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The map label for this gene is flgF [H]

Identifier: 170748127

GI number: 170748127

Start: 1817675

End: 1818415

Strand: Reverse

Name: flgF [H]

Synonym: Mrad2831_1709

Alternate gene names: 170748127

Gene position: 1818415-1817675 (Counterclockwise)

Preceding gene: 170748128

Following gene: 170748126

Centisome position: 29.92

GC content: 70.99

Gene sequence:

>741_bases
ATGCAGTCGTCGCTCTACGTCACGCTGTCCGCCCAGATGGCGCTCGAGCAGCGCCTGAACACGGTGGCCGCCAACGTCGC
CAATCTCGGGACGGTCGGGTACCGGGCGGAAGAGGTGAAGTTCGAGACGATCCTGTCCCAAGCGGGTCACCGCGACGTCG
CCTTCGCGACGCCGGGCGAGACGTTCCTCTCACGCAAGGCCGGCCCGCTGATCAAGACGGATTCCCCGCTCGATGTCGGC
CTTCAGGGCGACGGCTGGCTGGCCGTGCGCGGGCCGCGGGGCATGGTCTACACGCGGGACGGCCGCATGCAGGTCACGGC
CGCCGGCGACCTTCAGGATCTCGACGGGCGCGCCATCCTGGATCCCGGCGGGTCGCCGCTGACCGTCGACCCGGAAGGGC
CGCCGCTCACGATCGGCCAGGACGGGATCGTCTCCCAGGGCACCAACCAGATCGGGGCGCTCGGCGTGTTCCGGCTGGAC
CCCGCCGCGAAGCTGACGCGCGTCGCCGGCGGCGCGGTGGCGTCCGACGTTCCGGGCCGGCCGATCCTCGACTTCAACCA
GCGCGACGAGACGACGGTCCGGGTCCAGCAGGGCTTCCAAGAGGGCGCCAACGTCAATCCGGTCATGGAGATGTCGCGGC
TCATCGAGATCACGCGCGCTTTCCAGAGCGCGGCGGCCGCGGTGGCGGAATCGGAATCGTCGCTGCAGGACGCCATCCGC
GGCCTCGGCCCGACCGCGTGA

Upstream 100 bases:

>100_bases
GCGGCACAGCCCGCACTCTCACTGTTCGGCGGAGCCGACGGCGGCTTCGACACCGGTGTCCTGCTCAAGCTGCAATCCAT
CCGGCTCGGGGGCCACTGAC

Downstream 100 bases:

>100_bases
GCCGCCCTCGCTCCCGTCCTGACCTCCGGGAAACCGCATGAACGCCCTCGACCGCGTCGCCGCCATGCTGGGGCGTCGGG
ACGATCCCCCCCTCATCCGG

Product: flagellar basal body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MQSSLYVTLSAQMALEQRLNTVAANVANLGTVGYRAEEVKFETILSQAGHRDVAFATPGETFLSRKAGPLIKTDSPLDVG
LQGDGWLAVRGPRGMVYTRDGRMQVTAAGDLQDLDGRAILDPGGSPLTVDPEGPPLTIGQDGIVSQGTNQIGALGVFRLD
PAAKLTRVAGGAVASDVPGRPILDFNQRDETTVRVQQGFQEGANVNPVMEMSRLIEITRAFQSAAAAVAESESSLQDAIR
GLGPTA

Sequences:

>Translated_246_residues
MQSSLYVTLSAQMALEQRLNTVAANVANLGTVGYRAEEVKFETILSQAGHRDVAFATPGETFLSRKAGPLIKTDSPLDVG
LQGDGWLAVRGPRGMVYTRDGRMQVTAAGDLQDLDGRAILDPGGSPLTVDPEGPPLTIGQDGIVSQGTNQIGALGVFRLD
PAAKLTRVAGGAVASDVPGRPILDFNQRDETTVRVQQGFQEGANVNPVMEMSRLIEITRAFQSAAAAVAESESSLQDAIR
GLGPTA
>Mature_246_residues
MQSSLYVTLSAQMALEQRLNTVAANVANLGTVGYRAEEVKFETILSQAGHRDVAFATPGETFLSRKAGPLIKTDSPLDVG
LQGDGWLAVRGPRGMVYTRDGRMQVTAAGDLQDLDGRAILDPGGSPLTVDPEGPPLTIGQDGIVSQGTNQIGALGVFRLD
PAAKLTRVAGGAVASDVPGRPILDFNQRDETTVRVQQGFQEGANVNPVMEMSRLIEITRAFQSAAAAVAESESSLQDAIR
GLGPTA

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=250, Percent_Identity=31.2, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787318, Length=268, Percent_Identity=26.4925373134328, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25828; Mature: 25828

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSLYVTLSAQMALEQRLNTVAANVANLGTVGYRAEEVKFETILSQAGHRDVAFATPGE
CCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCH
TFLSRKAGPLIKTDSPLDVGLQGDGWLAVRGPRGMVYTRDGRMQVTAAGDLQDLDGRAIL
HHHHCCCCCCEECCCCCEECCCCCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCCEEE
DPGGSPLTVDPEGPPLTIGQDGIVSQGTNQIGALGVFRLDPAAKLTRVAGGAVASDVPGR
CCCCCEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCHHCCCCCC
PILDFNQRDETTVRVQQGFQEGANVNPVMEMSRLIEITRAFQSAAAAVAESESSLQDAIR
CEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGPTA
CCCCCC
>Mature Secondary Structure
MQSSLYVTLSAQMALEQRLNTVAANVANLGTVGYRAEEVKFETILSQAGHRDVAFATPGE
CCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCH
TFLSRKAGPLIKTDSPLDVGLQGDGWLAVRGPRGMVYTRDGRMQVTAAGDLQDLDGRAIL
HHHHCCCCCCEECCCCCEECCCCCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCCEEE
DPGGSPLTVDPEGPPLTIGQDGIVSQGTNQIGALGVFRLDPAAKLTRVAGGAVASDVPGR
CCCCCEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCHHCCCCCC
PILDFNQRDETTVRVQQGFQEGANVNPVMEMSRLIEITRAFQSAAAAVAESESSLQDAIR
CEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGPTA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]