| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yitY [H]
Identifier: 170747886
GI number: 170747886
Start: 1532978
End: 1534432
Strand: Reverse
Name: yitY [H]
Synonym: Mrad2831_1468
Alternate gene names: 170747886
Gene position: 1534432-1532978 (Counterclockwise)
Preceding gene: 170747892
Following gene: 170747885
Centisome position: 25.25
GC content: 74.98
Gene sequence:
>1455_bases ATGGCCGGGACGGGACCGAGCAGGCGCGGGATCCTCGCGGGCGGCGGCGCCGCGGCGGCCGCCGCGCTGCTGCCGCGGGC GGCACGGGCCGCCCCGCGCACCATCCTGAACGACGCGAGCGGCCTCAACCCGACCCCGGTGACGCGGCACGCCGTCCTCC CGACGGGCTCGACCGACGTCCTGATCGAGGCCGTGCGCGCCGAGATCCGGGACGCCGCCGCCGCCGGGCGGCCGGTCGCC GTCGGCGTCGCCCGCCACTCCATGGGCGGACAGAGCCTCGCCCGCGACGGGACTGCCGTGACCCTGGAGGGCGGCCCGAT CGAGCCCGACACCGCCGCCGGCCTCTACCGGGTCGGGGCCGGCGCGCGCTGGGCGCAGGTCATCCGGCAGCTCGACCGGA TCGGGTTCTCGCCCGCGGTGATGCAGTCGAACAGCGATTTCGGGGTCGGCTCGACCTTCAGCGTCAACGCCCACGGCTGG CCCGCGCCCTACGGCCCGTTCGGCTCCACGGTCCGCGCCCTCCGCCTCGTCCTGGCCGACGGCAGCCTCGTGACCTGCTC CCGCACCGAGAACGCCGAGCTGTTCGGGCTGGCGATGGGCGGCTACGGCCTGTTCGGCGTCCTGGTCGACCTCGTGGTCG AGATGGTGCCGAACCGCCTCCTGACGCCGACCTTCGCGGTGATGCCGGCCGCCGCCTTCGCCCCGGCCCTCGCGGCGGCG GTGGCGCGCGACGCGCGGCTGCGCATGGCCTACGGCCGCCTCTCGGTGGCGCGGGCCGGGTTCTTCGACGAGGCGATCCT CGTCACCTACGCGGAGGCCGAGCACCCGCCGCAGGTCCTGCCCGCGGCGGCCGCGCAGGGAGCGTTCTCGGCCGTCTCGC GGGAGATCTACCGCGCCCAGGTCGGCAGCGAGCTCGGCAAGCGCGCCCGCTGGATCGCCGAGACCCGGCTCAACCCGGCC CTGGATCCCGGCCTCGCCACCCGCAACAGCCTGATGAACGAGCCGGTGGCCAACCTCGCCTCGCGCGACCCTGGCCGCAC CGACATCCTGCACGAGTACTTCGTCCCGCCCGAGCGCTTCGACGCGTTCCTCGCCGCCTGCCGCGAGACCATCCCGCGCT CGGGCTGCGACTGCCTCAACGTCACCCTGCGCTACGTCGCGGCGGACCCGGATTCGAGGCTGGCCTACGCGCCGGCCCCG CGCATCGGCGCGGTGATGTCGTTCTCGCAGGGGCTCACCCCCGGCGACGAGGCCGCGATGATGCGCATGACCGAGGCCCT GATCGAGCGCGTCGTGGCGATCGGCGGGGCCTATTACCTGCCCTACCGCCTGCACGCCCGGCGCGACCAGATGGCCCGGG CCTATCCCGATCTCGACACCTTCGTGGCGGCCAAGCGCCGCTACGATCCGGGGCTGCTGTTCCGGAACGCCCTGTGGTCG ACCTACATGGCCTGA
Upstream 100 bases:
>100_bases GCCGGATCCGGACCCGTCGCAGAGTTCTCCGGCGGGCGATCCGGTCGCCCCATCGGCGCGGATCGAGGGCGGGCATCGAG GGCGGGCATCGAGGGCGGGC
Downstream 100 bases:
>100_bases GCGCGAGGATCCGCATGACAGTCTCGCTTCCCCGGGCGGCCGCCCTCGCCTTCGCGGCCATCCTGCTGTTCGCCGCCGCC ACCGACTACGTCCCGGCCTT
Product: FAD linked oxidase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MAGTGPSRRGILAGGGAAAAAALLPRAARAAPRTILNDASGLNPTPVTRHAVLPTGSTDVLIEAVRAEIRDAAAAGRPVA VGVARHSMGGQSLARDGTAVTLEGGPIEPDTAAGLYRVGAGARWAQVIRQLDRIGFSPAVMQSNSDFGVGSTFSVNAHGW PAPYGPFGSTVRALRLVLADGSLVTCSRTENAELFGLAMGGYGLFGVLVDLVVEMVPNRLLTPTFAVMPAAAFAPALAAA VARDARLRMAYGRLSVARAGFFDEAILVTYAEAEHPPQVLPAAAAQGAFSAVSREIYRAQVGSELGKRARWIAETRLNPA LDPGLATRNSLMNEPVANLASRDPGRTDILHEYFVPPERFDAFLAACRETIPRSGCDCLNVTLRYVAADPDSRLAYAPAP RIGAVMSFSQGLTPGDEAAMMRMTEALIERVVAIGGAYYLPYRLHARRDQMARAYPDLDTFVAAKRRYDPGLLFRNALWS TYMA
Sequences:
>Translated_484_residues MAGTGPSRRGILAGGGAAAAAALLPRAARAAPRTILNDASGLNPTPVTRHAVLPTGSTDVLIEAVRAEIRDAAAAGRPVA VGVARHSMGGQSLARDGTAVTLEGGPIEPDTAAGLYRVGAGARWAQVIRQLDRIGFSPAVMQSNSDFGVGSTFSVNAHGW PAPYGPFGSTVRALRLVLADGSLVTCSRTENAELFGLAMGGYGLFGVLVDLVVEMVPNRLLTPTFAVMPAAAFAPALAAA VARDARLRMAYGRLSVARAGFFDEAILVTYAEAEHPPQVLPAAAAQGAFSAVSREIYRAQVGSELGKRARWIAETRLNPA LDPGLATRNSLMNEPVANLASRDPGRTDILHEYFVPPERFDAFLAACRETIPRSGCDCLNVTLRYVAADPDSRLAYAPAP RIGAVMSFSQGLTPGDEAAMMRMTEALIERVVAIGGAYYLPYRLHARRDQMARAYPDLDTFVAAKRRYDPGLLFRNALWS TYMA >Mature_483_residues AGTGPSRRGILAGGGAAAAAALLPRAARAAPRTILNDASGLNPTPVTRHAVLPTGSTDVLIEAVRAEIRDAAAAGRPVAV GVARHSMGGQSLARDGTAVTLEGGPIEPDTAAGLYRVGAGARWAQVIRQLDRIGFSPAVMQSNSDFGVGSTFSVNAHGWP APYGPFGSTVRALRLVLADGSLVTCSRTENAELFGLAMGGYGLFGVLVDLVVEMVPNRLLTPTFAVMPAAAFAPALAAAV ARDARLRMAYGRLSVARAGFFDEAILVTYAEAEHPPQVLPAAAAQGAFSAVSREIYRAQVGSELGKRARWIAETRLNPAL DPGLATRNSLMNEPVANLASRDPGRTDILHEYFVPPERFDAFLAACRETIPRSGCDCLNVTLRYVAADPDSRLAYAPAPR IGAVMSFSQGLTPGDEAAMMRMTEALIERVVAIGGAYYLPYRLHARRDQMARAYPDLDTFVAAKRRYDPGLLFRNALWST YMA
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007173 - InterPro: IPR016166 - InterPro: IPR016164 - InterPro: IPR016168 - InterPro: IPR006094 [H]
Pfam domain/function: PF04030 ALO; PF01565 FAD_binding_4 [H]
EC number: NA
Molecular weight: Translated: 51219; Mature: 51088
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTGPSRRGILAGGGAAAAAALLPRAARAAPRTILNDASGLNPTPVTRHAVLPTGSTDV CCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEECCCCCHHH LIEAVRAEIRDAAAAGRPVAVGVARHSMGGQSLARDGTAVTLEGGPIEPDTAAGLYRVGA HHHHHHHHHHHHHHCCCCEEEEHHHHCCCCHHHHCCCCEEEECCCCCCCCHHCCHHHCCC GARWAQVIRQLDRIGFSPAVMQSNSDFGVGSTFSVNAHGWPAPYGPFGSTVRALRLVLAD CHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC GSLVTCSRTENAELFGLAMGGYGLFGVLVDLVVEMVPNRLLTPTFAVMPAAAFAPALAAA CCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH VARDARLRMAYGRLSVARAGFFDEAILVTYAEAEHPPQVLPAAAAQGAFSAVSREIYRAQ HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH VGSELGKRARWIAETRLNPALDPGLATRNSLMNEPVANLASRDPGRTDILHEYFVPPERF HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCHHHHHHHCCCHHHH DAFLAACRETIPRSGCDCLNVTLRYVAADPDSRLAYAPAPRIGAVMSFSQGLTPGDEAAM HHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCCHHHHH MRMTEALIERVVAIGGAYYLPYRLHARRDQMARAYPDLDTFVAAKRRYDPGLLFRNALWS HHHHHHHHHHHHHHCCCEEECEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH TYMA HHCC >Mature Secondary Structure AGTGPSRRGILAGGGAAAAAALLPRAARAAPRTILNDASGLNPTPVTRHAVLPTGSTDV CCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEECCCCCHHH LIEAVRAEIRDAAAAGRPVAVGVARHSMGGQSLARDGTAVTLEGGPIEPDTAAGLYRVGA HHHHHHHHHHHHHHCCCCEEEEHHHHCCCCHHHHCCCCEEEECCCCCCCCHHCCHHHCCC GARWAQVIRQLDRIGFSPAVMQSNSDFGVGSTFSVNAHGWPAPYGPFGSTVRALRLVLAD CHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC GSLVTCSRTENAELFGLAMGGYGLFGVLVDLVVEMVPNRLLTPTFAVMPAAAFAPALAAA CCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH VARDARLRMAYGRLSVARAGFFDEAILVTYAEAEHPPQVLPAAAAQGAFSAVSREIYRAQ HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH VGSELGKRARWIAETRLNPALDPGLATRNSLMNEPVANLASRDPGRTDILHEYFVPPERF HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCHHHHHHHCCCHHHH DAFLAACRETIPRSGCDCLNVTLRYVAADPDSRLAYAPAPRIGAVMSFSQGLTPGDEAAM HHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCCHHHHH MRMTEALIERVVAIGGAYYLPYRLHARRDQMARAYPDLDTFVAAKRRYDPGLLFRNALWS HHHHHHHHHHHHHHCCCEEECEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHH TYMA HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9025291; 9353931; 9384377 [H]