| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yejH [H]
Identifier: 170747955
GI number: 170747955
Start: 1620045
End: 1621754
Strand: Reverse
Name: yejH [H]
Synonym: Mrad2831_1537
Alternate gene names: 170747955
Gene position: 1621754-1620045 (Counterclockwise)
Preceding gene: 170747956
Following gene: 170747951
Centisome position: 26.68
GC content: 76.67
Gene sequence:
>1710_bases ATGCTGCGCCTGCGGGACTACCAGCGCGCCAGCCTCGACGCGCTCTCGGCCGCCTGGGCGCGGGGAGGGGCGGACGACGC GGCGCCCGGCCACCTGATCGTCCTGCCCACCGGGGCCGGCAAGGCGCTCGTGATCGCGGCCCTCGCCCGGGAGACCCTGG ACGAGAATCCCCTCGCCCGGGTGGCGATCGTCACCCACAGCCGCGAGCTGGTCGCCCAGAATTTCTCCGAGCTGACCCGG TCCTGGCCGGGGGCGCCGGCCGGCATCTTCTCGGCCGGGCTCCGGCGGCGGGAGGCCGGGGCGCAGGTGCTGGTCTGCGG CATCCAGTCGGTGGCCGACCGGCTCGACGCGATCGGTCCGCGCGACCTCGTGATCGTCGACGAGGCCCACCTGATCCCCC GCGCCGCCGACACCCGCTACGGCCGCTTCCTGGCGGGCCTGCGCGCGCGGACCCCCGGGCTGCGTGTGGCGGGCTTCACC GCCACGCCCTACCGGCTCGATTCGGGCCGCCTCGACGAAGGCGAGCACCGGCTCTTCTCCGGCATCGCCTACGAGGCCGA CACGTTCACGCTGATCCGGCGCGGCTTCCTGGCGCCCCTCGTCTCCAAGGCGACGCTCACCCAGCTCGACGTCTCGGGCG TCGGCCGGCGCGGGGGCGACTACATCCCGGGCGAGCTGGAGGCGGCGGTCAACCGCGACTGGATCACCCGCGCGGCGGTC GCGGAGCTCGCGGAGTACGGGCGCGCCCGCCGGGCCTGGCTCGCCTTCTGCGCCGGCCTCGCCCACGCGGAGGCCGTGCG CGACGCGGTGCGGGCGGAAGGGTATTCCTGCGAGAGCGTCTCGGGCGAGACGCCCCGCCGGGAGCGCGACCGCATCGTCG CGGCGTTCCGGGCCGGGCAGATCCGCTGCCTGACCTCGGTGGGCGTGCTCGGGACCGGCTTCAACGTGCCCGAGGTCGAT CTGGTGGCGCTGCTGCGCCCGACCCGCAGCACCGGCCTCTACGTGCAGCAGGTCGGCCGGGCGCTGCGCTGCGCGCCCGG AAAGGCCGACGCGCTGATCCTGGACTATGCCGGTCTGGTGCGGATGCACGGGCCCGTCGACGCCGTGACGGTCCGGAGCG CCACACAGGGATTGGGCGGGGCAGGGGCCTCGCGCGCCAAGCCCTGCCCCGGCTGCGGCGCCCTGATCGCGCTGAACGCC TCCACCTGCGAGGCGTGCTGGACCGAGCCGGAGGCGGACCCGGACGCCGAGGCGCCGCACGAGGCCGCCGCCGACGACGA GCTGGCGATCCTCTCGGCGGATCCCGGGCTGCCCGGTCCCGAGCCGGCGGGCCCTGCCCCGGCGGCGGAGGCCGGCTGGC AGGAGGCCGCGTGGCATCCAGTCACGGCCCTGAAGCTGGAGGCCGCGCCCGACGGGCTCGACCTCGTCCTCGGCTGGCGG GACGGCCCCGCCGAGGCGGCGTGGCGCGTCCGCCTGCGGCCCGAGCGCAGCGGCTACGAGCGGGATAAGGCGGTGTCCTG GTGGCGCGGCCTCGGCGGCGGCCGGGACGCGCCGATGAGCGCCGCGGAATTCTTGGAGCGCGCCGCGCTCCTGGCCCGGC CGGCATCGATCCGGATCCGGACCGGCCGTCTGTCGGAGCATATCGACTGCCGGACGCGGGACGGCCGGATCCTCGGCGAC GTCCGCCGCACGGCCGGGCGCGCCGCGTGA
Upstream 100 bases:
>100_bases CGAGGCCCGGGCCCGGCACGGCTGGATCATGGACATCTACCTGCTGCGCCGTGACCGCGCCGCCACGGACAGGGCCGGCG CGGCCGGCTAGACCGCCGCC
Downstream 100 bases:
>100_bases GGGCGCGCGGGCGGCACGCCGCGCCGCGGGGAGGGGGCTCGGACCGCCCTCGCCCGATCCGGAAGCCGCCCGGCCGGACG GGACCCGACGCCGGGGCCGC
Product: helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MLRLRDYQRASLDALSAAWARGGADDAAPGHLIVLPTGAGKALVIAALARETLDENPLARVAIVTHSRELVAQNFSELTR SWPGAPAGIFSAGLRRREAGAQVLVCGIQSVADRLDAIGPRDLVIVDEAHLIPRAADTRYGRFLAGLRARTPGLRVAGFT ATPYRLDSGRLDEGEHRLFSGIAYEADTFTLIRRGFLAPLVSKATLTQLDVSGVGRRGGDYIPGELEAAVNRDWITRAAV AELAEYGRARRAWLAFCAGLAHAEAVRDAVRAEGYSCESVSGETPRRERDRIVAAFRAGQIRCLTSVGVLGTGFNVPEVD LVALLRPTRSTGLYVQQVGRALRCAPGKADALILDYAGLVRMHGPVDAVTVRSATQGLGGAGASRAKPCPGCGALIALNA STCEACWTEPEADPDAEAPHEAAADDELAILSADPGLPGPEPAGPAPAAEAGWQEAAWHPVTALKLEAAPDGLDLVLGWR DGPAEAAWRVRLRPERSGYERDKAVSWWRGLGGGRDAPMSAAEFLERAALLARPASIRIRTGRLSEHIDCRTRDGRILGD VRRTAGRAA
Sequences:
>Translated_569_residues MLRLRDYQRASLDALSAAWARGGADDAAPGHLIVLPTGAGKALVIAALARETLDENPLARVAIVTHSRELVAQNFSELTR SWPGAPAGIFSAGLRRREAGAQVLVCGIQSVADRLDAIGPRDLVIVDEAHLIPRAADTRYGRFLAGLRARTPGLRVAGFT ATPYRLDSGRLDEGEHRLFSGIAYEADTFTLIRRGFLAPLVSKATLTQLDVSGVGRRGGDYIPGELEAAVNRDWITRAAV AELAEYGRARRAWLAFCAGLAHAEAVRDAVRAEGYSCESVSGETPRRERDRIVAAFRAGQIRCLTSVGVLGTGFNVPEVD LVALLRPTRSTGLYVQQVGRALRCAPGKADALILDYAGLVRMHGPVDAVTVRSATQGLGGAGASRAKPCPGCGALIALNA STCEACWTEPEADPDAEAPHEAAADDELAILSADPGLPGPEPAGPAPAAEAGWQEAAWHPVTALKLEAAPDGLDLVLGWR DGPAEAAWRVRLRPERSGYERDKAVSWWRGLGGGRDAPMSAAEFLERAALLARPASIRIRTGRLSEHIDCRTRDGRILGD VRRTAGRAA >Mature_569_residues MLRLRDYQRASLDALSAAWARGGADDAAPGHLIVLPTGAGKALVIAALARETLDENPLARVAIVTHSRELVAQNFSELTR SWPGAPAGIFSAGLRRREAGAQVLVCGIQSVADRLDAIGPRDLVIVDEAHLIPRAADTRYGRFLAGLRARTPGLRVAGFT ATPYRLDSGRLDEGEHRLFSGIAYEADTFTLIRRGFLAPLVSKATLTQLDVSGVGRRGGDYIPGELEAAVNRDWITRAAV AELAEYGRARRAWLAFCAGLAHAEAVRDAVRAEGYSCESVSGETPRRERDRIVAAFRAGQIRCLTSVGVLGTGFNVPEVD LVALLRPTRSTGLYVQQVGRALRCAPGKADALILDYAGLVRMHGPVDAVTVRSATQGLGGAGASRAKPCPGCGALIALNA STCEACWTEPEADPDAEAPHEAAADDELAILSADPGLPGPEPAGPAPAAEAGWQEAAWHPVTALKLEAAPDGLDLVLGWR DGPAEAAWRVRLRPERSGYERDKAVSWWRGLGGGRDAPMSAAEFLERAALLARPASIRIRTGRLSEHIDCRTRDGRILGD VRRTAGRAA
Specific function: Unknown
COG id: COG1061
COG function: function code KL; DNA or RNA helicases of superfamily II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788511, Length=411, Percent_Identity=36.9829683698297, Blast_Score=215, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6320539, Length=367, Percent_Identity=25.0681198910082, Blast_Score=122, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR006935 [H]
Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]
EC number: NA
Molecular weight: Translated: 60445; Mature: 60445
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLRDYQRASLDALSAAWARGGADDAAPGHLIVLPTGAGKALVIAALARETLDENPLAR CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEE VAIVTHSRELVAQNFSELTRSWPGAPAGIFSAGLRRREAGAQVLVCGIQSVADRLDAIGP EEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCC RDLVIVDEAHLIPRAADTRYGRFLAGLRARTPGLRVAGFTATPYRLDSGRLDEGEHRLFS CCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCCCCHHHHHH GIAYEADTFTLIRRGFLAPLVSKATLTQLDVSGVGRRGGDYIPGELEAAVNRDWITRAAV CEECCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHH AELAEYGRARRAWLAFCAGLAHAEAVRDAVRAEGYSCESVSGETPRRERDRIVAAFRAGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC IRCLTSVGVLGTGFNVPEVDLVALLRPTRSTGLYVQQVGRALRCAPGKADALILDYAGLV EEEEEECCEEECCCCCCCHHHHEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECHHHH RMHGPVDAVTVRSATQGLGGAGASRAKPCPGCGALIALNASTCEACWTEPEADPDAEAPH EECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCC EAAADDELAILSADPGLPGPEPAGPAPAAEAGWQEAAWHPVTALKLEAAPDGLDLVLGWR CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCEEEEECC DGPAEAAWRVRLRPERSGYERDKAVSWWRGLGGGRDAPMSAAEFLERAALLARPASIRIR CCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE TGRLSEHIDCRTRDGRILGDVRRTAGRAA ECCCCCCCCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MLRLRDYQRASLDALSAAWARGGADDAAPGHLIVLPTGAGKALVIAALARETLDENPLAR CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEE VAIVTHSRELVAQNFSELTRSWPGAPAGIFSAGLRRREAGAQVLVCGIQSVADRLDAIGP EEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCC RDLVIVDEAHLIPRAADTRYGRFLAGLRARTPGLRVAGFTATPYRLDSGRLDEGEHRLFS CCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCCCCHHHHHH GIAYEADTFTLIRRGFLAPLVSKATLTQLDVSGVGRRGGDYIPGELEAAVNRDWITRAAV CEECCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHH AELAEYGRARRAWLAFCAGLAHAEAVRDAVRAEGYSCESVSGETPRRERDRIVAAFRAGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC IRCLTSVGVLGTGFNVPEVDLVALLRPTRSTGLYVQQVGRALRCAPGKADALILDYAGLV EEEEEECCEEECCCCCCCHHHHEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECHHHH RMHGPVDAVTVRSATQGLGGAGASRAKPCPGCGALIALNASTCEACWTEPEADPDAEAPH EECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCC EAAADDELAILSADPGLPGPEPAGPAPAAEAGWQEAAWHPVTALKLEAAPDGLDLVLGWR CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCCCEEEEECC DGPAEAAWRVRLRPERSGYERDKAVSWWRGLGGGRDAPMSAAEFLERAALLARPASIRIR CCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEE TGRLSEHIDCRTRDGRILGDVRRTAGRAA ECCCCCCCCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]