTATGGCAGCGCCCGGTCGGACCCCCGCTAC
AAGTCGAATCCCGCGAAGCTCGTCTCGGCCCACGGCATCGAACGATCCGAGATGGTGCGGCTCGACCTGCGCATCCTCGT
GAACGCCGGCGTCCGTCGCGACCGCGAGGCCCAGCGCTCCCAGAACCGCCGCGCGGTCGCCGGCGCCAAGCCCCGGGGCG
ACGCGCAGGCTGCGCGGCTGGCGCTCGGGCAGCGCGGTATCGCCAAGCGCGGGCAGGGCATGACGCTGGCCGCCATCGCG
GCCGAGGAGGCGGTGAGCGTCTCGCAGCTCAGGAAGGCCATCCGCGAAGCATCGGTCGTCGGCGCCATCGGCAAGACCGT
GCCGAAGCCGAAGCAGGGACGTCCGCGCAAGGCCGACCCAGCCCCGGCTGGAATGTGTCACGATTCGACCGGGTCTATTG
ACGCGTGCGCGCAGCCCGTCGAGCCGCCGGCCGCTGTTGTCCCTGTCGAGCAGGGGGCCTATACTGCGCCCGTTCGCTGT
TCTGCACCTCAGACTGCAACCGACGCCCGCTGCGCGCCTACCGGCCCGGCGGGCGTTGTCGTGTCGGATGATGAGCCCGC
CCCGGCTCCCGCGTAG

Upstream 100 bases:

>100_bases
AGTTTGCCACGCCGGGGGGCAGTCTGAGTGCCGGAAACGATTTGCCGGGTCGCGGGTAGAGGTGCCTCGCGGGCCGGCAG
TAGCCGGAGAACAGCGAACC

Downstream 100 bases:

>100_bases
CCTGGAACGGGTCACGCCCGGCGGCGCACCCTGCCGGGCATGAGCACGACCAATCGCGTAGGCATCGCCGCCGACGTCGC
CGGCCAGATAATGGACTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 591; Mature: 590

Protein sequence:

>591_residues
MSFELSPLDGATVAATGPTGDASVIYRPTTYALRYSHYATLLHPVDTRGIAVLTHSVRLPELDEEGQTQWRTKATGADGS
ELAEAVDRLRARGITMNLFRKRKGEDHREKPRKPTWNLAALTCTWVDLDFYKMPEFAHATARTMVPLIIDRCYDRNIPFP
SYIMSSGRGALVVWLHERQKPAVLQVWRAMQRSLHRTFEDMGSDHRALPATMTFSVAGHTKTERKTGIKRLVEVVYPEYV
DEIVRHGFTHLREALLDYTPKQVAAHLKAQAAKRAVKAKAKVERRATAAAAGEPIKRPPYTLVTLHRAVHRDLTRLFEAR
FPFGLPPKGYRDAWCFDICTAAAWFMTPEELAAEVDRMADLCGLKQREARGMMGSLLQRARRAAQGRTDAYGSARSDPRY
KSNPAKLVSAHGIERSEMVRLDLRILVNAGVRRDREAQRSQNRRAVAGAKPRGDAQAARLALGQRGIAKRGQGMTLAAIA
AEEAVSVSQLRKAIREASVVGAIGKTVPKPKQGRPRKADPAPAGMCHDSTGSIDACAQPVEPPAAVVPVEQGAYTAPVRC
SAPQTATDARCAPTGPAGVVVSDDEPAPAPA

Sequences:

>Translated_591_residues
MSFELSPLDGATVAATGPTGDASVIYRPTTYALRYSHYATLLHPVDTRGIAVLTHSVRLPELDEEGQTQWRTKATGADGS
ELAEAVDRLRARGITMNLFRKRKGEDHREKPRKPTWNLAALTCTWVDLDFYKMPEFAHATARTMVPLIIDRCYDRNIPFP
SYIMSSGRGALVVWLHERQKPAVLQVWRAMQRSLHRTFEDMGSDHRALPATMTFSVAGHTKTERKTGIKRLVEVVYPEYV
DEIVRHGFTHLREALLDYTPKQVAAHLKAQAAKRAVKAKAKVERRATAAAAGEPIKRPPYTLVTLHRAVHRDLTRLFEAR
FPFGLPPKGYRDAWCFDICTAAAWFMTPEELAAEVDRMADLCGLKQREARGMMGSLLQRARRAAQGRTDAYGSARSDPRY
KSNPAKLVSAHGIERSEMVRLDLRILVNAGVRRDREAQRSQNRRAVAGAKPRGDAQAARLALGQRGIAKRGQGMTLAAIA
AEEAVSVSQLRKAIREASVVGAIGKTVPKPKQGRPRKADPAPAGMCHDSTGSIDACAQPVEPPAAVVPVEQGAYTAPVRC
SAPQTATDARCAPTGPAGVVVSDDEPAPAPA
>Mature_590_residues
SFELSPLDGATVAATGPTGDASVIYRPTTYALRYSHYATLLHPVDTRGIAVLTHSVRLPELDEEGQTQWRTKATGADGSE
LAEAVDRLRARGITMNLFRKRKGEDHREKPRKPTWNLAALTCTWVDLDFYKMPEFAHATARTMVPLIIDRCYDRNIPFPS
YIMSSGRGALVVWLHERQKPAVLQVWRAMQRSLHRTFEDMGSDHRALPATMTFSVAGHTKTERKTGIKRLVEVVYPEYVD
EIVRHGFTHLREALLDYTPKQVAAHLKAQAAKRAVKAKAKVERRATAAAAGEPIKRPPYTLVTLHRAVHRDLTRLFEARF
PFGLPPKGYRDAWCFDICTAAAWFMTPEELAAEVDRMADLCGLKQREARGMMGSLLQRARRAAQGRTDAYGSARSDPRYK
SNPAKLVSAHGIERSEMVRLDLRILVNAGVRRDREAQRSQNRRAVAGAKPRGDAQAARLALGQRGIAKRGQGMTLAAIAA
EEAVSVSQLRKAIREASVVGAIGKTVPKPKQGRPRKADPAPAGMCHDSTGSIDACAQPVEPPAAVVPVEQGAYTAPVRCS
APQTATDARCAPTGPAGVVVSDDEPAPAPA

