| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is bioA [H]
Identifier: 170747298
GI number: 170747298
Start: 907758
End: 909023
Strand: Reverse
Name: bioA [H]
Synonym: Mrad2831_0865
Alternate gene names: 170747298
Gene position: 909023-907758 (Counterclockwise)
Preceding gene: 170747302
Following gene: 170747297
Centisome position: 14.96
GC content: 74.17
Gene sequence:
>1266_bases ATGACCCTCGCGACGCCCGCAGGCCATCTCTGGCGGCCCTACACCCAGATGCGACACGCGGCGGCGCCCCTGGAGGCGGT CGCGACCCACGGCACCCGCATCCGCCTCGCCGACGGTCGCGAGCTCGTGGACGGCATCGCTTCCTGGTGGACCGCCGTGC ACGGCTACAATCACCCGCACATAGCGGGCGCGGTGGCCGAGCAGCTCGCGCGCATGCCCCACGTGATGTTCGGCGGCCTC ACCCACGCGCCGGCGGAGGCACTGGCCCGGCGGCTCGCCGCCCTGCTGCCGGGCGATCTCGACCACGTCTTCCTCAGCGA TTCGGGCTCGGTCGCCGTGGAGGTCGCGCTCAAGATGGCGGCGCAGATGTGGATCAACCGCGGGGTGAGCGGTCGGACGA AGGTCCTCGCGTTCCGCGGCGGCTACCACGGCGACACGATGGGGGCGATGTCCGTCTGCGACCCCGAGGAGGGCATGCAC CGCCGGTTCGGAGCCTACCTGCCGAGCCAGATCTTCTGCGACCTGCCGCGGGGCGCGGCCGAGACCGCGGCGCTCGATGC CGCCCTGGCGGCTTATCGCGACACCCTGGCGGCGGTGATCGTCGAGCCGCTGGTGCAGGGGGCCGGCGGGATGCGGACCC ACCCGCCGGAGGTGCTCGCGACGATCGCCGGGCTGGCGCGCCGCCACGGCCTGCCGCTGATCGCCGACGAGATCTTCACC GGCTTCGGGCGCACCGGCACCCTGTTCGCCTGCGAGCAGGCGGGGATCGTGCCCGACATCCTGTGCCTGTCGAAGGCGCT CACGGGCGGCACGATGGCGCTGGCCGCCACGGTCGCCCGCACGGAGGTGTTCGCGGCGTTCTGGTCCGAGGATCCGGCGG CGGCGCTGATGCACGGCCCGACCTTCATGGCCAATCCCCTCGCCTGCGCCGCGGCCAACGCCAGCCTCGACCTGTTCGAG ACCGAGCCGCGCCTGAGCCAGGCCCGCGCCATCGCGGAGCGCCTCGCCGCGGGGCTGGCGCCGCTGCGGCGCGTGCCCGG CGTGGCGGATGTCCGCGTCCTCGGGGCCATCGGGGCGGTGCAGTTCGCGCGGGCGCCCGACCTGGCCGTCCTGAAGGCGG AGCTGCTCGCCCGCGGCGTCTGGGTGCGGCCGTTCGGCGACATCGTCTACCTCACCCCCGCCCTCACGATCGACGCGGCG GATCTCGACCGGCTGATCGAGGCCGTCGCCGGGGTGGTGACCGAGCTGGCGCCGGGATCGACATGA
Upstream 100 bases:
>100_bases GCTGTCCATGGGGACGGGGATGGGCGGTTCCGCGCCGGCAAAGTCAAGCGGCGGGTGCCGGACCCTTGACCCTCGTCCGA GGCGCCCCCATGCCGGAGGC
Downstream 100 bases:
>100_bases CGCCCGCGCGTTCCACATTCCCGTGACCGGCCCTGGCGCCGGCCTGCAACCCGGGACCGTTTCTGCCGTTGGGCCTACGG CTGGAGATGCGTGCGGCGGC
Product: adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Products: NA
Alternate protein names: 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; Diaminopelargonic acid synthase [H]
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MTLATPAGHLWRPYTQMRHAAAPLEAVATHGTRIRLADGRELVDGIASWWTAVHGYNHPHIAGAVAEQLARMPHVMFGGL THAPAEALARRLAALLPGDLDHVFLSDSGSVAVEVALKMAAQMWINRGVSGRTKVLAFRGGYHGDTMGAMSVCDPEEGMH RRFGAYLPSQIFCDLPRGAAETAALDAALAAYRDTLAAVIVEPLVQGAGGMRTHPPEVLATIAGLARRHGLPLIADEIFT GFGRTGTLFACEQAGIVPDILCLSKALTGGTMALAATVARTEVFAAFWSEDPAAALMHGPTFMANPLACAAANASLDLFE TEPRLSQARAIAERLAAGLAPLRRVPGVADVRVLGAIGAVQFARAPDLAVLKAELLARGVWVRPFGDIVYLTPALTIDAA DLDRLIEAVAGVVTELAPGST
Sequences:
>Translated_421_residues MTLATPAGHLWRPYTQMRHAAAPLEAVATHGTRIRLADGRELVDGIASWWTAVHGYNHPHIAGAVAEQLARMPHVMFGGL THAPAEALARRLAALLPGDLDHVFLSDSGSVAVEVALKMAAQMWINRGVSGRTKVLAFRGGYHGDTMGAMSVCDPEEGMH RRFGAYLPSQIFCDLPRGAAETAALDAALAAYRDTLAAVIVEPLVQGAGGMRTHPPEVLATIAGLARRHGLPLIADEIFT GFGRTGTLFACEQAGIVPDILCLSKALTGGTMALAATVARTEVFAAFWSEDPAAALMHGPTFMANPLACAAANASLDLFE TEPRLSQARAIAERLAAGLAPLRRVPGVADVRVLGAIGAVQFARAPDLAVLKAELLARGVWVRPFGDIVYLTPALTIDAA DLDRLIEAVAGVVTELAPGST >Mature_420_residues TLATPAGHLWRPYTQMRHAAAPLEAVATHGTRIRLADGRELVDGIASWWTAVHGYNHPHIAGAVAEQLARMPHVMFGGLT HAPAEALARRLAALLPGDLDHVFLSDSGSVAVEVALKMAAQMWINRGVSGRTKVLAFRGGYHGDTMGAMSVCDPEEGMHR RFGAYLPSQIFCDLPRGAAETAALDAALAAYRDTLAAVIVEPLVQGAGGMRTHPPEVLATIAGLARRHGLPLIADEIFTG FGRTGTLFACEQAGIVPDILCLSKALTGGTMALAATVARTEVFAAFWSEDPAAALMHGPTFMANPLACAAANASLDLFET EPRLSQARAIAERLAAGLAPLRRVPGVADVRVLGAIGAVQFARAPDLAVLKAELLARGVWVRPFGDIVYLTPALTIDAAD LDRLIEAVAGVVTELAPGST
Specific function: Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily [H]
Homologues:
Organism=Homo sapiens, GI13994255, Length=428, Percent_Identity=26.1682242990654, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI4557809, Length=418, Percent_Identity=27.9904306220096, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI284507298, Length=318, Percent_Identity=30.188679245283, Blast_Score=99, Evalue=9e-21, Organism=Homo sapiens, GI37574042, Length=384, Percent_Identity=24.21875, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI226442709, Length=331, Percent_Identity=24.773413897281, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI226442705, Length=375, Percent_Identity=24.2666666666667, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI1786991, Length=420, Percent_Identity=51.1904761904762, Blast_Score=387, Evalue=1e-109, Organism=Escherichia coli, GI145693181, Length=380, Percent_Identity=34.2105263157895, Blast_Score=171, Evalue=6e-44, Organism=Escherichia coli, GI1789016, Length=420, Percent_Identity=31.6666666666667, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1787560, Length=393, Percent_Identity=31.8066157760814, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1789759, Length=410, Percent_Identity=32.9268292682927, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1788044, Length=411, Percent_Identity=31.8734793187348, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1786349, Length=328, Percent_Identity=32.0121951219512, Blast_Score=115, Evalue=5e-27, Organism=Caenorhabditis elegans, GI25144271, Length=409, Percent_Identity=26.161369193154, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI32564660, Length=462, Percent_Identity=25.1082251082251, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25144274, Length=309, Percent_Identity=27.1844660194175, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71992977, Length=401, Percent_Identity=24.1895261845387, Blast_Score=92, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6324386, Length=453, Percent_Identity=34.878587196468, Blast_Score=289, Evalue=4e-79, Organism=Saccharomyces