| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is phoU [H]
Identifier: 170748758
GI number: 170748758
Start: 2475148
End: 2475867
Strand: Reverse
Name: phoU [H]
Synonym: Mrad2831_2340
Alternate gene names: 170748758
Gene position: 2475867-2475148 (Counterclockwise)
Preceding gene: 170748759
Following gene: 170748757
Centisome position: 40.74
GC content: 68.47
Gene sequence:
>720_bases ATGCCCGGCCATATCGTCACCTCCTACGACACCGACCTGGAGAACCTGCGTCGCTCGATCTCGGAGATGGGCGGCGTCGC CGAGAAGATGACCGCGGAGGCGACCGACGCCCTCGTGCGCCGGGACGACACGCTCGCCCAGGCGGTGATCCTCGCCGACA AGCGCCTCGACGCGCTGCAGCGGGACATCGAGGAGCGCGCCGTGCTGCTGATCGCCCGGCGCCAGCCGCTGGCGATCGAC CTGCGCGAGACCATCTCGGCGATCCGCGTCTCCGGCGATCTCGAGCGGATCGGCGACCTCGCCAAGAACGTCGCCAAGCG CGTGGTGGCGATCTCCGACCAGGCTCCGGCCCAGAAGATCGTGCTCGGCGTGCGCCACATGAGCGACCTCGCCGAGGGCC AGCTCAAGGACGTGCTCGACGCCTACGCGAGCCGCGACGTCCAGGCGGCCCACGACGTCTGGGAGCGCGACGGTGAGATC GACGCCCTGTACAATTCCCTGTTCCGCGAGCTCCTGACCTACATGATGGAGGACCCGCGCAACATCTCGTTCTGCACGCA CCTGCTGTTCTGCGCCAAGAACGTCGAGCGCATCGGCGACCACACCACCAACATCGCCGAGACGATCCACTACCTCGCCA CGGGCGAGACCCTGGCGGGCGACCGGCCGAAGAACGACGCGTCGAACTACGCGACGGTGGACGGACTCCAGGCGCCGTGA
Upstream 100 bases:
>100_bases GCCGCTCCGGTCCCGGGACCGCCGCTCGCGTCTCCGGCGCGTCGGCGGATCCGCAAACCTCCCGGAGGGCCGTCCCCGGG ACCCCATCGAAGGATCCGCC
Downstream 100 bases:
>100_bases GCCCCCGACCCCGGCCTTCCTGCGGGCATGGCCGGGGCCAGTAACCGTGCAGGTTGAGGCCGGGCGGCGCCTCCTGCACC ATCCGCGGGACCGCCGGTAG
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MPGHIVTSYDTDLENLRRSISEMGGVAEKMTAEATDALVRRDDTLAQAVILADKRLDALQRDIEERAVLLIARRQPLAID LRETISAIRVSGDLERIGDLAKNVAKRVVAISDQAPAQKIVLGVRHMSDLAEGQLKDVLDAYASRDVQAAHDVWERDGEI DALYNSLFRELLTYMMEDPRNISFCTHLLFCAKNVERIGDHTTNIAETIHYLATGETLAGDRPKNDASNYATVDGLQAP
Sequences:
>Translated_239_residues MPGHIVTSYDTDLENLRRSISEMGGVAEKMTAEATDALVRRDDTLAQAVILADKRLDALQRDIEERAVLLIARRQPLAID LRETISAIRVSGDLERIGDLAKNVAKRVVAISDQAPAQKIVLGVRHMSDLAEGQLKDVLDAYASRDVQAAHDVWERDGEI DALYNSLFRELLTYMMEDPRNISFCTHLLFCAKNVERIGDHTTNIAETIHYLATGETLAGDRPKNDASNYATVDGLQAP >Mature_238_residues PGHIVTSYDTDLENLRRSISEMGGVAEKMTAEATDALVRRDDTLAQAVILADKRLDALQRDIEERAVLLIARRQPLAIDL RETISAIRVSGDLERIGDLAKNVAKRVVAISDQAPAQKIVLGVRHMSDLAEGQLKDVLDAYASRDVQAAHDVWERDGEID ALYNSLFRELLTYMMEDPRNISFCTHLLFCAKNVERIGDHTTNIAETIHYLATGETLAGDRPKNDASNYATVDGLQAP
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=213, Percent_Identity=35.6807511737089, Blast_Score=140, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26468; Mature: 26337
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGHIVTSYDTDLENLRRSISEMGGVAEKMTAEATDALVRRDDTLAQAVILADKRLDALQ CCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDIEERAVLLIARRQPLAIDLRETISAIRVSGDLERIGDLAKNVAKRVVAISDQAPAQKI HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH VLGVRHMSDLAEGQLKDVLDAYASRDVQAAHDVWERDGEIDALYNSLFRELLTYMMEDPR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC NISFCTHLLFCAKNVERIGDHTTNIAETIHYLATGETLAGDRPKNDASNYATVDGLQAP CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PGHIVTSYDTDLENLRRSISEMGGVAEKMTAEATDALVRRDDTLAQAVILADKRLDALQ CCCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDIEERAVLLIARRQPLAIDLRETISAIRVSGDLERIGDLAKNVAKRVVAISDQAPAQKI HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH VLGVRHMSDLAEGQLKDVLDAYASRDVQAAHDVWERDGEIDALYNSLFRELLTYMMEDPR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC NISFCTHLLFCAKNVERIGDHTTNIAETIHYLATGETLAGDRPKNDASNYATVDGLQAP CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]