| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is fct [H]
Identifier: 170747917
GI number: 170747917
Start: 1567281
End: 1569524
Strand: Reverse
Name: fct [H]
Synonym: Mrad2831_1499
Alternate gene names: 170747917
Gene position: 1569524-1567281 (Counterclockwise)
Preceding gene: 170747918
Following gene: 170747908
Centisome position: 25.82
GC content: 69.34
Gene sequence:
>2244_bases ATGAGAGCCGTCCACCCCCGCCCCACCCTGCGCGCCCTGCTCGCCGGCGCCTCGCTCGCCGTGCTGGCGCAGGCCGCGCC GAGCCTCGCCCAGGACGCGGCGCCGCGCCGCGGCGGCGCCAACCCGCCGGCCGGCGGCAGCGTGCAGCTCGGGGAGCTGA GCGTCACCGGCCAGGGCGGCGGCCCGGCCTCCGGGGTCCCCGCCGGCGCGCCCGTGCGGGCCGCGGAGAGCCCGACCGGC CCGATCGACGGCTACGTGGCCCGGCGCTCGGCGACCGCGACCAAGACCAACACGCCGCTGATCGAGACCCCGCAATCGAT CACCGTCGTGGGCCGGCAGCAGCTCGACACCCAGAACGCCCAGACCCTCACCCAGGCGACCCAGTACGTCGCCGGCACCT ACGCGGGCACCTTCGGCGCCGACACGCGCCTCGACTTCTTCCAGCTGCGCGGATTCGTGGTCAGCGATTACGGCCTCTAC CTCAACGGCCTGCAGCTCCTGAACTACGGCTTCGCCTACAGCCGCGTGGACACGTTCGGGCTGGAGCGGATCGAGGTGCT GCGCGGCCCCTCCGCGGTGCTGTTCGGCGCCGGCAATCCCGGCGGCCTGATCAACCAGATCAGCAAGCGCCCGACCGAGA CCCCGTTCGGGCTCGTCGAGGTCGGCGGCGGCTCCTTCGACCAGCGCTACGCCGCCTTCGACGTCGGCGGCCCGGCCGAC GCCGAGGGGCACTGGTTCACCCGGCTCACCGGCTACGCCCGCAACGGCGGCACCCAGGTCCAGGGGGCGCCGGACGACAG CTACTACATCGCCCCGGCCTTCACCTATAAGCCGGACGGGTCGACCAAGTTCACGGTCCTGTCGAGCTTCCAGCACGACA ACACGGCGGTGACGGCGAACTTCCTGCCCTACTACGGCACCGCCCGGCCGACCGTGCTCGGCCTGCGCATCCCGCGCTCG CTCAACGTCGGCGATGCCGGCTTCAACACCTTCCGGCGCGACCAGGCCTTCATCGGCTACGAGTTCGAGCACGTCTTCGA CGACACCTGGGCGGTGCGCCAGAACGCCCGCTACGGCTACACGCAGAGCTTCCAGAATTCCTACATCGGCCAGCTCGGCT ACACCGACCCGCTCCAGACCCAGCTCGGCCGCTACCTGTTCCGGGATTCCGCCAAGATCGCGCAGCTCGACGTCGACACC CAGGCCGAGGCCAAGTTCTCCGACGGCTTCTTCCGCCACGACTTCCTGATGGGCGTCGAGTACCGGAACTTCCAGATCCA CGACAACCAGGCCTCGGGCTTCCCCGGGCCCGACCTGAACATCCTCGCGCCGATCTACGGTCCGCAGACGGTCTCGGCCT CGCCCTACCTGATCAACGCCAACTCGTTCCAGCAGGTCGGCCTGTACTTCCAGGACCAGATCAAGCTCACCCCGGAGCTG ACCCTGATCCTCGGCGGCCGCCAGGACTTCGTCCAGAACACCGTCTACGACCGCCTGACCCCCGCCAACACCAACGGCCG CAACGACAGCGCCTTCACCTACCGGGCGGCGGCGATCTACAACTTCGACTTCGGCCTCGCGCCCTACATCATGTACGCGA CCTCGTTCCAGCCCCAGATCGGCGTGGACATCAACAACCGCACCTTCAGGCCCGATACCGGCGATCAGGTCGAGGGCGGC GTCAAGTTCGAGCCGCCGGGCCAGGGCTACTTCCTGACGCTGGCGGGCTTCGACATCCACCGCAACAACGTGCTCACCCC CAACCCGGTGAACACGATCTTCCAGACCCAGGTCGGCGCGGTGCGCTCCACCGGCTTCGAGGCGCAGCTCGTCGCCAACG