| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170748403
Identifier: 170748403
GI number: 170748403
Start: 2113118
End: 2115253
Strand: Reverse
Name: 170748403
Synonym: Mrad2831_1985
Alternate gene names: NA
Gene position: 2115253-2113118 (Counterclockwise)
Preceding gene: 170748404
Following gene: 170748401
Centisome position: 34.8
GC content: 65.64
Gene sequence:
>2136_bases ATGGACGACTGGCTGAAATCCTTCTCCGTCGCGCTCGGCTTTCAGGTCGACACCGGCTCGCTCAACACGGCCAAGAAGTC GATCGCGGACTACGAGGCCGCCGTGAAGGCCGCCGAGAAGCGCATCGAAGACGCCCGCTGGGCTGGGGCGAAGTCCGAGC AGGAAATCGCCAAGCTCACCATGGAGACGAACCTCAAGGAGGCACGCTCCGCCCTGGCGGCCGCCGAGCAGAGGGAGAAG GCCGAGCAGGAGGCTGCGCGGAAGCGGGACGCGCGGCACAAGGAGTTCATGGCCGGCATGTCGAAGCTGGCGCTCGCCGC GACGGCGATGGCGACCGCCGTGAGCTACGCCGTCAACTCCGTGACGCGCTCGTTCGATGGCCTCGGCTTCGTGTCGCAGC GGACGGGCGCGTCCGTGCAGGCGCTCAACTCGCTCGGCTACGCCTTCAAGCAGTTGGGCGGCTCGTCCAACCAAGCTGTC GGCGCCGTGGAGAGCTTTGCGAAGGCCCTGCGCGAGAACAGCGGCATCAAGTCGTTCGTGGAGGGGCTGGGCGTCGACAC GACGAAGGACACGGCGCAACAGCTCCTCGACACGGTGGAGGCGCTGAATAAGGAGCGCTACGACGTAGGCTTCCGATATG CCGGACTGGCTGGCATCTCGGAGGAGAACTACAACCTCATCTCGCGGCAGCTAGGGCAGATCAAAGCCTATCGCGCCGAA TACGACGGGATGACAAAATCGCTCGGCGTGAACAGCAAGGACGCGACTGATGCGTCTATGGCCTTCCAGCGCTCTCTGAA CCGGCTACAGGCCACGGCATCGGCGCTGAGCGACAAGCTGCTCGTCAGCCTCGCGCCAGCCATGAAAGCCATTGTCGACC GCTTTCAGGATTGGATCCGCTCGAACCCTGAGAAGGTCGAGCGCATCATGGACGGCATCTCCAGGGCCGTCGTGTGGGTC GCGGAGAAGATCGGCGCCCTCGTTCAGTCGTTCACCGGGTCGAACGGCGACGAGTTCATGAAGCGCTGGGAGGCGTTTGG GGAACGCGTCCGGCAGTTCGCCGACAACATCGAGCGCATCGCCAACGGGATTGAGAAGATCTCCCGGTTCCTGTCGTGGG CGTCTGGGACCAAGACGCCTCTGGGTGACCCGCAGCGCACGGCCGACATCCTCAACCGGATGACGGCGGAACGCGACGCG GCACCGCGCGACGACCGCCGATGGTACGAGAAAGTCCTACCGAAGGCGCTGGGCGGCAAGGACGCTCCGACTGCGCCGAC AGCTGCCGACGGCGACGGTATGCGGGTGAGGGCTCGGCGTGGCCTGAACCGGCTCGCCCGCAGTGGCAACGTACAGGCCA TCGTCGGCGAGCTGCGACAGGCCGGCTACAAGGACAACGCCATCGCGGCCGTGGTCGGCTCGATGGAGACGGAGAGTAGC TTCAACCCGCGCGCCGCGAACAACCAGAGCGGTGGCCATACCGGCCTGTGGCAGTGGGATCGCAACCGGTGGCCGAGGGT CAAGAATTGGATCCAGAGCCAGGGCGGCGATCCCTACGATGCCGCGTGGCAGACCAAGGCCTGGGTGGCCGAGCACAACG CTAAGCCGGGCGACCCCATGTACGATCATCCACGCACCGCACGAGGTGGCGCGATCCTGCGGAGCAACCCGACGATTGAA GAGGCCATCCACGGTGTGCGCGAAAGCGAGCGGTTCGGCCCCGGTGAGGAAGGCGGTAGGGCGCGCCACGCACGGGAATG GCTGCCGCAGATAGCGCCCGGTGGAACGCTGAGCGACAAGGCAGCCCCGCAATCCGTCGAGATCAAAGCGCCGAAGATCG AGGTGAAGGGGGCTGATGGCTCGACCGCGCCGCCGCAGATCCACGCCCCCGGGCTGCCGCGCGTGATGCAGATGCCGGAC TTCAAGGTCGGCGACTATATGAAGCCGGCACCGGAAGCGTCATCCTCGGTCATCAACAGCGGCGGGAACTCCACGAAAAA CATCTCGCAGACGTTCAATCAGACCACGACGGTCAACGGGGCTGAGAACCCCCGGCAGGCCGCGCGGATCATGGAGAGCG CCTTCAAGGGTATGCACGATCTGGCGCTGCAGAACGTGCAGTCGGCGACGGTGTGA
Upstream 100 bases:
>100_bases CGAGATCCAAGCCGTGGAGGAGACGATGGCGATGGTCCTGTCGGTCACGGCGAGGCTGCAGACGCAGTCCGCTCCCGGCT CGCAGCACTAGGGGGCACCT
Downstream 100 bases:
>100_bases GTCCAAGCGATGACGGCCAAGGGGCTGATGCTGCCGGACGGGATCCTCGATGATGAGGATCAGGAGTAAATCTGCACAAC GAGTTCAGTACAATAGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: Mannosyl-Glycoprotein Endo-Beta-N-Acetylglucosamidase; Lytic Transglycosylase Catalytic
Number of amino acids: Translated: 711; Mature: 711
Protein sequence:
>711_residues MDDWLKSFSVALGFQVDTGSLNTAKKSIADYEAAVKAAEKRIEDARWAGAKSEQEIAKLTMETNLKEARSALAAAEQREK AEQEAARKRDARHKEFMAGMSKLALAATAMATAVSYAVNSVTRSFDGLGFVSQRTGASVQALNSLGYAFKQLGGSSNQAV GAVESFAKALRENSGIKSFVEGLGVDTTKDTAQQLLDTVEALNKERYDVGFRYAGLAGISEENYNLISRQLGQIKAYRAE YDGMTKSLGVNSKDATDASMAFQRSLNRLQATASALSDKLLVSLAPAMKAIVDRFQDWIRSNPEKVERIMDGISRAVVWV AEKIGALVQSFTGSNGDEFMKRWEAFGERVRQFADNIERIANGIEKISRFLSWASGTKTPLGDPQRTADILNRMTAERDA APRDDRRWYEKVLPKALGGKDAPTAPTAADGDGMRVRARRGLNRLARSGNVQAIVGELRQAGYKDNAIAAVVGSMETESS FNPRAANNQSGGHTGLWQWDRNRWPRVKNWIQSQGGDPYDAAWQTKAWVAEHNAKPGDPMYDHPRTARGGAILRSNPTIE EAIHGVRESERFGPGEEGGRARHAREWLPQIAPGGTLSDKAAPQSVEIKAPKIEVKGADGSTAPPQIHAPGLPRVMQMPD FKVGDYMKPAPEASSSVINSGGNSTKNISQTFNQTTTVNGAENPRQAARIMESAFKGMHDLALQNVQSATV
Sequences:
>Translated_711_residues MDDWLKSFSVALGFQVDTGSLNTAKKSIADYEAAVKAAEKRIEDARWAGAKSEQEIAKLTMETNLKEARSALAAAEQREK AEQEAARKRDARHKEFMAGMSKLALAATAMATAVSYAVNSVTRSFDGLGFVSQRTGASVQALNSLGYAFKQLGGSSNQAV GAVESFAKALRENSGIKSFVEGLGVDTTKDTAQQLLDTVEALNKERYDVGFRYAGLAGISEENYNLISRQLGQIKAYRAE YDGMTKSLGVNSKDATDASMAFQRSLNRLQATASALSDKLLVSLAPAMKAIVDRFQDWIRSNPEKVERIMDGISRAVVWV AEKIGALVQSFTGSNGDEFMKRWEAFGERVRQFADNIERIANGIEKISRFLSWASGTKTPLGDPQRTADILNRMTAERDA APRDDRRWYEKVLPKALGGKDAPTAPTAADGDGMRVRARRGLNRLARSGNVQAIVGELRQAGYKDNAIAAVVGSMETESS FNPRAANNQSGGHTGLWQWDRNRWPRVKNWIQSQGGDPYDAAWQTKAWVAEHNAKPGDPMYDHPRTARGGAILRSNPTIE EAIHGVRESERFGPGEEGGRARHAREWLPQIAPGGTLSDKAAPQSVEIKAPKIEVKGADGSTAPPQIHAPGLPRVMQMPD FKVGDYMKPAPEASSSVINSGGNSTKNISQTFNQTTTVNGAENPRQAARIMESAFKGMHDLALQNVQSATV >Mature_711_residues MDDWLKSFSVALGFQVDTGSLNTAKKSIADYEAAVKAAEKRIEDARWAGAKSEQEIAKLTMETNLKEARSALAAAEQREK AEQEAARKRDARHKEFMAGMSKLALAATAMATAVSYAVNSVTRSFDGLGFVSQRTGASVQALNSLGYAFKQLGGSSNQAV GAVESFAKALRENSGIKSFVEGLGVDTTKDTAQQLLDTVEALNKERYDVGFRYAGLAGISEENYNLISRQLGQIKAYRAE YDGMTKSLGVNSKDATDASMAFQRSLNRLQATASALSDKLLVSLAPAMKAIVDRFQDWIRSNPEKVERIMDGISRAVVWV AEKIGALVQSFTGSNGDEFMKRWEAFGERVRQFADNIERIANGIEKISRFLSWASGTKTPLGDPQRTADILNRMTAERDA APRDDRRWYEKVLPKALGGKDAPTAPTAADGDGMRVRARRGLNRLARSGNVQAIVGELRQAGYKDNAIAAVVGSMETESS FNPRAANNQSGGHTGLWQWDRNRWPRVKNWIQSQGGDPYDAAWQTKAWVAEHNAKPGDPMYDHPRTARGGAILRSNPTIE EAIHGVRESERFGPGEEGGRARHAREWLPQIAPGGTLSDKAAPQSVEIKAPKIEVKGADGSTAPPQIHAPGLPRVMQMPD FKVGDYMKPAPEASSSVINSGGNSTKNISQTFNQTTTVNGAENPRQAARIMESAFKGMHDLALQNVQSATV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77268; Mature: 77268
