| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170747407
Identifier: 170747407
GI number: 170747407
Start: 1031222
End: 1032430
Strand: Reverse
Name: 170747407
Synonym: Mrad2831_0974
Alternate gene names: NA
Gene position: 1032430-1031222 (Counterclockwise)
Preceding gene: 170747408
Following gene: 170747406
Centisome position: 16.99
GC content: 71.38
Gene sequence:
>1209_bases ATGGATGTCTCCTCCCTGGCGCTGCACGGCCTCTCGTGGCTCTCGCTGCTCTGCCTGATCCTGGCGGCGGCGGGCTGCGT CTACGGGCTGGCCGCCGCCATCTGCGCGGGCCGCTACGCGGGCCGACGCCCGCCGGCGCTCCCCGGGGGAGCCCCGCGGC CCTCCGTGACCGTGCTGAAGCCGCTCTGCGGCCTCGAGCCCAACCTCTACGCGAATCTCGAGACCGTTCTGCGCCAGGAC TACGCCGGGCCGGTCCAGGTCGTGTTCGGCGTCCAGAAGCCCACCGATCCCGCGATCGGCGTGATCGAGCGCCTGCAGCA GGCCTATCCGGAGGCCCGCATCGACCTCGTGATCGACGGCCGGCAGCACGGATCGAACCGCAAGGTCTCGAACCTGATCA ACATGGCCGAGGCCATCGCCCACGACGTGGTGGTGCTGGCCGACAGCGACATGGTGGTCGGCCCCGACTACCTGGAGCGC CTCGTCGCGGAGCTGTCGCAGGACGGCGTCACCGGCGTGACCTGCCTGTACCACGGCGTCCCGGCCTTCCGGGGCCTGTA CGATCAGCTCTCGACGCTCGCGATCGACACCCACTTCCTGCCCAACGTGGTGATGGGCCTGAGCCTCGGGCTGGCGAAGC CCTGCTTCGGCTCCACCGTGGCCTTCACCCGGGCGAGCCTGGAGGCGGTCGGCGGCTTCCGAACCTTCCGCAACGATCTG GCGGACGACTACGCCATCGGCGCGGCCCTGCGCGGACTCGGCGGCCGCGTGGTGATCCCGAGCTTCACGATCGGCCACAC CAGCGTCGACACCGATCTCTCCGGGCTGTGGCGGCACGAGCTGCGCTGGAACCGGACGATCCGCACCGTCGACCCGGCCG GCTACGCCGGCTCGATCGTCACCCACGCCTTTCCCCTCGCCCTGCTGGGCGCGCTCCTGCCCGGCGCCGGGACCGGCGCG CTCTGGGTCGCCGCCGCGGCGCTGGCGAGCCGCGTGCTGCTCTGCCGGCAGCTGGAGCGGGCCTTCGGCCTCGCCCCGCA CCCCTACGGACTGTTGCCGATCCGCGACATCCTCTCCTTCCTGAACTTCTCCTGGGCCTTCGTGTCGGGGGCGGTGACAT GGAAAGGTCACGATTATCACGTGGTTGCGGATGGCACCCTGATCCCGGACGCCGAACTCGGCCGCGATGCCGGCGCGCCG CTCCGCTGA
Upstream 100 bases:
>100_bases AGCCGACCCCCTGAGGATCGCCGGCGCCAGCGCCGACCTGAACCGGCCGCTCGCGGCCATCGCCGCCTCGGCGGCCGGAC GACCGCACGGACCCGACCGG
Downstream 100 bases:
>100_bases ACCCGGCTCCCTCGTCCTCCGCCCTCCCCCCGGCATTGCCCTGAGGCCTTGAACCCCATGCGCACGCTCTTCCTCCAGGC CCCCACCTTCGACGGTTTCG
Product: hopanoid biosynthesis associated glycosyl transferase protein HpnI
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MDVSSLALHGLSWLSLLCLILAAAGCVYGLAAAICAGRYAGRRPPALPGGAPRPSVTVLKPLCGLEPNLYANLETVLRQD YAGPVQVVFGVQKPTDPAIGVIERLQQAYPEARIDLVIDGRQHGSNRKVSNLINMAEAIAHDVVVLADSDMVVGPDYLER LVAELSQDGVTGVTCLYHGVPAFRGLYDQLSTLAIDTHFLPNVVMGLSLGLAKPCFGSTVAFTRASLEAVGGFRTFRNDL ADDYAIGAALRGLGGRVVIPSFTIGHTSVDTDLSGLWRHELRWNRTIRTVDPAGYAGSIVTHAFPLALLGALLPGAGTGA LWVAAAALASRVLLCRQLERAFGLAPHPYGLLPIRDILSFLNFSWAFVSGAVTWKGHDYHVVADGTLIPDAELGRDAGAP LR
Sequences:
>Translated_402_residues MDVSSLALHGLSWLSLLCLILAAAGCVYGLAAAICAGRYAGRRPPALPGGAPRPSVTVLKPLCGLEPNLYANLETVLRQD YAGPVQVVFGVQKPTDPAIGVIERLQQAYPEARIDLVIDGRQHGSNRKVSNLINMAEAIAHDVVVLADSDMVVGPDYLER LVAELSQDGVTGVTCLYHGVPAFRGLYDQLSTLAIDTHFLPNVVMGLSLGLAKPCFGSTVAFTRASLEAVGGFRTFRNDL ADDYAIGAALRGLGGRVVIPSFTIGHTSVDTDLSGLWRHELRWNRTIRTVDPAGYAGSIVTHAFPLALLGALLPGAGTGA LWVAAAALASRVLLCRQLERAFGLAPHPYGLLPIRDILSFLNFSWAFVSGAVTWKGHDYHVVADGTLIPDAELGRDAGAP LR >Mature_402_residues MDVSSLALHGLSWLSLLCLILAAAGCVYGLAAAICAGRYAGRRPPALPGGAPRPSVTVLKPLCGLEPNLYANLETVLRQD YAGPVQVVFGVQKPTDPAIGVIERLQQAYPEARIDLVIDGRQHGSNRKVSNLINMAEAIAHDVVVLADSDMVVGPDYLER LVAELSQDGVTGVTCLYHGVPAFRGLYDQLSTLAIDTHFLPNVVMGLSLGLAKPCFGSTVAFTRASLEAVGGFRTFRNDL ADDYAIGAALRGLGGRVVIPSFTIGHTSVDTDLSGLWRHELRWNRTIRTVDPAGYAGSIVTHAFPLALLGALLPGAGTGA LWVAAAALASRVLLCRQLERAFGLAPHPYGLLPIRDILSFLNFSWAFVSGAVTWKGHDYHVVADGTLIPDAELGRDAGAP LR
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=259, Percent_Identity=27.7992277992278, Blast_Score=99, Evalue=6e-21, Organism=Caenorhabditis elegans, GI25147526, Length=388, Percent_Identity=21.3917525773196, Blast_Score=98, Evalue=7e-21, Organism=Caenorhabditis elegans, GI32566973, Length=283, Percent_Identity=25.4416961130742, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24657569, Length=263, Percent_Identity=29.277566539924, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42643; Mature: 42643
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVSSLALHGLSWLSLLCLILAAAGCVYGLAAAICAGRYAGRRPPALPGGAPRPSVTVLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH PLCGLEPNLYANLETVLRQDYAGPVQVVFGVQKPTDPAIGVIERLQQAYPEARIDLVIDG HHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEC RQHGSNRKVSNLINMAEAIAHDVVVLADSDMVVGPDYLERLVAELSQDGVTGVTCLYHGV CCCCCCHHHHHHHHHHHHHHHCEEEEECCCEEECHHHHHHHHHHHHCCCCCHHHHHHHCC PAFRGLYDQLSTLAIDTHFLPNVVMGLSLGLAKPCFGSTVAFTRASLEAVGGFRTFRNDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ADDYAIGAALRGLGGRVVIPSFTIGHTSVDTDLSGLWRHELRWNRTIRTVDPAGYAGSIV HHHHHHHHHHHCCCCEEEECCEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHH THAFPLALLGALLPGAGTGALWVAAAALASRVLLCRQLERAFGLAPHPYGLLPIRDILSF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LNFSWAFVSGAVTWKGHDYHVVADGTLIPDAELGRDAGAPLR HCCHHHHHCCEEEECCCEEEEEECCEECCCHHHCCCCCCCCC >Mature Secondary Structure MDVSSLALHGLSWLSLLCLILAAAGCVYGLAAAICAGRYAGRRPPALPGGAPRPSVTVLK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH PLCGLEPNLYANLETVLRQDYAGPVQVVFGVQKPTDPAIGVIERLQQAYPEARIDLVIDG HHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEC RQHGSNRKVSNLINMAEAIAHDVVVLADSDMVVGPDYLERLVAELSQDGVTGVTCLYHGV CCCCCCHHHHHHHHHHHHHHHCEEEEECCCEEECHHHHHHHHHHHHCCCCCHHHHHHHCC PAFRGLYDQLSTLAIDTHFLPNVVMGLSLGLAKPCFGSTVAFTRASLEAVGGFRTFRNDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ADDYAIGAALRGLGGRVVIPSFTIGHTSVDTDLSGLWRHELRWNRTIRTVDPAGYAGSIV HHHHHHHHHHHCCCCEEEECCEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHH THAFPLALLGALLPGAGTGALWVAAAALASRVLLCRQLERAFGLAPHPYGLLPIRDILSF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LNFSWAFVSGAVTWKGHDYHVVADGTLIPDAELGRDAGAPLR HCCHHHHHCCEEEECCCEEEEEECCEECCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA