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The map label for this gene is ygbK [C]

Identifier: 170747564

GI number: 170747564

Start: 1192231

End: 1193505

Strand: Reverse

Name: ygbK [C]

Synonym: Mrad2831_1132

Alternate gene names: 170747564

Gene position: 1193505-1192231 (Counterclockwise)

Preceding gene: 170747565

Following gene: 170747563

Centisome position: 19.64

GC content: 75.92

Gene sequence:

>1275_bases
ATGAGCCTCGCGCTGGGATGCGTCGCCGACGACTACACGGGCGCCTCGGACCTCGCCAACACGCTGACCAAGGCGGGCCT
GCGCACGATCCAGACCATCGGCGTGCCTGAGGCGGGCCGGGCGCTGCCGGAGGCCGACGCGGTGGTGGTGGCCCTCAAGA
GCCGCTCGATCCCCGCCGATCAGGCCGTGGCGCGCTCCCGCGAAGCCGAGCGCTGGCTGCGGGCGCGGGGCGCGGCCCAC
GTGATGTTCAAGGTCTGCTCGACCTTCGACTCCACCGATGCGGGCAATATCGGCCCGGTCATGGACGCCCTGCGGGCCGA
CGCGGGCGAGACCGTCGCCCTCGTGACGCCGGCCTTCCCGGAGACGGGGCGGAGCGTCTACCAGGGCAACCTGTTCGTCG
GCTCGGTGCCGCTGAACGAGAGCCCGCTCAAGGACCACCCGCTCAATCCGATGCGCGACGCCAACCTCGTGCGCGTGCTC
GGGCGCCAGAGCCGGAGTCCGGTCGGCCTGATCGACACCGCCACGGTCGCCCGGGGCGCGGAGGCCGTGGCTGCCCGCCT
CGACGCCCTCGCGCAGGAGGGCAAGGGCGCCGCCATCGCGGACGCGATCTTCGACAGCGACCTCGAAGTGCTCGGCCGGG
CGATCCTCGACCGCAAATTCTCGGTGGGGGCCTCCGGTCTCGGCCTCGGCCTCGCGCGGGCGCTGGCCGCCGACGGGCGC
GGCACCAGGGACGCCGCCGGCGCGGCCGTGGGCGAGCCGGTGGGCGGAGCCTCGGCCTGCCTCGCCGGCAGCTGCTCGCA
GGCGACCCTCCAGCAGGTCGCCGCCGCGGAGGCGATCATGCCGGTGCTGCGCCTCGACCCGGCGCGGCTGCTCGCGGGCG
ACGACGTGGTGGCGGAGGCCCTGGCCTTCGCGGAAGAGCGCCTGGCCTCCGGCCCGGTGCTGATCGCCACCTCGGCGCCG
CCCGAGGCGGTGCGCGCGCTCCAGGCCGCCCACGGAGTCGACGCGGCCGGCCACGCCATCGAGGCGGCGCTGGCGGCGAT
CGCCGAGGGCCTCGTCGCCCGCGGGGTGCGCCGGCTCGTGGTCGCCGGCGGCGAGACCTCCGGCGCGGTGGTCGACCGGC
TGGGGCTGACCGCCTTCCTGCTCGGGCCGGAGATCGCGGCGGGCGTGCCGGTGCTGCGCACGGCGGGCCGGCCCGAGCCG
ATGCTGCTCGCCCTCAAATCCGGCAATTTCGGCGGCGCCGACTTCTTCGGCCGCGCCCTCGACATGATGGCCTGA

Upstream 100 bases:

>100_bases
ACCGGCTCGGCTACCGCGGCTTCGTCGGCTGCGAGTACATTCCGGCCGCCGACACCGTCGCGGGCCTCGGCTGGCTCGCC
GCCTACAAGGAGAGCGCCCG

Downstream 100 bases:

>100_bases
CGCCACAACCCGACGGGAGGTTTTCCATGCACGCCCTGATTCTTGGCGCCGCCGGCATGATCGGCCGCCGCCTCGTGGAC
GCCCTGGTGAGGGACGGCCG

Product: Hrp-dependent type III effector protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSLALGCVADDYTGASDLANTLTKAGLRTIQTIGVPEAGRALPEADAVVVALKSRSIPADQAVARSREAERWLRARGAAH
VMFKVCSTFDSTDAGNIGPVMDALRADAGETVALVTPAFPETGRSVYQGNLFVGSVPLNESPLKDHPLNPMRDANLVRVL
GRQSRSPVGLIDTATVARGAEAVAARLDALAQEGKGAAIADAIFDSDLEVLGRAILDRKFSVGASGLGLGLARALAADGR
GTRDAAGAAVGEPVGGASACLAGSCSQATLQQVAAAEAIMPVLRLDPARLLAGDDVVAEALAFAEERLASGPVLIATSAP
PEAVRALQAAHGVDAAGHAIEAALAAIAEGLVARGVRRLVVAGGETSGAVVDRLGLTAFLLGPEIAAGVPVLRTAGRPEP
MLLALKSGNFGGADFFGRALDMMA

