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The map label for this gene is ygcF [C]

Identifier: 170748800

GI number: 170748800

Start: 2524650

End: 2525282

Strand: Reverse

Name: ygcF [C]

Synonym: Mrad2831_2382

Alternate gene names: 170748800

Gene position: 2525282-2524650 (Counterclockwise)

Preceding gene: 170748805

Following gene: 170748798

Centisome position: 41.55

GC content: 72.83

Gene sequence:

>633_bases
GTGGCTTACGCGGTCAAGGAGATCTTCCACACGCTCCAGGGGGAGGGCGCGCAGGCGGGCCGTGCCGCCGTGTTCTGCCG
CTTCGCCGGATGCAACCTCTGGTCCGGGCGCGAGGCCGATCGCGCCGCCGCGGCCTGCCGGTTCTGCGACACCGACTTCG
TCGGGATGGACGGGGAGGGCGGCGGGCGGTTCGCGGACGCGGCCTCCCTCGCCGACGCGATCGCCGCCACCTGGGCGGGC
GGCGCCGAGAACCGCTACGTCGTCTTCACCGGCGGCGAGCCGCTGCTGCAGCTCGACACGCCGCTGATCGAGGCCGTCCA
CGCGGCCGGGTTCGAGATCGCGATCGAGACCAACGGCACGCTGCCGGCCCCGCCGGGGATCGACTGGATCTGCGTCAGCC
CCAAGGGGAGCAACGCCCTCGCGCAGGTTTCCGGCCACGAGCTGAAGCTCGTCTACCCGCAGGCGGACGCCGATCCGGCG
GCCTTCGTGGGTCTCGCCTTCCAGCACCGCTTCCTCCAGCCCATGGACGGCCCGGACCGGGCCGCCAGCACCGAGGCGGC
GATCGCCTATTGCCGCCGGGACGCCCGCTGGCGGCTCTCGCTGCAGACCCACAAGATGATCGGCATTCCCTGA

Upstream 100 bases:

>100_bases
GTCTGCACGGCGCGGTTGTCGGTGGCCCGCGGGCGCTGCACGGCTTATGTGCAGGCCGGGCGCGCGGGCCGGATCGCGCG
CGGCGGTGACTGGGACGGTT

Downstream 100 bases:

>100_bases
GCGGCCCGGATTCGGTCCCGGGATCGGGTTCGGACGACGTGATCGCCGAGCCGGTGCCGCACGAGGCGCCGGTCCCCTCT
CCCGTGCGGGAGAGGGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MAYAVKEIFHTLQGEGAQAGRAAVFCRFAGCNLWSGREADRAAAACRFCDTDFVGMDGEGGGRFADAASLADAIAATWAG
GAENRYVVFTGGEPLLQLDTPLIEAVHAAGFEIAIETNGTLPAPPGIDWICVSPKGSNALAQVSGHELKLVYPQADADPA
AFVGLAFQHRFLQPMDGPDRAASTEAAIAYCRRDARWRLSLQTHKMIGIP

Sequences:

>Translated_210_residues
MAYAVKEIFHTLQGEGAQAGRAAVFCRFAGCNLWSGREADRAAAACRFCDTDFVGMDGEGGGRFADAASLADAIAATWAG
GAENRYVVFTGGEPLLQLDTPLIEAVHAAGFEIAIETNGTLPAPPGIDWICVSPKGSNALAQVSGHELKLVYPQADADPA
AFVGLAFQHRFLQPMDGPDRAASTEAAIAYCRRDARWRLSLQTHKMIGIP
>Mature_209_residues
AYAVKEIFHTLQGEGAQAGRAAVFCRFAGCNLWSGREADRAAAACRFCDTDFVGMDGEGGGRFADAASLADAIAATWAGG
AENRYVVFTGGEPLLQLDTPLIEAVHAAGFEIAIETNGTLPAPPGIDWICVSPKGSNALAQVSGHELKLVYPQADADPAA
FVGLAFQHRFLQPMDGPDRAASTEAAIAYCRRDARWRLSLQTHKMIGIP

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI1789139, Length=238, Percent_Identity=31.9327731092437, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 22240; Mature: 22109

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYAVKEIFHTLQGEGAQAGRAAVFCRFAGCNLWSGREADRAAAACRFCDTDFVGMDGEG
CCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCC
GGRFADAASLADAIAATWAGGAENRYVVFTGGEPLLQLDTPLIEAVHAAGFEIAIETNGT
CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCHHHHHHHHCCEEEEEECCCC
LPAPPGIDWICVSPKGSNALAQVSGHELKLVYPQADADPAAFVGLAFQHRFLQPMDGPDR
CCCCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC
AASTEAAIAYCRRDARWRLSLQTHKMIGIP
CCCHHHHHHHHHCCCEEEEEEEECEEECCC
>Mature Secondary Structure 
AYAVKEIFHTLQGEGAQAGRAAVFCRFAGCNLWSGREADRAAAACRFCDTDFVGMDGEG
CHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCC
GGRFADAASLADAIAATWAGGAENRYVVFTGGEPLLQLDTPLIEAVHAAGFEIAIETNGT
CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCHHHHHHHHCCEEEEEECCCC
LPAPPGIDWICVSPKGSNALAQVSGHELKLVYPQADADPAAFVGLAFQHRFLQPMDGPDR
CCCCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC
AASTEAAIAYCRRDARWRLSLQTHKMIGIP
CCCHHHHHHHHHCCCEEEEEEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]