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDWLKSFSVALGFQVDTGSLNTAKKSIADYEAAVKAAEKRIEDARWAGAKSEQEIAKLT CCHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH METNLKEARSALAAAEQREKAEQEAARKRDARHKEFMAGMSKLALAATAMATAVSYAVNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTRSFDGLGFVSQRTGASVQALNSLGYAFKQLGGSSNQAVGAVESFAKALRENSGIKSFV HHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHH EGLGVDTTKDTAQQLLDTVEALNKERYDVGFRYAGLAGISEENYNLISRQLGQIKAYRAE HHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH YDGMTKSLGVNSKDATDASMAFQRSLNRLQATASALSDKLLVSLAPAMKAIVDRFQDWIR HCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNPEKVERIMDGISRAVVWVAEKIGALVQSFTGSNGDEFMKRWEAFGERVRQFADNIERI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ANGIEKISRFLSWASGTKTPLGDPQRTADILNRMTAERDAAPRDDRRWYEKVLPKALGGK HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC DAPTAPTAADGDGMRVRARRGLNRLARSGNVQAIVGELRQAGYKDNAIAAVVGSMETESS CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC FNPRAANNQSGGHTGLWQWDRNRWPRVKNWIQSQGGDPYDAAWQTKAWVAEHNAKPGDPM CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCC YDHPRTARGGAILRSNPTIEEAIHGVRESERFGPGEEGGRARHAREWLPQIAPGGTLSDK CCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC AAPQSVEIKAPKIEVKGADGSTAPPQIHAPGLPRVMQMPDFKVGDYMKPAPEASSSVINS CCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHC GGNSTKNISQTFNQTTTVNGAENPRQAARIMESAFKGMHDLALQNVQSATV CCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDDWLKSFSVALGFQVDTGSLNTAKKSIADYEAAVKAAEKRIEDARWAGAKSEQEIAKLT CCHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH METNLKEARSALAAAEQREKAEQEAARKRDARHKEFMAGMSKLALAATAMATAVSYAVNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTRSFDGLGFVSQRTGASVQALNSLGYAFKQLGGSSNQAVGAVESFAKALRENSGIKSFV HHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHH EGLGVDTTKDTAQQLLDTVEALNKERYDVGFRYAGLAGISEENYNLISRQLGQIKAYRAE HHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHH YDGMTKSLGVNSKDATDASMAFQRSLNRLQATASALSDKLLVSLAPAMKAIVDRFQDWIR HCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNPEKVERIMDGISRAVVWVAEKIGALVQSFTGSNGDEFMKRWEAFGERVRQFADNIERI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ANGIEKISRFLSWASGTKTPLGDPQRTADILNRMTAERDAAPRDDRRWYEKVLPKALGGK HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC DAPTAPTAADGDGMRVRARRGLNRLARSGNVQAIVGELRQAGYKDNAIAAVVGSMETESS CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC FNPRAANNQSGGHTGLWQWDRNRWPRVKNWIQSQGGDPYDAAWQTKAWVAEHNAKPGDPM CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCC YDHPRTARGGAILRSNPTIEEAIHGVRESERFGPGEEGGRARHAREWLPQIAPGGTLSDK CCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC AAPQSVEIKAPKIEVKGADGSTAPPQIHAPGLPRVMQMPDFKVGDYMKPAPEASSSVINS CCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHC GGNSTKNISQTFNQTTTVNGAENPRQAARIMESAFKGMHDLALQNVQSATV CCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA