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The map label for this gene is yoaB [C]

Identifier: 170747369

GI number: 170747369

Start: 982915

End: 983271

Strand: Reverse

Name: yoaB [C]

Synonym: Mrad2831_0936

Alternate gene names: 170747369

Gene position: 983271-982915 (Counterclockwise)

Preceding gene: 170747371

Following gene: 170747368

Centisome position: 16.18

GC content: 69.47

Gene sequence:

>357_bases
ATGGACATTCAGCGTATCGAGCCGAGCAAGCGGATGTCGCAGGCCGTCACCTTCGGCGACATGGTCTACCTCGCCGGGCA
GGTCGCGTCCGACACGGTCGGCACCGGGGTCACGATCCAGACCCAGCAGATCCTGTCGGAGATCGACCGGCTCCTGGCCG
CGGCCGGCAGCGACAAGGCGCGGATCCTCTCGGCCACCGTCTATCTCGCCGATATCGCGACCTTCGCGGAGATGAACGCC
GCCTGGGACGCGTGGGTCTCCCCGGAGAACCCGCCGGCCCGCGCCACGGTCGAGGCCAAGCTCGCCGCGCCCGAGTACCT
GGTCGAGATCGTGGTCGTGGCCGCGAGGAGCCGGTGA

Upstream 100 bases:

>100_bases
CGATTTTCCTCGGGTTCAAGCCTCGCGTGCGCGCGCGGCCCTTTACGGCCAGGCCGGTGCGGCGGCAGATACGCCGGTTC
TCGAGGATGTGGAGACGGGT

Downstream 100 bases:

>100_bases
ACGGCGCGCGCCGGACCGTCCTGGCGGCCGCTGCAGCCGTTCTCGCGGGAGGGCTCCTGGCGGCCCTGCCCCTCGTGCGG
CCGGCACCGGCCGCCGAGGA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MDIQRIEPSKRMSQAVTFGDMVYLAGQVASDTVGTGVTIQTQQILSEIDRLLAAAGSDKARILSATVYLADIATFAEMNA
AWDAWVSPENPPARATVEAKLAAPEYLVEIVVVAARSR

Sequences:

>Translated_118_residues
MDIQRIEPSKRMSQAVTFGDMVYLAGQVASDTVGTGVTIQTQQILSEIDRLLAAAGSDKARILSATVYLADIATFAEMNA
AWDAWVSPENPPARATVEAKLAAPEYLVEIVVVAARSR
>Mature_118_residues
MDIQRIEPSKRMSQAVTFGDMVYLAGQVASDTVGTGVTIQTQQILSEIDRLLAAAGSDKARILSATVYLADIATFAEMNA
AWDAWVSPENPPARATVEAKLAAPEYLVEIVVVAARSR

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=115, Percent_Identity=42.6086956521739, Blast_Score=88, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12653; Mature: 12653

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQRIEPSKRMSQAVTFGDMVYLAGQVASDTVGTGVTIQTQQILSEIDRLLAAAGSDKA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCH
RILSATVYLADIATFAEMNAAWDAWVSPENPPARATVEAKLAAPEYLVEIVVVAARSR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIQRIEPSKRMSQAVTFGDMVYLAGQVASDTVGTGVTIQTQQILSEIDRLLAAAGSDKA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCH
RILSATVYLADIATFAEMNAAWDAWVSPENPPARATVEAKLAAPEYLVEIVVVAARSR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA