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The map label for this gene is yafK [H]

Identifier: 170748277

GI number: 170748277

Start: 1987925

End: 1989439

Strand: Reverse

Name: yafK [H]

Synonym: Mrad2831_1859

Alternate gene names: 170748277

Gene position: 1989439-1987925 (Counterclockwise)

Preceding gene: 170748279

Following gene: 170748267

Centisome position: 32.73

GC content: 73.4

Gene sequence:

>1515_bases
ATGACGGCGCGTCTCGCGACCGCGCGACTGCTGGCGGCGGCGTCCCTGCTGGCCCTGTCGCTCGCCGCCTGCCAGGACGG
TTCCGGGATCAACGGCCCGAGCGCGCGCAGCCTCGCGCCGATCGCCCCCCAAACCGTCGCGCTGATGCAGTCCAAGGGGA
TGCAGCCCTCCGACCCGATCCTGATCCGCACCTTCAAGAAGGAGGCGGAGATGGAGATCTGGAAGCGGGGGAGCGACGGC
CGCTACGCCCTGATGAAGACCTACCCGATCTGCCGCTGGTCCGGCCAGCTCGGGCCGAAGACCCGCGAGGGCGACCGGCA
GGCGCCCGAGGGCTTCTACACGATCACCCCGGGCCTGATGAACCCGAACTCCTCGTACTACCTGTCGTTCGACACCGGCT
TCCCGAACGCCGTCGACCGGGCCAACGGGCGCACCGGCAAGTACCTGATGGTGCACGGCACCTGCTCGTCGGCGGGCTGC
TTCGCCATGACCGACGCCACCATCGCGGAGATCTACGCCGTCGCCCGCGACGCGTTCATCGGCGGCCAGCGCAGCTTCCA
GTTCCAGTCCTACCCGTTCCGGATGACGGCCGAGAACATGGCCAAGTTCCGCAACGACCCGAACATCGCCTTCTGGCAGA
ACCTCAAGGAGGGGTCCGACTATTTCGAGGCCCTGCACGAGGAGCCGAAGGTCGGCCAGTGCGGGACCAAGTACGTGTTC
GGCGGGGCCGACGCGGCCGCCGGCGCGTGCCGGCCGCACGTCGACCCGCTGGTGGCCGAGAAGAGCGCGCACGACGCCCG
CGCGGTCGCCGACCTCGTCGCCAAGGGCACGCCCGCGGTGCGGGTCGTCTACCAGGACGGCGGCCAGAACCCGGTCTTCC
GCCCGCAGAACGCCAGCGCCTTCGCGAGCCTCGGCGGCACCGAGACGGTGCTGCCCTACGACGCCAAGGAGTACGGCCGG
CACAATCTCGGCGACGTGAGCCGCCCCGAGACCCTGGCGGCGGGCCCGCAGGAGATCGAGGTCGGCCCGAAGGGCCGGCC
CACGATGCTGGCCGGCGCCGAGCCGGAGGTGCCCGCCCGGGCCGCGAAGGCCGGCGGCAAGGGGCACGGGCGCGAGCCGG
CGGCGCCCGCGGCGCCCACGACCCTCATGGCGAACCGCGCCGATCCCGGCGCGCAGGTCGAGACCACGGCGGCCCTGCCC
GACAAGCCCGCCCGGATCGCCGTCGCGGACGCGGACGGCGATGCGAGCAGCTACCAGAAGCTGTTCGGTCAGCTCTTCGC
CAAGGACAAGCCGGCCCCGGCGGCGCCCCCGGCCCCTCCGGTCGACGCCGCGGCGGCGCCGGAGCCGGCGAAGCTCGCCC
ACGCCGCCGAGACGGGCGCGCCGCGGGCCGCCAAGGCCCACGCGGTGAGGACCGCCAGGGTCGAGGCGAAGGGCGACGGG
AAGGGGAAGGGTGACGGGAAGGCGGAGGCGAAGCCCGCCCTCCGGAAGGGCGAGCCCGAGGGCCGGAAGCCCTGA

Upstream 100 bases:

>100_bases
GTAAGGAAGGCGCAAGCTTAACGAGCCTATTGGGTTGGGGAGTGGCACCCGACGCGGCCAGCAAGGCCCGCGGGCGCGCG
TAAGACGATCGAGGTTCCCC

Downstream 100 bases:

>100_bases
CGGCTCAGACCAGCGGACGGTCGCGGTTCATCAGCCACAGGGCGTGGACCGTGCCGGGCAGCCAGCCGAGGATCCACAGC
AGGATGTTCAGCAGGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MTARLATARLLAAASLLALSLAACQDGSGINGPSARSLAPIAPQTVALMQSKGMQPSDPILIRTFKKEAEMEIWKRGSDG
RYALMKTYPICRWSGQLGPKTREGDRQAPEGFYTITPGLMNPNSSYYLSFDTGFPNAVDRANGRTGKYLMVHGTCSSAGC
FAMTDATIAEIYAVARDAFIGGQRSFQFQSYPFRMTAENMAKFRNDPNIAFWQNLKEGSDYFEALHEEPKVGQCGTKYVF
GGADAAAGACRPHVDPLVAEKSAHDARAVADLVAKGTPAVRVVYQDGGQNPVFRPQNASAFASLGGTETVLPYDAKEYGR
HNLGDVSRPETLAAGPQEIEVGPKGRPTMLAGAEPEVPARAAKAGGKGHGREPAAPAAPTTLMANRADPGAQVETTAALP
DKPARIAVADADGDASSYQKLFGQLFAKDKPAPAAPPAPPVDAAAAPEPAKLAHAAETGAPRAAKAHAVRTARVEAKGDG
KGKGDGKAEAKPALRKGEPEGRKP

Sequences:

>Translated_504_residues
MTARLATARLLAAASLLALSLAACQDGSGINGPSARSLAPIAPQTVALMQSKGMQPSDPILIRTFKKEAEMEIWKRGSDG
RYALMKTYPICRWSGQLGPKTREGDRQAPEGFYTITPGLMNPNSSYYLSFDTGFPNAVDRANGRTGKYLMVHGTCSSAGC
FAMTDATIAEIYAVARDAFIGGQRSFQFQSYPFRMTAENMAKFRNDPNIAFWQNLKEGSDYFEALHEEPKVGQCGTKYVF
GGADAAAGACRPHVDPLVAEKSAHDARAVADLVAKGTPAVRVVYQDGGQNPVFRPQNASAFASLGGTETVLPYDAKEYGR
HNLGDVSRPETLAAGPQEIEVGPKGRPTMLAGAEPEVPARAAKAGGKGHGREPAAPAAPTTLMANRADPGAQVETTAALP
DKPARIAVADADGDASSYQKLFGQLFAKDKPAPAAPPAPPVDAAAAPEPAKLAHAAETGAPRAAKAHAVRTARVEAKGDG
KGKGDGKAEAKPALRKGEPEGRKP
>Mature_503_residues
TARLATARLLAAASLLALSLAACQDGSGINGPSARSLAPIAPQTVALMQSKGMQPSDPILIRTFKKEAEMEIWKRGSDGR
YALMKTYPICRWSGQLGPKTREGDRQAPEGFYTITPGLMNPNSSYYLSFDTGFPNAVDRANGRTGKYLMVHGTCSSAGCF
AMTDATIAEIYAVARDAFIGGQRSFQFQSYPFRMTAENMAKFRNDPNIAFWQNLKEGSDYFEALHEEPKVGQCGTKYVFG
GADAAAGACRPHVDPLVAEKSAHDARAVADLVAKGTPAVRVVYQDGGQNPVFRPQNASAFASLGGTETVLPYDAKEYGRH
NLGDVSRPETLAAGPQEIEVGPKGRPTMLAGAEPEVPARAAKAGGKGHGREPAAPAAPTTLMANRADPGAQVETTAALPD
KPARIAVADADGDASSYQKLFGQLFAKDKPAPAAPPAPPVDAAAAPEPAKLAHAAETGAPRAAKAHAVRTARVEAKGDGK
GKGDGKAEAKPALRKGEPEGRKP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1786418, Length=226, Percent_Identity=40.2654867256637, Blast_Score=182, Evalue=5e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 52909; Mature: 52778

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARLATARLLAAASLLALSLAACQDGSGINGPSARSLAPIAPQTVALMQSKGMQPSDPI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCE
LIRTFKKEAEMEIWKRGSDGRYALMKTYPICRWSGQLGPKTREGDRQAPEGFYTITPGLM
EEEEHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCEEEECCCCC
NPNSSYYLSFDTGFPNAVDRANGRTGKYLMVHGTCSSAGCFAMTDATIAEIYAVARDAFI
CCCCCEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHC
GGQRSFQFQSYPFRMTAENMAKFRNDPNIAFWQNLKEGSDYFEALHEEPKVGQCGTKYVF
CCCCCCEECCCCEEECHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEE
GGADAAAGACRPHVDPLVAEKSAHDARAVADLVAKGTPAVRVVYQDGGQNPVFRPQNASA
CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHH
FASLGGTETVLPYDAKEYGRHNLGDVSRPETLAAGPQEIEVGPKGRPTMLAGAEPEVPAR
HHHCCCCCEECCCCHHHHCCCCCCCCCCCHHHCCCCCEEEECCCCCCEEEECCCCCCCHH
AAKAGGKGHGREPAAPAAPTTLMANRADPGAQVETTAALPDKPARIAVADADGDASSYQK
HHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHH
LFGQLFAKDKPAPAAPPAPPVDAAAAPEPAKLAHAAETGAPRAAKAHAVRTARVEAKGDG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCC
KGKGDGKAEAKPALRKGEPEGRKP
CCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
TARLATARLLAAASLLALSLAACQDGSGINGPSARSLAPIAPQTVALMQSKGMQPSDPI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCE
LIRTFKKEAEMEIWKRGSDGRYALMKTYPICRWSGQLGPKTREGDRQAPEGFYTITPGLM
EEEEHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCEEEECCCCC
NPNSSYYLSFDTGFPNAVDRANGRTGKYLMVHGTCSSAGCFAMTDATIAEIYAVARDAFI
CCCCCEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHC
GGQRSFQFQSYPFRMTAENMAKFRNDPNIAFWQNLKEGSDYFEALHEEPKVGQCGTKYVF
CCCCCCEECCCCEEECHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEE
GGADAAAGACRPHVDPLVAEKSAHDARAVADLVAKGTPAVRVVYQDGGQNPVFRPQNASA
CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHH
FASLGGTETVLPYDAKEYGRHNLGDVSRPETLAAGPQEIEVGPKGRPTMLAGAEPEVPAR
HHHCCCCCEECCCCHHHHCCCCCCCCCCCHHHCCCCCEEEECCCCCCEEEECCCCCCCHH
AAKAGGKGHGREPAAPAAPTTLMANRADPGAQVETTAALPDKPARIAVADADGDASSYQK
HHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHH
LFGQLFAKDKPAPAAPPAPPVDAAAAPEPAKLAHAAETGAPRAAKAHAVRTARVEAKGDG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCC
KGKGDGKAEAKPALRKGEPEGRKP
CCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]