| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170748354
Identifier: 170748354
GI number: 170748354
Start: 2059449
End: 2060678
Strand: Reverse
Name: 170748354
Synonym: Mrad2831_1936
Alternate gene names: NA
Gene position: 2060678-2059449 (Counterclockwise)
Preceding gene: 170748355
Following gene: 170748352
Centisome position: 33.9
GC content: 70.41
Gene sequence:
>1230_bases ATGACGCTCCGCCACCGCGCCGCGGCGCTGCTCGGGAGTCTGTGCGCGCTCGGCGCCGGCGCGGCGCTCGCGGCCGACCT CGTGCCGGTGAAGATCGGCGTGCTGAACGACCGCTCCGGCGTCTACTTCGACTCCACCGGCGAGGGCTCGGTGGTCGCCG CCCGGATGGCGGTCGAGGATTTCAAGCCGGAGGCGCACGGGCTGAAGGTCGAGGTCGTCGCCGCCGACCACCAGAACAAG CCCGATGTCGGCGCCTCCATCACCCGGCAATGGTACGACCGCGACGGCGTCGACGCGGTGTTCGACGTCCCCACCTCCTC GGTGGCGCTCGCCATCGCGCAGATCACCAAGGAGAAGAACAAGGCCTTCATCAACTCGGGCGGCGGCACCGCCGACCTGA CCGGCCCGGCCTGCACGCCCAACACCGTGCACTGGACCTACGACACCGCGGCGCTGGCCAACGGCACCGGCAAGGCCATC CTCAAGCGCGGCGGCAAGTCCTGGTACTTCATCACCGCCGACTACGCCTTCGGCCTCGCCCTGGAGCGCGACACCAAGGC GGTGGTGGAGAAGAACGGCGGCAAGGTCGTCGGCGGCGTGCGCACGCCGTTCCCGAACCCGGACTTCTCCTCGTTCCTCC TCCAGGCCCAGGCCTCGGGCGCGCAGGTGATCGGGCTGGCCGATGCCGGCCTCGACGCCGCCAACGCCATCAAGCAGGCG CACGAGTTCGGCATCCGCCAGGGCGGCCAGACGCTCGCGGCCCTGCTGATCGCCATCACCGACATCCACTCGCTGGGCCT GGACGTGGCGCAGGGCCTCGCCTTCACCGCCTCGTTCTACTGGGACCTCAACGACGGCACCCGGGCCTTCGCGGAGCGGT TCGAGAAGCGCATGCCCGGCAAGAAGCCGACCTCGTACCAGGCGGGCGTCTACGCCAGCACGCTCCACTACCTGAAGGCG GTGGCGGCCCTGCACTCGGCCAGGGACGGCGCCGCCGTGGTCGCCAAGATGAAGGAGCTGCCGACCGACGACCCGCTGTT CGGCAAGGGCACGATCCGGCCGGACGGGCGCAAGATCCACCCGATGTACCTGTTCGAGGCCAAGGCGCCCGCCGAGTCGA AGGGCGCGTGGGACCTCTACAAGGTGCTCGAGACGATCCCGGCCGAGCAGGCGTTCCGCCCGATGAGCGAGGGCGGCTGC CCGATGCTCGCCGATATGACGGCGAAGTAG
Upstream 100 bases:
>100_bases CGCACCCGTTCCAGCCGCGATCCGCCACGGATAGTCTGTCTTCGGAAACGTCCCGAGCGGCGATCAACGCGGCCGGGAGA GATTCGACAGGGAGAGAGAC
Downstream 100 bases:
>100_bases GCGCCGGGTCGATCGTTGCGGCACCGCCGTCCTTGCGAGTGGAGCGAGGCACTCCAGACAGCGCGACGCCGACCGTCGTC GCGCGGCCCTGGGTCACTTC
Product: extracellular ligand-binding receptor
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MTLRHRAAALLGSLCALGAGAALAADLVPVKIGVLNDRSGVYFDSTGEGSVVAARMAVEDFKPEAHGLKVEVVAADHQNK PDVGASITRQWYDRDGVDAVFDVPTSSVALAIAQITKEKNKAFINSGGGTADLTGPACTPNTVHWTYDTAALANGTGKAI LKRGGKSWYFITADYAFGLALERDTKAVVEKNGGKVVGGVRTPFPNPDFSSFLLQAQASGAQVIGLADAGLDAANAIKQA HEFGIRQGGQTLAALLIAITDIHSLGLDVAQGLAFTASFYWDLNDGTRAFAERFEKRMPGKKPTSYQAGVYASTLHYLKA VAALHSARDGAAVVAKMKELPTDDPLFGKGTIRPDGRKIHPMYLFEAKAPAESKGAWDLYKVLETIPAEQAFRPMSEGGC PMLADMTAK
Sequences:
>Translated_409_residues MTLRHRAAALLGSLCALGAGAALAADLVPVKIGVLNDRSGVYFDSTGEGSVVAARMAVEDFKPEAHGLKVEVVAADHQNK PDVGASITRQWYDRDGVDAVFDVPTSSVALAIAQITKEKNKAFINSGGGTADLTGPACTPNTVHWTYDTAALANGTGKAI LKRGGKSWYFITADYAFGLALERDTKAVVEKNGGKVVGGVRTPFPNPDFSSFLLQAQASGAQVIGLADAGLDAANAIKQA HEFGIRQGGQTLAALLIAITDIHSLGLDVAQGLAFTASFYWDLNDGTRAFAERFEKRMPGKKPTSYQAGVYASTLHYLKA VAALHSARDGAAVVAKMKELPTDDPLFGKGTIRPDGRKIHPMYLFEAKAPAESKGAWDLYKVLETIPAEQAFRPMSEGGC PMLADMTAK >Mature_408_residues TLRHRAAALLGSLCALGAGAALAADLVPVKIGVLNDRSGVYFDSTGEGSVVAARMAVEDFKPEAHGLKVEVVAADHQNKP DVGASITRQWYDRDGVDAVFDVPTSSVALAIAQITKEKNKAFINSGGGTADLTGPACTPNTVHWTYDTAALANGTGKAIL KRGGKSWYFITADYAFGLALERDTKAVVEKNGGKVVGGVRTPFPNPDFSSFLLQAQASGAQVIGLADAGLDAANAIKQAH EFGIRQGGQTLAALLIAITDIHSLGLDVAQGLAFTASFYWDLNDGTRAFAERFEKRMPGKKPTSYQAGVYASTLHYLKAV AALHSARDGAAVVAKMKELPTDDPLFGKGTIRPDGRKIHPMYLFEAKAPAESKGAWDLYKVLETIPAEQAFRPMSEGGCP MLADMTAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43213; Mature: 43081
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRHRAAALLGSLCALGAGAALAADLVPVKIGVLNDRSGVYFDSTGEGSVVAARMAVED CCCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEEECCCCEEECCCCCCCEEEEEHHHHH FKPEAHGLKVEVVAADHQNKPDVGASITRQWYDRDGVDAVFDVPTSSVALAIAQITKEKN CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHC KAFINSGGGTADLTGPACTPNTVHWTYDTAALANGTGKAILKRGGKSWYFITADYAFGLA CEEEECCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCHHHHHCCCCEEEEEEECCEEEEE LERDTKAVVEKNGGKVVGGVRTPFPNPDFSSFLLQAQASGAQVIGLADAGLDAANAIKQA ECCCCHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH HEFGIRQGGQTLAALLIAITDIHSLGLDVAQGLAFTASFYWDLNDGTRAFAERFEKRMPG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHCCC KKPTSYQAGVYASTLHYLKAVAALHSARDGAAVVAKMKELPTDDPLFGKGTIRPDGRKIH CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEC PMYLFEAKAPAESKGAWDLYKVLETIPAEQAFRPMSEGGCPMLADMTAK EEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCEECCCCCC >Mature Secondary Structure TLRHRAAALLGSLCALGAGAALAADLVPVKIGVLNDRSGVYFDSTGEGSVVAARMAVED CCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEEECCCCEEECCCCCCCEEEEEHHHHH FKPEAHGLKVEVVAADHQNKPDVGASITRQWYDRDGVDAVFDVPTSSVALAIAQITKEKN CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHC KAFINSGGGTADLTGPACTPNTVHWTYDTAALANGTGKAILKRGGKSWYFITADYAFGLA CEEEECCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCHHHHHCCCCEEEEEEECCEEEEE LERDTKAVVEKNGGKVVGGVRTPFPNPDFSSFLLQAQASGAQVIGLADAGLDAANAIKQA ECCCCHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH HEFGIRQGGQTLAALLIAITDIHSLGLDVAQGLAFTASFYWDLNDGTRAFAERFEKRMPG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHCCC KKPTSYQAGVYASTLHYLKAVAALHSARDGAAVVAKMKELPTDDPLFGKGTIRPDGRKIH CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEC PMYLFEAKAPAESKGAWDLYKVLETIPAEQAFRPMSEGGCPMLADMTAK EEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA