| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yagS [H]
Identifier: 170747948
GI number: 170747948
Start: 1613318
End: 1614361
Strand: Reverse
Name: yagS [H]
Synonym: Mrad2831_1530
Alternate gene names: 170747948
Gene position: 1614361-1613318 (Counterclockwise)
Preceding gene: 170747949
Following gene: 170747947
Centisome position: 26.56
GC content: 76.63
Gene sequence:
>1044_bases GTGAGGACCTTCGACTACATCCGCCCCGCGAGCGTGCCCGAGGCCGTGGCGGCCGGCCAGCTTCCGGGCACGGCCTACCT CGCCGCCGGCACCAACCTCGTCGACCTGATGAAGGGCGGCGTCGCCACGCCGGAGCGGGTCGTCGACATCACCCGCCTCC CCGGCCTCTCGGCCATCGAGCGGCTGCCGGACGGCACCGCCCGGGTCGGCGCCCTGGTGCGCAACAGCGACCTCGCCCAC GATTCGGCCTTCGCCGAGGCCTACCCGATGGTGGCCGAGGCCCTGCTGGCCGGCGCCTCGGCGCAGCTGCGCAACGCCGC CACGGTCGGCGGCAACCTGATGCAGCGCACCCGCTGCCAGTTCTTCACCGACGCGGTCTCGCCCTGCAACAAGCGCGCGC CCGGCTCCGGCTGCGCGGCCCTGGGGCACGCCACCCGCATCCACGCGGTCCAGGGCTGGAGCGAGCACTGCATCGCCACC CACCCGTCCGACTTCTGCGTGCCGCTCGCCGCCCTCGACGCGGTGGTGGAGATCACCGGGCCGGACGGCGCCCGGGAGGT GCCGCTCACCGCGTTCCACCACCTCCCCGGCGACCACCCGGAGCGGGAGACCGACCTGCGGCCCGGCGAGCTGATCACCG CCCTGCGCCTGCCCCCGGAGGCGGCGTCCTTCCGGGGCAACGCCCGCTACCTCAAGGTCCGCGACCGCACCTCCTACGCC TTCGCGGTCGTCTCGGCGGCGGCCGCCCTCACCCTGGAGGCCGGCGGCCGGATCGGGCAGGCCCGGCTCGCCCTGGGCGG GCTGGCGCTCAAGCCCTGGCGGGTGGCGGAGGCCGAGGCGGCGCTCGCCGGACAGGCACCCTCCGCCGAGGCCTTCGCGA AGGCCGCCGACGCGGCGCTGTCCGGCGCCAGGCCCACCGGCGAAGCCAACGCCTTCAAGATCGAGCTCGCCCGCCGGGTG GCGATCCGCGCGCTGACCCAGGCCGCCGCGGGCACGCCCGCCCGGATCCCGGCGCTCCCCGCCTCCCCGTTCGGCATCGT CTGA
Upstream 100 bases:
>100_bases GCATGAGCGGCAATCTCTGCCGCTGCGGCGCCTACGCGGGCATCCTGGACGCCGTGCAGGACGCGGCGGCCCGGACCTCG GAGCAGCGGGAGGACGCGGC
Downstream 100 bases:
>100_bases CCCCGCCCCCGGTCGGCGGCTCGGCGCCGTCATCGCGGGCGGAGCGAGCCGGGCGGCGCCACGATGCCCGACGTCGCGCT GCCCTGGGTCACTTCGCTCC
Product: FAD-binding molybdopterin dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MRTFDYIRPASVPEAVAAGQLPGTAYLAAGTNLVDLMKGGVATPERVVDITRLPGLSAIERLPDGTARVGALVRNSDLAH DSAFAEAYPMVAEALLAGASAQLRNAATVGGNLMQRTRCQFFTDAVSPCNKRAPGSGCAALGHATRIHAVQGWSEHCIAT HPSDFCVPLAALDAVVEITGPDGAREVPLTAFHHLPGDHPERETDLRPGELITALRLPPEAASFRGNARYLKVRDRTSYA FAVVSAAAALTLEAGGRIGQARLALGGLALKPWRVAEAEAALAGQAPSAEAFAKAADAALSGARPTGEANAFKIELARRV AIRALTQAAAGTPARIPALPASPFGIV
Sequences:
>Translated_347_residues MRTFDYIRPASVPEAVAAGQLPGTAYLAAGTNLVDLMKGGVATPERVVDITRLPGLSAIERLPDGTARVGALVRNSDLAH DSAFAEAYPMVAEALLAGASAQLRNAATVGGNLMQRTRCQFFTDAVSPCNKRAPGSGCAALGHATRIHAVQGWSEHCIAT HPSDFCVPLAALDAVVEITGPDGAREVPLTAFHHLPGDHPERETDLRPGELITALRLPPEAASFRGNARYLKVRDRTSYA FAVVSAAAALTLEAGGRIGQARLALGGLALKPWRVAEAEAALAGQAPSAEAFAKAADAALSGARPTGEANAFKIELARRV AIRALTQAAAGTPARIPALPASPFGIV >Mature_347_residues MRTFDYIRPASVPEAVAAGQLPGTAYLAAGTNLVDLMKGGVATPERVVDITRLPGLSAIERLPDGTARVGALVRNSDLAH DSAFAEAYPMVAEALLAGASAQLRNAATVGGNLMQRTRCQFFTDAVSPCNKRAPGSGCAALGHATRIHAVQGWSEHCIAT HPSDFCVPLAALDAVVEITGPDGAREVPLTAFHHLPGDHPERETDLRPGELITALRLPPEAASFRGNARYLKVRDRTSYA FAVVSAAAALTLEAGGRIGQARLALGGLALKPWRVAEAEAALAGQAPSAEAFAKAADAALSGARPTGEANAFKIELARRV AIRALTQAAAGTPARIPALPASPFGIV
Specific function: Unknown
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1786479, Length=332, Percent_Identity=48.7951807228916, Blast_Score=272, Evalue=2e-74, Organism=Escherichia coli, GI1789231, Length=329, Percent_Identity=23.1003039513678, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.17.1.4 [H]
Molecular weight: Translated: 35907; Mature: 35907
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFDYIRPASVPEAVAAGQLPGTAYLAAGTNLVDLMKGGVATPERVVDITRLPGLSAIE CCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCHHHHH RLPDGTARVGALVRNSDLAHDSAFAEAYPMVAEALLAGASAQLRNAATVGGNLMQRTRCQ HCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHH FFTDAVSPCNKRAPGSGCAALGHATRIHAVQGWSEHCIATHPSDFCVPLAALDAVVEITG HHHHHHCCCCCCCCCCCHHHHCCHHEEEEECCCCCCCEEECCCHHHHHHHHHCEEEEEEC PDGAREVPLTAFHHLPGDHPERETDLRPGELITALRLPPEAASFRGNARYLKVRDRTSYA CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCEEEEEECCCCHH FAVVSAAAALTLEAGGRIGQARLALGGLALKPWRVAEAEAALAGQAPSAEAFAKAADAAL HHHHHHHHHEEECCCCCCCHHHHHHCCEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH SGARPTGEANAFKIELARRVAIRALTQAAAGTPARIPALPASPFGIV CCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTFDYIRPASVPEAVAAGQLPGTAYLAAGTNLVDLMKGGVATPERVVDITRLPGLSAIE CCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCHHHHH RLPDGTARVGALVRNSDLAHDSAFAEAYPMVAEALLAGASAQLRNAATVGGNLMQRTRCQ HCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHH FFTDAVSPCNKRAPGSGCAALGHATRIHAVQGWSEHCIATHPSDFCVPLAALDAVVEITG HHHHHHCCCCCCCCCCCHHHHCCHHEEEEECCCCCCCEEECCCHHHHHHHHHCEEEEEEC PDGAREVPLTAFHHLPGDHPERETDLRPGELITALRLPPEAASFRGNARYLKVRDRTSYA CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCEEEEEECCCCHH FAVVSAAAALTLEAGGRIGQARLALGGLALKPWRVAEAEAALAGQAPSAEAFAKAADAAL HHHHHHHHHEEECCCCCCCHHHHHHCCEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH SGARPTGEANAFKIELARRVAIRALTQAAAGTPARIPALPASPFGIV CCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]