TCGCCGACGGCCTCAACCTCGTGGCGTCCTTCACCAAGTTCGACTTCACCACCATCCGGGACGCCGATCCGGTGCGGGTC GGCAAGACGCCGGTCAACATCCCGCAGACCCTGGCCTCGCTGTTCGCCGACTACACCATCCCGCTCGGGCCGTGGCGCGG CTTCGGCTTCGGCGGCGGCGTGCGCTACGTCGGCAGCTCGTTCGCGGATGTCGGCAACACCCTGCGGGTGCCCGACTACG TGCTGTTCGACGCGCAGGTGCACTACGATTACGAGAACTGGCGCTTCCAGGTGAACGCCTCGAACCTCGCCGACCGGCGC TACGTCGCCTCCTGCCAGTCGAACGTGTCGTGCTTCTACGGCGACGCCCGGCGGGTGCTGGCGAAGGTCAGCTACAAGTG GTGA
Upstream 100 bases:
>100_bases ACAGTAGTTTATCACAATTCTAAACAGCGCGGCTGAGACGTCGGGGGCGAATCCGGCGCGCGCGGCCGGCTGCCCGCAGC GTCGCATCCGGCAAGGGACC
Downstream 100 bases:
>100_bases GGCGGCTCGGGCGGTCCCCGTCGTGACCGCCCGGTCGTCGTGATCCGCTGCGCCCGGATCAGCCGTTCGCCGCCTCCGCC CCGGTGATCGGCTGCGGCCC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 747; Mature: 747
Protein sequence:
>747_residues MRAVHPRPTLRALLAGASLAVLAQAAPSLAQDAAPRRGGANPPAGGSVQLGELSVTGQGGGPASGVPAGAPVRAAESPTG PIDGYVARRSATATKTNTPLIETPQSITVVGRQQLDTQNAQTLTQATQYVAGTYAGTFGADTRLDFFQLRGFVVSDYGLY LNGLQLLNYGFAYSRVDTFGLERIEVLRGPSAVLFGAGNPGGLINQISKRPTETPFGLVEVGGGSFDQRYAAFDVGGPAD AEGHWFTRLTGYARNGGTQVQGAPDDSYYIAPAFTYKPDGSTKFTVLSSFQHDNTAVTANFLPYYGTARPTVLGLRIPRS LNVGDAGFNTFRRDQAFIGYEFEHVFDDTWAVRQNARYGYTQSFQNSYIGQLGYTDPLQTQLGRYLFRDSAKIAQLDVDT QAEAKFSDGFFRHDFLMGVEYRNFQIHDNQASGFPGPDLNILAPIYGPQTVSASPYLINANSFQQVGLYFQDQIKLTPEL TLILGGRQDFVQNTVYDRLTPANTNGRNDSAFTYRAAAIYNFDFGLAPYIMYATSFQPQIGVDINNRTFRPDTGDQVEGG VKFEPPGQGYFLTLAGFDIHRNNVLTPNPVNTIFQTQVGAVRSTGFEAQLVANVADGLNLVASFTKFDFTTIRDADPVRV GKTPVNIPQTLASLFADYTIPLGPWRGFGFGGGVRYVGSSFADVGNTLRVPDYVLFDAQVHYDYENWRFQVNASNLADRR YVASCQSNVSCFYGDARRVLAKVSYKW
Sequences:
>Translated_747_residues MRAVHPRPTLRALLAGASLAVLAQAAPSLAQDAAPRRGGANPPAGGSVQLGELSVTGQGGGPASGVPAGAPVRAAESPTG PIDGYVARRSATATKTNTPLIETPQSITVVGRQQLDTQNAQTLTQATQYVAGTYAGTFGADTRLDFFQLRGFVVSDYGLY LNGLQLLNYGFAYSRVDTFGLERIEVLRGPSAVLFGAGNPGGLINQISKRPTETPFGLVEVGGGSFDQRYAAFDVGGPAD AEGHWFTRLTGYARNGGTQVQGAPDDSYYIAPAFTYKPDGSTKFTVLSSFQHDNTAVTANFLPYYGTARPTVLGLRIPRS LNVGDAGFNTFRRDQAFIGYEFEHVFDDTWAVRQNARYGYTQSFQNSYIGQLGYTDPLQTQLGRYLFRDSAKIAQLDVDT QAEAKFSDGFFRHDFLMGVEYRNFQIHDNQASGFPGPDLNILAPIYGPQTVSASPYLINANSFQQVGLYFQDQIKLTPEL TLILGGRQDFVQNTVYDRLTPANTNGRNDSAFTYRAAAIYNFDFGLAPYIMYATSFQPQIGVDINNRTFRPDTGDQVEGG VKFEPPGQGYFLTLAGFDIHRNNVLTPNPVNTIFQTQVGAVRSTGFEAQLVANVADGLNLVASFTKFDFTTIRDADPVRV GKTPVNIPQTLASLFADYTIPLGPWRGFGFGGGVRYVGSSFADVGNTLRVPDYVLFDAQVHYDYENWRFQVNASNLADRR YVASCQSNVSCFYGDARRVLAKVSYKW >Mature_747_residues MRAVHPRPTLRALLAGASLAVLAQAAPSLAQDAAPRRGGANPPAGGSVQLGELSVTGQGGGPASGVPAGAPVRAAESPTG PIDGYVARRSATATKTNTPLIETPQSITVVGRQQLDTQNAQTLTQATQYVAGTYAGTFGADTRLDFFQLRGFVVSDYGLY LNGLQLLNYGFAYSRVDTFGLERIEVLRGPSAVLFGAGNPGGLINQISKRPTETPFGLVEVGGGSFDQRYAAFDVGGPAD AEGHWFTRLTGYARNGGTQVQGAPDDSYYIAPAFTYKPDGSTKFTVLSSFQHDNTAVTANFLPYYGTARPTVLGLRIPRS LNVGDAGFNTFRRDQAFIGYEFEHVFDDTWAVRQNARYGYTQSFQNSYIGQLGYTDPLQTQLGRYLFRDSAKIAQLDVDT QAEAKFSDGFFRHDFLMGVEYRNFQIHDNQASGFPGPDLNILAPIYGPQTVSASPYLINANSFQQVGLYFQDQIKLTPEL TLILGGRQDFVQNTVYDRLTPANTNGRNDSAFTYRAAAIYNFDFGLAPYIMYATSFQPQIGVDINNRTFRPDTGDQVEGG VKFEPPGQGYFLTLAGFDIHRNNVLTPNPVNTIFQTQVGAVRSTGFEAQLVANVADGLNLVASFTKFDFTTIRDADPVRV GKTPVNIPQTLASLFADYTIPLGPWRGFGFGGGVRYVGSSFADVGNTLRVPDYVLFDAQVHYDYENWRFQVNASNLADRR YVASCQSNVSCFYGDARRVLAKVSYKW
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=706, Percent_Identity=35.9773371104816, Blast_Score=394, Evalue=1e-110, Organism=Escherichia coli, GI1787344, Length=710, Percent_Identity=24.6478873239437, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1787024, Length=735, Percent_Identity=23.8095238095238, Blast_Score=102, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81317; Mature: 81317
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVHPRPTLRALLAGASLAVLAQAAPSLAQDAAPRRGGANPPAGGSVQLGELSVTGQGG CCCCCCCHHHHHHHHCCHHHHHHHHCHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCC GPASGVPAGAPVRAAESPTGPIDGYVARRSATATKTNTPLIETPQSITVVGRQQLDTQNA CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCEEEEEEHHHCCCCHH QTLTQATQYVAGTYAGTFGADTRLDFFQLRGFVVSDYGLYLNGLQLLNYGFAYSRVDTFG HHHHHHHHHHHHCCCCCCCCCCCEEHHHHCCEEEECCCHHHHHHHHHHCCCHHHHHHHHC LERIEVLRGPSAVLFGAGNPGGLINQISKRPTETPFGLVEVGGGSFDQRYAAFDVGGPAD HHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCCC AEGHWFTRLTGYARNGGTQVQGAPDDSYYIAPAFTYKPDGSTKFTVLSSFQHDNTAVTAN CCCCEEEEEEEEECCCCCEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCEEEEEE FLPYYGTARPTVLGLRIPRSLNVGDAGFNTFRRDQAFIGYEFEHVFDDTWAVRQNARYGY CCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCEEEEEEHHHHHCCHHHHHCCCCCCC TQSFQNSYIGQLGYTDPLQTQLGRYLFRDSAKIAQLDVDTQAEAKFSDGFFRHDFLMGVE CHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEE YRNFQIHDNQASGFPGPDLNILAPIYGPQTVSASPYLINANSFQQVGLYFQDQIKLTPEL EEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCHHCCEEEEEEEEECCEE TLILGGRQDFVQNTVYDRLTPANTNGRNDSAFTYRAAAIYNFDFGLAPYIMYATSFQPQI EEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCEE GVDINNRTFRPDTGDQVEGGVKFEPPGQGYFLTLAGFDIHRNNVLTPNPVNTIFQTQVGA EEEECCCEECCCCCCCCCCCEEECCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHH VRSTGFEAQLVANVADGLNLVASFTKFDFTTIRDADPVRVGKTPVNIPQTLASLFADYTI HHCCCCCEEHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCHHHHHHHHHHCCCC PLGPWRGFGFGGGVRYVGSSFADVGNTLRVPDYVLFDAQVHYDYENWRFQVNASNLADRR CCCCCCCCCCCCCHHHHCCHHHHCCCEEECCCEEEEEEEEEEECCCEEEEEECCCCCCHH YVASCQSNVSCFYGDARRVLAKVSYKW HHHHHCCCCEEEECHHHHHHHHHCCCC >Mature Secondary Structure MRAVHPRPTLRALLAGASLAVLAQAAPSLAQDAAPRRGGANPPAGGSVQLGELSVTGQGG CCCCCCCHHHHHHHHCCHHHHHHHHCHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCC GPASGVPAGAPVRAAESPTGPIDGYVARRSATATKTNTPLIETPQSITVVGRQQLDTQNA CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCEEEEEEHHHCCCCHH QTLTQATQYVAGTYAGTFGADTRLDFFQLRGFVVSDYGLYLNGLQLLNYGFAYSRVDTFG HHHHHHHHHHHHCCCCCCCCCCCEEHHHHCCEEEECCCHHHHHHHHHHCCCHHHHHHHHC LERIEVLRGPSAVLFGAGNPGGLINQISKRPTETPFGLVEVGGGSFDQRYAAFDVGGPAD HHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCCC AEGHWFTRLTGYARNGGTQVQGAPDDSYYIAPAFTYKPDGSTKFTVLSSFQHDNTAVTAN CCCCEEEEEEEEECCCCCEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCEEEEEE FLPYYGTARPTVLGLRIPRSLNVGDAGFNTFRRDQAFIGYEFEHVFDDTWAVRQNARYGY CCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCEEEEEEHHHHHCCHHHHHCCCCCCC TQSFQNSYIGQLGYTDPLQTQLGRYLFRDSAKIAQLDVDTQAEAKFSDGFFRHDFLMGVE CHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEE YRNFQIHDNQASGFPGPDLNILAPIYGPQTVSASPYLINANSFQQVGLYFQDQIKLTPEL EEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCHHCCEEEEEEEEECCEE TLILGGRQDFVQNTVYDRLTPANTNGRNDSAFTYRAAAIYNFDFGLAPYIMYATSFQPQI EEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCEE GVDINNRTFRPDTGDQVEGGVKFEPPGQGYFLTLAGFDIHRNNVLTPNPVNTIFQTQVGA EEEECCCEECCCCCCCCCCCEEECCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHH VRSTGFEAQLVANVADGLNLVASFTKFDFTTIRDADPVRVGKTPVNIPQTLASLFADYTI HHCCCCCEEHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCHHHHHHHHHHCCCC PLGPWRGFGFGGGVRYVGSSFADVGNTLRVPDYVLFDAQVHYDYENWRFQVNASNLADRR CCCCCCCCCCCCCHHHHCCHHHHCCCEEECCCEEEEEEEEEEECCCEEEEEECCCCCCHH YVASCQSNVSCFYGDARRVLAKVSYKW HHHHHCCCCEEEECHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]