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The map label for this gene is rfbC [H]

Identifier: 170747640

GI number: 170747640

Start: 1274899

End: 1276950

Strand: Reverse

Name: rfbC [H]

Synonym: Mrad2831_1213

Alternate gene names: 170747640

Gene position: 1276950-1274899 (Counterclockwise)

Preceding gene: 170747641

Following gene: 170747639

Centisome position: 21.01

GC content: 49.22

Gene sequence:

>2052_bases
ATGGAAACGCTTCAAACTGTTGATCCTCATTATGGCCGCCTCTCTGCCGTCGTTGATGCACGGTTGATAAAAGATGGGCT
TCTGCGGAATCATATTCGCATCTCCTTCGACCGCCCCGCGAATCCGGTTGTTTCAATTATTATAGTATCTTTTAACGCGC
CCGATCTGCTTATTCTGACACTTTACAGGTTGGCTAGCCATTATAAGTTGGCGGGGGCGGTATTTGAGGTCATCATCGTT
GATAATGCTTCTGGAGACGAGACAAAGACAGTTCTCAATATTCTTGACGGAGTAGAAATTATACATTGCGAGACTAATAT
TGGTTTTGGTCCGGCATGTAATTTAGGTGCCAAATCAGCAAATGGGCGCTACCTGCTCTTTCTCAATCCTGACGTTGAGC
TTATCCCGGGCGCTATCGGTGCGCTAATTGAGCCGTTTTCTGATGATACGGTTGGAATCGTGGGTGCTCGTCTTGTATTT
CCAGGAGGCTATCTGCAAGAGTGCGGCGCGTTTTTCCAGGATGACTCACAGCTTACTCATCCCTACGGTCGCGGCAATAA
AAACCCTTTTACCGCTGAGGGCGCTTTCCGAAGAGATGTCGGATATGTGTCTGGAGCAGTAATGGCCGTCGATCGGACGT
TATTTAATAGTCTAGGCGGCTTTGATGATTTGTTCGCCCCGGCGTATTTTGAGGATACCGATCTTTGTGTGCGATGTCAT
CAATCTGGGCGCCGGGTTGTTTATCAACCGAAGGCGACAGCCATCCATTTCGAAAACGCTACTTCTCCCAGTCGACAGGA
CGTGGACTCATTAATAGATCGCAACCGGCAAAGATTTTTGGACCGCCATCGATCGTGGCTGTTTCAACGTCATGAGGCAC
CTCCGCGGTTTGCCGACCGGACATATGACAGCTGGGCTCTCAAAGTCTTGTTTATAGACGATGCAGTGCCGCACCTAGAT
CTTGGTGCTGGTATGCCTCGTTCCAACCTTATCGTTACACTGATGGCTCAGCTCGGATACCAGGTAACGATATATCCAGT
TTATCGATCTGATGTTGACATGGTAGATCGATATCGGGACTTGCCCGATACGATTGAGATTCTCGATTCGGGCGGCGAAG
CCGGGCTCAGCGCGCTCCTTGATGGCCGTTGCAACCATTATGATGTTGTTTGGGTGAGCCGACCACATAATATAAACCTG
TTGTGTGAGCTGATTCAAAGCCGTGATATTGGTCTTCGGGTATTAGCTCGACGTAGGGTTATATTTGATTCGGAGGCCCT
ATTCTGTGTTCGAGACTTCCTGGAATCCACGCTCAAGAGAGGTGTGGGATTCGGTGCAACTTTTGGTAGGAATGCTGCGG
CGGAAATTCGCAACTTTTCCCAGGCAGATCATGTTATATGTGTCTCCGAAAGTGAGGCGCGTTTGTTGAAAAACTTTGGC
TTAAGTAATGTTTCGGTTCTCGGGCATGCATTTGAGCCGCCTCCCCGTGATGTTCCAAACTTCGGGGACCGAGATGGTTT
TGCATTTATTGGATCGTTGTCCGAAACGTCATCTCCAAATACAGACTCGTTGCTTTGGTTTTTCGAAACTATATGGCCTC
ATATTCGGAGCCAAGCTGGCGATGTTAAATTTCGAGTTATCGGGGAGGTCTCCTCAGAGGTTTCTAAAATGTTGTCGTAT
CCGGGCGTTAGTTTCGAGGGGCGTGTTATGGACCCAGCGCCTCTTTATGATCAGTCGCGCGTTTTCGTAGCGCCTACTCG
GTTTGCGGCTGGTGTTCCCCACAAAGTTCACGGAGCAATAGCGCAAGGATTGCCCTGTATAGTTACCCCTATTCTCGCCG
AACAAGTCGGGTGGCCAGATGGGTCTGGTTTTCGCTGCCATGATTGGCGAACTCCGGACGATTTTGCTTCTGGATTGCTT
CGATTGTACAGCGACGAGTCTATTTGGCGGGCTGTTCAAAAGAAAGGCTTCGAGTATATTGCGCAGGATTGCTCTCTTTC
AATATTTAGGACGACACTGCGCTGCCTCTGTGAGCCCTCGGTAGTAGCATGA

Upstream 100 bases:

>100_bases
AGATCTTGATGTTGGAGGCTCTTCGATAATGTTACTTAGTGACTATCTGATCGGACGACTCACCATTGCCAATTGAAGTA
TCTTCATCGGTTCGGGCATC

Downstream 100 bases:

>100_bases
TTTACGCTTTTTTGCGCCCCTCCGGTGCAGCGATCGTTTCTATCCTCTATAGGCGGATATTCCTTGGACGTGTCCCTAAA
ATATTTGACGCTACTTTTTA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 683; Mature: 683

Protein sequence:

>683_residues
METLQTVDPHYGRLSAVVDARLIKDGLLRNHIRISFDRPANPVVSIIIVSFNAPDLLILTLYRLASHYKLAGAVFEVIIV
DNASGDETKTVLNILDGVEIIHCETNIGFGPACNLGAKSANGRYLLFLNPDVELIPGAIGALIEPFSDDTVGIVGARLVF
PGGYLQECGAFFQDDSQLTHPYGRGNKNPFTAEGAFRRDVGYVSGAVMAVDRTLFNSLGGFDDLFAPAYFEDTDLCVRCH
QSGRRVVYQPKATAIHFENATSPSRQDVDSLIDRNRQRFLDRHRSWLFQRHEAPPRFADRTYDSWALKVLFIDDAVPHLD
LGAGMPRSNLIVTLMAQLGYQVTIYPVYRSDVDMVDRYRDLPDTIEILDSGGEAGLSALLDGRCNHYDVVWVSRPHNINL
LCELIQSRDIGLRVLARRRVIFDSEALFCVRDFLESTLKRGVGFGATFGRNAAAEIRNFSQADHVICVSESEARLLKNFG
LSNVSVLGHAFEPPPRDVPNFGDRDGFAFIGSLSETSSPNTDSLLWFFETIWPHIRSQAGDVKFRVIGEVSSEVSKMLSY
PGVSFEGRVMDPAPLYDQSRVFVAPTRFAAGVPHKVHGAIAQGLPCIVTPILAEQVGWPDGSGFRCHDWRTPDDFASGLL
RLYSDESIWRAVQKKGFEYIAQDCSLSIFRTTLRCLCEPSVVA

Sequences:

>Translated_683_residues
METLQTVDPHYGRLSAVVDARLIKDGLLRNHIRISFDRPANPVVSIIIVSFNAPDLLILTLYRLASHYKLAGAVFEVIIV
DNASGDETKTVLNILDGVEIIHCETNIGFGPACNLGAKSANGRYLLFLNPDVELIPGAIGALIEPFSDDTVGIVGARLVF
PGGYLQECGAFFQDDSQLTHPYGRGNKNPFTAEGAFRRDVGYVSGAVMAVDRTLFNSLGGFDDLFAPAYFEDTDLCVRCH
QSGRRVVYQPKATAIHFENATSPSRQDVDSLIDRNRQRFLDRHRSWLFQRHEAPPRFADRTYDSWALKVLFIDDAVPHLD
LGAGMPRSNLIVTLMAQLGYQVTIYPVYRSDVDMVDRYRDLPDTIEILDSGGEAGLSALLDGRCNHYDVVWVSRPHNINL
LCELIQSRDIGLRVLARRRVIFDSEALFCVRDFLESTLKRGVGFGATFGRNAAAEIRNFSQADHVICVSESEARLLKNFG
LSNVSVLGHAFEPPPRDVPNFGDRDGFAFIGSLSETSSPNTDSLLWFFETIWPHIRSQAGDVKFRVIGEVSSEVSKMLSY
PGVSFEGRVMDPAPLYDQSRVFVAPTRFAAGVPHKVHGAIAQGLPCIVTPILAEQVGWPDGSGFRCHDWRTPDDFASGLL
RLYSDESIWRAVQKKGFEYIAQDCSLSIFRTTLRCLCEPSVVA
>Mature_683_residues
METLQTVDPHYGRLSAVVDARLIKDGLLRNHIRISFDRPANPVVSIIIVSFNAPDLLILTLYRLASHYKLAGAVFEVIIV
DNASGDETKTVLNILDGVEIIHCETNIGFGPACNLGAKSANGRYLLFLNPDVELIPGAIGALIEPFSDDTVGIVGARLVF
PGGYLQECGAFFQDDSQLTHPYGRGNKNPFTAEGAFRRDVGYVSGAVMAVDRTLFNSLGGFDDLFAPAYFEDTDLCVRCH
QSGRRVVYQPKATAIHFENATSPSRQDVDSLIDRNRQRFLDRHRSWLFQRHEAPPRFADRTYDSWALKVLFIDDAVPHLD
LGAGMPRSNLIVTLMAQLGYQVTIYPVYRSDVDMVDRYRDLPDTIEILDSGGEAGLSALLDGRCNHYDVVWVSRPHNINL
LCELIQSRDIGLRVLARRRVIFDSEALFCVRDFLESTLKRGVGFGATFGRNAAAEIRNFSQADHVICVSESEARLLKNFG
LSNVSVLGHAFEPPPRDVPNFGDRDGFAFIGSLSETSSPNTDSLLWFFETIWPHIRSQAGDVKFRVIGEVSSEVSKMLSY
PGVSFEGRVMDPAPLYDQSRVFVAPTRFAAGVPHKVHGAIAQGLPCIVTPILAEQVGWPDGSGFRCHDWRTPDDFASGLL
RLYSDESIWRAVQKKGFEYIAQDCSLSIFRTTLRCLCEPSVVA

Specific function: Involved in O-antigen biosynthesis [H]

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00534 Glycos_transf_1; PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 75790; Mature: 75790

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLQTVDPHYGRLSAVVDARLIKDGLLRNHIRISFDRPANPVVSIIIVSFNAPDLLILT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEEECCCCHHHHHH
LYRLASHYKLAGAVFEVIIVDNASGDETKTVLNILDGVEIIHCETNIGFGPACNLGAKSA
HHHHHHHHHHHCEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
NGRYLLFLNPDVELIPGAIGALIEPFSDDTVGIVGARLVFPGGYLQECGAFFQDDSQLTH
CCEEEEEECCCHHCCCCHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCC
PYGRGNKNPFTAEGAFRRDVGYVSGAVMAVDRTLFNSLGGFDDLFAPAYFEDTDLCVRCH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHH
QSGRRVVYQPKATAIHFENATSPSRQDVDSLIDRNRQRFLDRHRSWLFQRHEAPPRFADR
HCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC
TYDSWALKVLFIDDAVPHLDLGAGMPRSNLIVTLMAQLGYQVTIYPVYRSDVDMVDRYRD
CCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCHHHHHHHCC
LPDTIEILDSGGEAGLSALLDGRCNHYDVVWVSRPHNINLLCELIQSRDIGLRVLARRRV
CCHHHHHHHCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHH
IFDSEALFCVRDFLESTLKRGVGFGATFGRNAAAEIRNFSQADHVICVSESEARLLKNFG
EECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCEEEECCHHHHHHHHCC
LSNVSVLGHAFEPPPRDVPNFGDRDGFAFIGSLSETSSPNTDSLLWFFETIWPHIRSQAG
CCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
DVKFRVIGEVSSEVSKMLSYPGVSFEGRVMDPAPLYDQSRVFVAPTRFAAGVPHKVHGAI
CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCHHHHHHH
AQGLPCIVTPILAEQVGWPDGSGFRCHDWRTPDDFASGLLRLYSDESIWRAVQKKGFEYI
HCCCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHH
AQDCSLSIFRTTLRCLCEPSVVA
HHHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
METLQTVDPHYGRLSAVVDARLIKDGLLRNHIRISFDRPANPVVSIIIVSFNAPDLLILT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEEECCCCHHHHHH
LYRLASHYKLAGAVFEVIIVDNASGDETKTVLNILDGVEIIHCETNIGFGPACNLGAKSA
HHHHHHHHHHHCEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
NGRYLLFLNPDVELIPGAIGALIEPFSDDTVGIVGARLVFPGGYLQECGAFFQDDSQLTH
CCEEEEEECCCHHCCCCHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCC
PYGRGNKNPFTAEGAFRRDVGYVSGAVMAVDRTLFNSLGGFDDLFAPAYFEDTDLCVRCH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHH
QSGRRVVYQPKATAIHFENATSPSRQDVDSLIDRNRQRFLDRHRSWLFQRHEAPPRFADR
HCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC
TYDSWALKVLFIDDAVPHLDLGAGMPRSNLIVTLMAQLGYQVTIYPVYRSDVDMVDRYRD
CCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCHHHHHHHCC
LPDTIEILDSGGEAGLSALLDGRCNHYDVVWVSRPHNINLLCELIQSRDIGLRVLARRRV
CCHHHHHHHCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHH
IFDSEALFCVRDFLESTLKRGVGFGATFGRNAAAEIRNFSQADHVICVSESEARLLKNFG
EECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCEEEECCHHHHHHHHCC
LSNVSVLGHAFEPPPRDVPNFGDRDGFAFIGSLSETSSPNTDSLLWFFETIWPHIRSQAG
CCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
DVKFRVIGEVSSEVSKMLSYPGVSFEGRVMDPAPLYDQSRVFVAPTRFAAGVPHKVHGAI
CEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCHHHHHHH
AQGLPCIVTPILAEQVGWPDGSGFRCHDWRTPDDFASGLLRLYSDESIWRAVQKKGFEYI
HCCCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHH
AQDCSLSIFRTTLRCLCEPSVVA
HHHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]