Specific function: Is involved in replication of pIP404 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64799; Mature: 64668

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFELSPLDGATVAATGPTGDASVIYRPTTYALRYSHYATLLHPVDTRGIAVLTHSVRLP
CCCCCCCCCCCEEEECCCCCCCEEEECCCHHEEEHHHHHHHHCCCCCCCEEEEEECCCCC
ELDEEGQTQWRTKATGADGSELAEAVDRLRARGITMNLFRKRKGEDHREKPRKPTWNLAA
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHCCCCCCCCEEE
LTCTWVDLDFYKMPEFAHATARTMVPLIIDRCYDRNIPFPSYIMSSGRGALVVWLHERQK
EEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEEECCCC
PAVLQVWRAMQRSLHRTFEDMGSDHRALPATMTFSVAGHTKTERKTGIKRLVEVVYPEYV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
DEIVRHGFTHLREALLDYTPKQVAAHLKAQAAKRAVKAKAKVERRATAAAAGEPIKRPPY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
TLVTLHRAVHRDLTRLFEARFPFGLPPKGYRDAWCFDICTAAAWFMTPEELAAEVDRMAD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LCGLKQREARGMMGSLLQRARRAAQGRTDAYGSARSDPRYKSNPAKLVSAHGIERSEMVR
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHH
LDLRILVNAGVRRDREAQRSQNRRAVAGAKPRGDAQAARLALGQRGIAKRGQGMTLAAIA
HHHHHHHHCCCCCCHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCHHHCCCCCEEEEEH
AEEAVSVSQLRKAIREASVVGAIGKTVPKPKQGRPRKADPAPAGMCHDSTGSIDACAQPV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
EPPAAVVPVEQGAYTAPVRCSAPQTATDARCAPTGPAGVVVSDDEPAPAPA
CCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SFELSPLDGATVAATGPTGDASVIYRPTTYALRYSHYATLLHPVDTRGIAVLTHSVRLP
CCCCCCCCCCEEEECCCCCCCEEEECCCHHEEEHHHHHHHHCCCCCCCEEEEEECCCCC
ELDEEGQTQWRTKATGADGSELAEAVDRLRARGITMNLFRKRKGEDHREKPRKPTWNLAA
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHCCCCCCCCEEE
LTCTWVDLDFYKMPEFAHATARTMVPLIIDRCYDRNIPFPSYIMSSGRGALVVWLHERQK
EEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEEECCCC
PAVLQVWRAMQRSLHRTFEDMGSDHRALPATMTFSVAGHTKTERKTGIKRLVEVVYPEYV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
DEIVRHGFTHLREALLDYTPKQVAAHLKAQAAKRAVKAKAKVERRATAAAAGEPIKRPPY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
TLVTLHRAVHRDLTRLFEARFPFGLPPKGYRDAWCFDICTAAAWFMTPEELAAEVDRMAD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LCGLKQREARGMMGSLLQRARRAAQGRTDAYGSARSDPRYKSNPAKLVSAHGIERSEMVR
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHH
LDLRILVNAGVRRDREAQRSQNRRAVAGAKPRGDAQAARLALGQRGIAKRGQGMTLAAIA
HHHHHHHHCCCCCCHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCHHHCCCCCEEEEEH
AEEAVSVSQLRKAIREASVVGAIGKTVPKPKQGRPRKADPAPAGMCHDSTGSIDACAQPV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
EPPAAVVPVEQGAYTAPVRCSAPQTATDARCAPTGPAGVVVSDDEPAPAPA
CCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2901768; 1513878 [H]