cerevisiae, GI6323470, Length=431, Percent_Identity=26.6821345707657, Blast_Score=128, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6324432, Length=405, Percent_Identity=29.6296296296296, Blast_Score=125, Evalue=1e-29, Organism=Drosophila melanogaster, GI28574759, Length=454, Percent_Identity=27.5330396475771, Blast_Score=118, Evalue=6e-27, Organism=Drosophila melanogaster, GI161085790, Length=442, Percent_Identity=27.6018099547511, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI21357415, Length=408, Percent_Identity=25.2450980392157, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI21356575, Length=437, Percent_Identity=25.1716247139588, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR005815 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.62 [H]
Molecular weight: Translated: 44209; Mature: 44077
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLATPAGHLWRPYTQMRHAAAPLEAVATHGTRIRLADGRELVDGIASWWTAVHGYNHPH CCCCCCCCHHCCCHHHHHHHHCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCH IAGAVAEQLARMPHVMFGGLTHAPAEALARRLAALLPGDLDHVFLSDSGSVAVEVALKMA HHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH AQMWINRGVSGRTKVLAFRGGYHGDTMGAMSVCDPEEGMHRRFGAYLPSQIFCDLPRGAA HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCH ETAALDAALAAYRDTLAAVIVEPLVQGAGGMRTHPPEVLATIAGLARRHGLPLIADEIFT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH GFGRTGTLFACEQAGIVPDILCLSKALTGGTMALAATVARTEVFAAFWSEDPAAALMHGP CCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC TFMANPLACAAANASLDLFETEPRLSQARAIAERLAAGLAPLRRVPGVADVRVLGAIGAV CHHCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QFARAPDLAVLKAELLARGVWVRPFGDIVYLTPALTIDAADLDRLIEAVAGVVTELAPGS HHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEECHHHHHHHHHHHHHHHHHCCCCC T C >Mature Secondary Structure TLATPAGHLWRPYTQMRHAAAPLEAVATHGTRIRLADGRELVDGIASWWTAVHGYNHPH CCCCCCCHHCCCHHHHHHHHCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCH IAGAVAEQLARMPHVMFGGLTHAPAEALARRLAALLPGDLDHVFLSDSGSVAVEVALKMA HHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH AQMWINRGVSGRTKVLAFRGGYHGDTMGAMSVCDPEEGMHRRFGAYLPSQIFCDLPRGAA HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCH ETAALDAALAAYRDTLAAVIVEPLVQGAGGMRTHPPEVLATIAGLARRHGLPLIADEIFT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH GFGRTGTLFACEQAGIVPDILCLSKALTGGTMALAATVARTEVFAAFWSEDPAAALMHGP CCCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC TFMANPLACAAANASLDLFETEPRLSQARAIAERLAAGLAPLRRVPGVADVRVLGAIGAV CHHCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QFARAPDLAVLKAELLARGVWVRPFGDIVYLTPALTIDAADLDRLIEAVAGVVTELAPGS HHHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEECHHHHHHHHHHHHHHHHHCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8890743 [H]