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The map label for this gene is ydfH [C]

Identifier: 170748388

GI number: 170748388

Start: 2098425

End: 2099102

Strand: Reverse

Name: ydfH [C]

Synonym: Mrad2831_1970

Alternate gene names: 170748388

Gene position: 2099102-2098425 (Counterclockwise)

Preceding gene: 170748390

Following gene: 170748387

Centisome position: 34.54

GC content: 75.96

Gene sequence:

>678_bases
ATGAAGAACCGGACCATCGCGGGTTCGATCGGGACCGAGATCCGGCGGCGCATCCTCGACGGCCGCTACCCGGCGGGCTC
GCAGCTCCGCCAGGACGGACTCGCGGCGGAGTTCGGGGCCAGCCGGATCCCGGTGCGCGAGGCCCTGTTCCAGCTCGAGG
CCGAGGGCCTCGTCCGGATCCTGCCCCATCGCGGCGCCATGGTGGCGCCCCTCTCGCCGGCGGACGCCGCCGAGGCCCTC
GAACTCCGGGGCGCCCTCGAGCCGCGCCTCCTGGCCCTCTCGGCGCCCCGCCTGACCGCCGACGACTTCGCCCGGGCCGA
CGCCCTGCTGGAGGAGTACGCCGCGGCCCTGCGGGCGGGCGCGACGGCGCGCTGGGGCGCCCTCAACACCGAGCTGCACC
TCCTCCTCTACAGCCGGGCGGAGCGTCCCCGCGCCCTCGGGCTGGTCGGCTCCCTGCTGGCCGAGTGCGACCGCTACACC
CGCCTCCAGCTCTCCACCGACGGCGCCGAGCTGGAGCGGGCCGACCGCGAGCACCGCGAGATCGTCCGGCTGTGCCGGAA
CGGCCACGTCTCGGCCGCCCGCGCCCTCCTGACCGACCATATCGACCACGTCGCCGCCGCGCTGATGGCGTTCCTCGGGG
CCGCGCCCGGCCCGGCCCGCGAGACAGGGATTGTATAA

Upstream 100 bases:

>100_bases
TGATCGAGCCCGTTGCCCGATTGATTTTATACAATTTCAACACCGGAGCTCCGTCGTCAAGGGTCCTGCGGAGCACCGGG
AGCCGACCGGGAGCGAGACG

Downstream 100 bases:

>100_bases
AATCCTTGCCAGACTCGCGCGGCGCTGCCATGGAGGGGCGTGCCGCCCCGCGAGGCCCGCAAGGCCGGCCGGGACGATCC
CACCTCCCAGCAGGCGAGCC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR Family Regulatory Protein; GntR Family Regulatory; Transcription Regulator Protein; Transcription Regulator; Regulator PutR For Proline Utilization GntR Family; Transcriptional Regulator GntR Family Protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKNRTIAGSIGTEIRRRILDGRYPAGSQLRQDGLAAEFGASRIPVREALFQLEAEGLVRILPHRGAMVAPLSPADAAEAL
ELRGALEPRLLALSAPRLTADDFARADALLEEYAAALRAGATARWGALNTELHLLLYSRAERPRALGLVGSLLAECDRYT
RLQLSTDGAELERADREHREIVRLCRNGHVSAARALLTDHIDHVAAALMAFLGAAPGPARETGIV

Sequences:

>Translated_225_residues
MKNRTIAGSIGTEIRRRILDGRYPAGSQLRQDGLAAEFGASRIPVREALFQLEAEGLVRILPHRGAMVAPLSPADAAEAL
ELRGALEPRLLALSAPRLTADDFARADALLEEYAAALRAGATARWGALNTELHLLLYSRAERPRALGLVGSLLAECDRYT
RLQLSTDGAELERADREHREIVRLCRNGHVSAARALLTDHIDHVAAALMAFLGAAPGPARETGIV
>Mature_225_residues
MKNRTIAGSIGTEIRRRILDGRYPAGSQLRQDGLAAEFGASRIPVREALFQLEAEGLVRILPHRGAMVAPLSPADAAEAL
ELRGALEPRLLALSAPRLTADDFARADALLEEYAAALRAGATARWGALNTELHLLLYSRAERPRALGLVGSLLAECDRYT
RLQLSTDGAELERADREHREIVRLCRNGHVSAARALLTDHIDHVAAALMAFLGAAPGPARETGIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24264; Mature: 24264

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRTIAGSIGTEIRRRILDGRYPAGSQLRQDGLAAEFGASRIPVREALFQLEAEGLVRI
CCCCEECCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCHHEE
LPHRGAMVAPLSPADAAEALELRGALEPRLLALSAPRLTADDFARADALLEEYAAALRAG
CCCCCCEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
ATARWGALNTELHLLLYSRAERPRALGLVGSLLAECDRYTRLQLSTDGAELERADREHRE
CCCCCCCCCHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
IVRLCRNGHVSAARALLTDHIDHVAAALMAFLGAAPGPARETGIV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKNRTIAGSIGTEIRRRILDGRYPAGSQLRQDGLAAEFGASRIPVREALFQLEAEGLVRI
CCCCEECCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCHHEE
LPHRGAMVAPLSPADAAEALELRGALEPRLLALSAPRLTADDFARADALLEEYAAALRAG
CCCCCCEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
ATARWGALNTELHLLLYSRAERPRALGLVGSLLAECDRYTRLQLSTDGAELERADREHRE
CCCCCCCCCHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
IVRLCRNGHVSAARALLTDHIDHVAAALMAFLGAAPGPARETGIV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA