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The map label for this gene is fliR [H]

Identifier: 170748117

GI number: 170748117

Start: 1807499

End: 1808245

Strand: Reverse

Name: fliR [H]

Synonym: Mrad2831_1699

Alternate gene names: 170748117

Gene position: 1808245-1807499 (Counterclockwise)

Preceding gene: 170748118

Following gene: 170748116

Centisome position: 29.75

GC content: 67.47

Gene sequence:

>747_bases
ATGAGTCCCGACACGATCCTGGGCGTCTTCGTCATCTTCTGCCGTGTCGGCGGCTGCCTGCTGGTCGCTCCGGGACTCTC
CAGCGCGCGGGTGGCGCCGCGCATCCGCCTGCTCGTCGCCCTGACCGTGACCCTCGCGGTGGCGCCGCTGCTGCTGCCGA
GATTCGGCGCCGGGCTGCGCGACGCCGCGCCGGTCGACATCCTGTGGTGGATCGGGTGCGAGACGCTCACGGGCCTCGCG
ATCGGCTTCTTCGGCCGGTCCTTCTATTTCGCCCTCGAGACGTTGGCGAGCGGCGTGGCGACGATGATCGGCCTCGGGGG
CATTCCGGGGAATCCGGTGGCCGATACCGAGGCCGCCTCCCTCGCCGGGTCGCTGATCGTGATGGCCGCGACGATCCTGG
TCTTCGCCCTGGACCTGCACTGGGAACTCTTCCGCGGGCTGATCGCCTCGTACGACCGGATCCCGCCCGGACATCCCTTC
GGATCGCGGCTGATGCTGGCCGGCCTGGTCGATCGGACCGGGGCGGCCTTCGCCATGGCCCTGCGCGTGACGAGCCCGTT
CATCATCTATTCCGTGATCGTGAATCTCGCCCTCGGACTCGCCAACAAGCTCACGCCGCAGATCCCGGTCTTCTTCATCG
CCACACCCTTCATCCTCTTCGGCGGCCTCGCGATCCTCCTGTTCCTCTCGAATGATCTGCTCGGGCAGTTCATCCTCGAC
TACGAACACTGGCTCAGACGAGGCTGA

Upstream 100 bases:

>100_bases
GATCATCGAGCGGCTGTTCCCGACGGTCGCGGTCCTGTCGCACGTGGAGATCGCGCGCGGGGTCGAGATCAAGTCGCTCG
GCACGATCTCCTGACAGCCG

Downstream 100 bases:

>100_bases
CATGCAGACACGGCTCCGCCGGGCGAGGCGCCTCGTCCGCCTGCAGGATCGGATGCACCGGCTCGCCGAGCGGGAGCTGG
CCGTCGCGGAGCACCGGGTT

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSPDTILGVFVIFCRVGGCLLVAPGLSSARVAPRIRLLVALTVTLAVAPLLLPRFGAGLRDAAPVDILWWIGCETLTGLA
IGFFGRSFYFALETLASGVATMIGLGGIPGNPVADTEAASLAGSLIVMAATILVFALDLHWELFRGLIASYDRIPPGHPF
GSRLMLAGLVDRTGAAFAMALRVTSPFIIYSVIVNLALGLANKLTPQIPVFFIATPFILFGGLAILLFLSNDLLGQFILD
YEHWLRRG

Sequences:

>Translated_248_residues
MSPDTILGVFVIFCRVGGCLLVAPGLSSARVAPRIRLLVALTVTLAVAPLLLPRFGAGLRDAAPVDILWWIGCETLTGLA
IGFFGRSFYFALETLASGVATMIGLGGIPGNPVADTEAASLAGSLIVMAATILVFALDLHWELFRGLIASYDRIPPGHPF
GSRLMLAGLVDRTGAAFAMALRVTSPFIIYSVIVNLALGLANKLTPQIPVFFIATPFILFGGLAILLFLSNDLLGQFILD
YEHWLRRG
>Mature_247_residues
SPDTILGVFVIFCRVGGCLLVAPGLSSARVAPRIRLLVALTVTLAVAPLLLPRFGAGLRDAAPVDILWWIGCETLTGLAI
GFFGRSFYFALETLASGVATMIGLGGIPGNPVADTEAASLAGSLIVMAATILVFALDLHWELFRGLIASYDRIPPGHPFG
SRLMLAGLVDRTGAAFAMALRVTSPFIIYSVIVNLALGLANKLTPQIPVFFIATPFILFGGLAILLFLSNDLLGQFILDY
EHWLRRG

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 26383; Mature: 26252

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPDTILGVFVIFCRVGGCLLVAPGLSSARVAPRIRLLVALTVTLAVAPLLLPRFGAGLR
CCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DAAPVDILWWIGCETLTGLAIGFFGRSFYFALETLASGVATMIGLGGIPGNPVADTEAAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
LAGSLIVMAATILVFALDLHWELFRGLIASYDRIPPGHPFGSRLMLAGLVDRTGAAFAMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
LRVTSPFIIYSVIVNLALGLANKLTPQIPVFFIATPFILFGGLAILLFLSNDLLGQFILD
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEHWLRRG
HHHHHHCC
>Mature Secondary Structure 
SPDTILGVFVIFCRVGGCLLVAPGLSSARVAPRIRLLVALTVTLAVAPLLLPRFGAGLR
CCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DAAPVDILWWIGCETLTGLAIGFFGRSFYFALETLASGVATMIGLGGIPGNPVADTEAAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
LAGSLIVMAATILVFALDLHWELFRGLIASYDRIPPGHPFGSRLMLAGLVDRTGAAFAMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
LRVTSPFIIYSVIVNLALGLANKLTPQIPVFFIATPFILFGGLAILLFLSNDLLGQFILD
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEHWLRRG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]