| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yfhM [H]
Identifier: 170747411
GI number: 170747411
Start: 1035696
End: 1036715
Strand: Reverse
Name: yfhM [H]
Synonym: Mrad2831_0978
Alternate gene names: 170747411
Gene position: 1036715-1035696 (Counterclockwise)
Preceding gene: 170747414
Following gene: 170747409
Centisome position: 17.06
GC content: 71.37
Gene sequence:
>1020_bases ATGCTCCGAAACCTCCTCGCCTCCGTCCTGCTGGCCCCGCTGGCCCTGCTGCCGGCGGGACCCGCTTCCGCCGAGCCGCT GCCGCAGCCGACCTACGGGCCGGAACTCGAGGGCTTCGCCTACCCGTTCCCGGTGGAGCGGTTCCTGTTCACGTCGCAGC GCCAGCCGCTGCAGATGGCCTATCTCGATGTCCGCCCGGCGACGCCGAACGGCCGGACCGCGGTGCTGCTGCACGGCAAG AACTTCTGCGCCGCCACCTGGGAGAGCCAGATCCGGGCGCTCAGCGCGGCCGGGTACCGGGTGATCGCGCCGGACCAGAT CGGCTTCTGCAAGTCGAGCAAGCCGGCGGCCTACCAGTTCACCTTCCGGCAACTCGCCGAGAACACCCACGCGCTCCTGG CCAAGCTCGGGATCGAGCGCCCGATCCTGGTCGGCCACTCCACGGGCGGCATGCTGGCCGCCCACTACGCCCTGCTCTAC CCGAAGGCGGTGGAGCAGCTCGTGCTGGTCAACCCGATCGGCCTGGAGGACTGGGCCGCCAAGGGCGTGCCGCCGACCTC GGTCGAGCAATGGTACCAGCGCGAGCTGAAGGTGACGGCGGCCTCGATCCGGGCCTACGAGACGGCGACCTACTACGCCG GCGCCTGGGAGCCCCGCTACGAGCCCTGGGTCACGATGCTGGCGGGCCTCAACGGCGGCCCCGGCAAGGAGGCGGTCGCC TGGGACTCGGCGCTGCTCTACGACATGATCCTCACCGAGCCGGTGGTCTACCGGTTCCCGCAGATCGCGGTGCCGACGCT GCTCCTGATCGGCCAGAAGGACAACACGGCGATCGGCAAGGACCTCGCGCCGCCGGAGGTGCGGGCGAGCCTCGGCAACT ATCCCGAACTCGGCAAGGCGGCCGCCAGGGCCATCCCGGGCGCGCGGCTCGTGGAGTTCCCGGATCTCGGCCACGCGCCG CAGATGTCCGACCCGGACGGGTTCAACGCGGCGCTGATCGCGGGCATCGCGGCGCGGTAG
Upstream 100 bases:
>100_bases CGCGGCGCTCCGCGGGGCGTGGACAGGGGCGCCCGGATGACCGATCTGAGCGGGCGGCGCGGCGCCGCACGCCGCTCGCA GACCAGGCTCCGACGCGGCC
Downstream 100 bases:
>100_bases GCGCCGCGCGACGTCGCCCGTCGTCCCGGGGCGCTCGCGGCGCCCCGGGACGACGGCGGGCCGGTCCTAGAAGTACGACT TCAGCACGCCCCGGCGGCGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MLRNLLASVLLAPLALLPAGPASAEPLPQPTYGPELEGFAYPFPVERFLFTSQRQPLQMAYLDVRPATPNGRTAVLLHGK NFCAATWESQIRALSAAGYRVIAPDQIGFCKSSKPAAYQFTFRQLAENTHALLAKLGIERPILVGHSTGGMLAAHYALLY PKAVEQLVLVNPIGLEDWAAKGVPPTSVEQWYQRELKVTAASIRAYETATYYAGAWEPRYEPWVTMLAGLNGGPGKEAVA WDSALLYDMILTEPVVYRFPQIAVPTLLLIGQKDNTAIGKDLAPPEVRASLGNYPELGKAAARAIPGARLVEFPDLGHAP QMSDPDGFNAALIAGIAAR
Sequences:
>Translated_339_residues MLRNLLASVLLAPLALLPAGPASAEPLPQPTYGPELEGFAYPFPVERFLFTSQRQPLQMAYLDVRPATPNGRTAVLLHGK NFCAATWESQIRALSAAGYRVIAPDQIGFCKSSKPAAYQFTFRQLAENTHALLAKLGIERPILVGHSTGGMLAAHYALLY PKAVEQLVLVNPIGLEDWAAKGVPPTSVEQWYQRELKVTAASIRAYETATYYAGAWEPRYEPWVTMLAGLNGGPGKEAVA WDSALLYDMILTEPVVYRFPQIAVPTLLLIGQKDNTAIGKDLAPPEVRASLGNYPELGKAAARAIPGARLVEFPDLGHAP QMSDPDGFNAALIAGIAAR >Mature_339_residues MLRNLLASVLLAPLALLPAGPASAEPLPQPTYGPELEGFAYPFPVERFLFTSQRQPLQMAYLDVRPATPNGRTAVLLHGK NFCAATWESQIRALSAAGYRVIAPDQIGFCKSSKPAAYQFTFRQLAENTHALLAKLGIERPILVGHSTGGMLAAHYALLY PKAVEQLVLVNPIGLEDWAAKGVPPTSVEQWYQRELKVTAASIRAYETATYYAGAWEPRYEPWVTMLAGLNGGPGKEAVA WDSALLYDMILTEPVVYRFPQIAVPTLLLIGQKDNTAIGKDLAPPEVRASLGNYPELGKAAARAIPGARLVEFPDLGHAP QMSDPDGFNAALIAGIAAR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=103, Percent_Identity=35.9223300970874, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 36629; Mature: 36629
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNLLASVLLAPLALLPAGPASAEPLPQPTYGPELEGFAYPFPVERFLFTSQRQPLQMA CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEE YLDVRPATPNGRTAVLLHGKNFCAATWESQIRALSAAGYRVIAPDQIGFCKSSKPAAYQF EEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHH TFRQLAENTHALLAKLGIERPILVGHSTGGMLAAHYALLYPKAVEQLVLVNPIGLEDWAA HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHC KGVPPTSVEQWYQRELKVTAASIRAYETATYYAGAWEPRYEPWVTMLAGLNGGPGKEAVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCCCCCCCCHHH WDSALLYDMILTEPVVYRFPQIAVPTLLLIGQKDNTAIGKDLAPPEVRASLGNYPELGKA HHHHHHHHHHHHCHHHHHCCCHHHCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHHH AARAIPGARLVEFPDLGHAPQMSDPDGFNAALIAGIAAR HHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MLRNLLASVLLAPLALLPAGPASAEPLPQPTYGPELEGFAYPFPVERFLFTSQRQPLQMA CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEE YLDVRPATPNGRTAVLLHGKNFCAATWESQIRALSAAGYRVIAPDQIGFCKSSKPAAYQF EEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHH TFRQLAENTHALLAKLGIERPILVGHSTGGMLAAHYALLYPKAVEQLVLVNPIGLEDWAA HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHC KGVPPTSVEQWYQRELKVTAASIRAYETATYYAGAWEPRYEPWVTMLAGLNGGPGKEAVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCCCCCCCCHHH WDSALLYDMILTEPVVYRFPQIAVPTLLLIGQKDNTAIGKDLAPPEVRASLGNYPELGKA HHHHHHHHHHHHCHHHHHCCCHHHCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHHH AARAIPGARLVEFPDLGHAPQMSDPDGFNAALIAGIAAR HHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]