Sequences:

>Translated_424_residues
MSLALGCVADDYTGASDLANTLTKAGLRTIQTIGVPEAGRALPEADAVVVALKSRSIPADQAVARSREAERWLRARGAAH
VMFKVCSTFDSTDAGNIGPVMDALRADAGETVALVTPAFPETGRSVYQGNLFVGSVPLNESPLKDHPLNPMRDANLVRVL
GRQSRSPVGLIDTATVARGAEAVAARLDALAQEGKGAAIADAIFDSDLEVLGRAILDRKFSVGASGLGLGLARALAADGR
GTRDAAGAAVGEPVGGASACLAGSCSQATLQQVAAAEAIMPVLRLDPARLLAGDDVVAEALAFAEERLASGPVLIATSAP
PEAVRALQAAHGVDAAGHAIEAALAAIAEGLVARGVRRLVVAGGETSGAVVDRLGLTAFLLGPEIAAGVPVLRTAGRPEP
MLLALKSGNFGGADFFGRALDMMA
>Mature_423_residues
SLALGCVADDYTGASDLANTLTKAGLRTIQTIGVPEAGRALPEADAVVVALKSRSIPADQAVARSREAERWLRARGAAHV
MFKVCSTFDSTDAGNIGPVMDALRADAGETVALVTPAFPETGRSVYQGNLFVGSVPLNESPLKDHPLNPMRDANLVRVLG
RQSRSPVGLIDTATVARGAEAVAARLDALAQEGKGAAIADAIFDSDLEVLGRAILDRKFSVGASGLGLGLARALAADGRG
TRDAAGAAVGEPVGGASACLAGSCSQATLQQVAAAEAIMPVLRLDPARLLAGDDVVAEALAFAEERLASGPVLIATSAPP
EAVRALQAAHGVDAAGHAIEAALAAIAEGLVARGVRRLVVAGGETSGAVVDRLGLTAFLLGPEIAAGVPVLRTAGRPEPM
LLALKSGNFGGADFFGRALDMMA

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=389, Percent_Identity=41.3881748071979, Blast_Score=272, Evalue=4e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 42893; Mature: 42762

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLALGCVADDYTGASDLANTLTKAGLRTIQTIGVPEAGRALPEADAVVVALKSRSIPAD
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHH
QAVARSREAERWLRARGAAHVMFKVCSTFDSTDAGNIGPVMDALRADAGETVALVTPAFP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCC
ETGRSVYQGNLFVGSVPLNESPLKDHPLNPMRDANLVRVLGRQSRSPVGLIDTATVARGA
CCCCCEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHH
EAVAARLDALAQEGKGAAIADAIFDSDLEVLGRAILDRKFSVGASGLGLGLARALAADGR
HHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
GTRDAAGAAVGEPVGGASACLAGSCSQATLQQVAAAEAIMPVLRLDPARLLAGDDVVAEA
CCCHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHH
LAFAEERLASGPVLIATSAPPEAVRALQAAHGVDAAGHAIEAALAAIAEGLVARGVRRLV
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
VAGGETSGAVVDRLGLTAFLLGPEIAAGVPVLRTAGRPEPMLLALKSGNFGGADFFGRAL
EECCCCCCHHHHHHHHHHEEECCHHHCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHH
DMMA
HHCC
>Mature Secondary Structure 
SLALGCVADDYTGASDLANTLTKAGLRTIQTIGVPEAGRALPEADAVVVALKSRSIPAD
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHH
QAVARSREAERWLRARGAAHVMFKVCSTFDSTDAGNIGPVMDALRADAGETVALVTPAFP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCC
ETGRSVYQGNLFVGSVPLNESPLKDHPLNPMRDANLVRVLGRQSRSPVGLIDTATVARGA
CCCCCEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHH
EAVAARLDALAQEGKGAAIADAIFDSDLEVLGRAILDRKFSVGASGLGLGLARALAADGR
HHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
GTRDAAGAAVGEPVGGASACLAGSCSQATLQQVAAAEAIMPVLRLDPARLLAGDDVVAEA
CCCHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHH
LAFAEERLASGPVLIATSAPPEAVRALQAAHGVDAAGHAIEAALAAIAEGLVARGVRRLV
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
VAGGETSGAVVDRLGLTAFLLGPEIAAGVPVLRTAGRPEPMLLALKSGNFGGADFFGRAL
EECCCCCCHHHHHHHHHHEEECCHHHCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHH
DMMA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]