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The map label for this gene is fimZ [C]

Identifier: 170747717

GI number: 170747717

Start: 1352896

End: 1353654

Strand: Reverse

Name: fimZ [C]

Synonym: Mrad2831_1294

Alternate gene names: 170747717

Gene position: 1353654-1352896 (Counterclockwise)

Preceding gene: 170747718

Following gene: 170747713

Centisome position: 22.27

GC content: 65.74

Gene sequence:

>759_bases
ATGAGTACGACCGTCGGGGTCCTGATCCTGGATGACGCGCAGGACCTGAGCGCTGCCGCCCGCGCTGCTTTGGATCACTT
GCCGGAGATCCGCCTACTCGGCGAGGCATGCCTGGACGAAGCCGATGTCGAGGTTGAGGTCGCTGTGGTCTGTCTCAGCT
CGGACAAGCTCGCGGAGGGAATCGCGCGTGTCACCGGCCTGAGGGAGTGCCGGCCGAACCTGCGCATCCTGGTGACCTTC
GACGCGCTGACAGCGGACCACTTCGAGTCTCTGCTGGATGCGGGTGCTGACGCCTTCGTCGGGCGCTCACATTCGCAGCA
GGAACTCAGTGCGGCGCTGCTTGCCCTCGTGAAGGGAGCGGCTTGCCTCGTTCCTCCGAAGCGGCTGGGCGCCATCAAGG
CGGGCCAGAGCTGCAACTTCGGTCTGTCCCCCCGCGAGATCGACGTCCTGCGCTTCCTCTGCGCAGGCTTCAGCAACAAG
GAGGTCGCCCGGCGCTTGGCGCTGAGTGTGCGCACTGTGGAGACCCATCGGCTCAACCTGCGCCGCAAGACCCAGACCGG
CCGTTTGAAGGAGCTCGTTTCGCTCGCCCACCAGCTTGGGCTGCCGCTCCCGTCTGCTGACGAGTGGGCTTCGCATGCCG
ACAAACGGTTCGCGTCAAAGGGAGGCTCTCTTTTCGAGGCCGTGACCGGCCCGGAAGGGCTTTCCGTCCGTGCCGACGTC
GCTGGCCGTGCAGGAGCGACTTCCTTGAGGGAGCGTTAA

Upstream 100 bases:

>100_bases
CCATATATGGCGGAACGCAAGAAACATTTAAAAACTCCTCGCAAACCTGCTTCTGATCCCGGTTCGGCATATCGAACTGA
GAGACAAAGGGTGCGAGGTC

Downstream 100 bases:

>100_bases
CGGCGCGAGGCGGTCGCTACGGATGGTGGCGGCAGCTCTCCTGCGCGTACTCTGCAGCGTCGCTACGGCTTCTGACAGGC
GAAACCGAACGGCAGGCGGG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Two Component LuxR Family Transcriptional Regulator; Transcriptional Regulator LuxR Family; Oxygen Regulatory Protein NreC; Regulatory Protein LuxR

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSTTVGVLILDDAQDLSAAARAALDHLPEIRLLGEACLDEADVEVEVAVVCLSSDKLAEGIARVTGLRECRPNLRILVTF
DALTADHFESLLDAGADAFVGRSHSQQELSAALLALVKGAACLVPPKRLGAIKAGQSCNFGLSPREIDVLRFLCAGFSNK
EVARRLALSVRTVETHRLNLRRKTQTGRLKELVSLAHQLGLPLPSADEWASHADKRFASKGGSLFEAVTGPEGLSVRADV
AGRAGATSLRER

Sequences:

>Translated_252_residues
MSTTVGVLILDDAQDLSAAARAALDHLPEIRLLGEACLDEADVEVEVAVVCLSSDKLAEGIARVTGLRECRPNLRILVTF
DALTADHFESLLDAGADAFVGRSHSQQELSAALLALVKGAACLVPPKRLGAIKAGQSCNFGLSPREIDVLRFLCAGFSNK
EVARRLALSVRTVETHRLNLRRKTQTGRLKELVSLAHQLGLPLPSADEWASHADKRFASKGGSLFEAVTGPEGLSVRADV
AGRAGATSLRER
>Mature_251_residues
STTVGVLILDDAQDLSAAARAALDHLPEIRLLGEACLDEADVEVEVAVVCLSSDKLAEGIARVTGLRECRPNLRILVTFD
ALTADHFESLLDAGADAFVGRSHSQQELSAALLALVKGAACLVPPKRLGAIKAGQSCNFGLSPREIDVLRFLCAGFSNKE
VARRLALSVRTVETHRLNLRRKTQTGRLKELVSLAHQLGLPLPSADEWASHADKRFASKGGSLFEAVTGPEGLSVRADVA
GRAGATSLRER

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786747, Length=110, Percent_Identity=34.5454545454545, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26839; Mature: 26708

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTVGVLILDDAQDLSAAARAALDHLPEIRLLGEACLDEADVEVEVAVVCLSSDKLAEG
CCCEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHH
IARVTGLRECRPNLRILVTFDALTADHFESLLDAGADAFVGRSHSQQELSAALLALVKGA
HHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCC
ACLVPPKRLGAIKAGQSCNFGLSPREIDVLRFLCAGFSNKEVARRLALSVRTVETHRLNL
CEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RRKTQTGRLKELVSLAHQLGLPLPSADEWASHADKRFASKGGSLFEAVTGPEGLSVRADV
HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEHHCCCCCCEEEECC
AGRAGATSLRER
CCCCCCHHHCCC
>Mature Secondary Structure 
STTVGVLILDDAQDLSAAARAALDHLPEIRLLGEACLDEADVEVEVAVVCLSSDKLAEG
CCEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHH
IARVTGLRECRPNLRILVTFDALTADHFESLLDAGADAFVGRSHSQQELSAALLALVKGA
HHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCC
ACLVPPKRLGAIKAGQSCNFGLSPREIDVLRFLCAGFSNKEVARRLALSVRTVETHRLNL
CEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RRKTQTGRLKELVSLAHQLGLPLPSADEWASHADKRFASKGGSLFEAVTGPEGLSVRADV
HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEHHCCCCCCEEEECC
AGRAGATSLRER
CCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA