| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170747296
Identifier: 170747296
GI number: 170747296
Start: 906523
End: 907149
Strand: Reverse
Name: 170747296
Synonym: Mrad2831_0863
Alternate gene names: NA
Gene position: 907149-906523 (Counterclockwise)
Preceding gene: 170747297
Following gene: 170747294
Centisome position: 14.93
GC content: 73.68
Gene sequence:
>627_bases GTGCAGATTCAGGATCGTCCGGCGGCCGCCGGCACTAATTCGGGCGCTCCGGTGGGCGACAAGCAGAAGCGCGATCATCG GGACGAGGCGGCCGCCGTGCTCGGCCTCCCGTCGAAGAAGCTGAGGCCACCCGGCGTGCGCAGCGTCGGCTGGGCCCTGG TCCAGGCGGCGCGCCTGCACCGGGCGCGGACCGGCGACCGCTTAGCCAAGCTCGGCCTGTTCGCCGGTCAGGAACAGGTG GTGCAGGCGCTGGCCGCGGCCGGCACGATGACGATGGGCGATCTCGCCGCCCTGCTGCGCGTCCGACCGCCCACCGCCTC CAAGACCGTCACGCGGCTCGCCGCCCTCGGCATTGTCGAGCGCCGGGCCGAATCGGGCGACGGCCGCGTGGTCCGGGTCC AGCTCACGGAGGCCGGCATGGCCAAGGCCGAGGCCATCGAGCGGATCCAGGAGGAGGTCGAGGCCGAGCTGCTCGACCAC CTCGACAAGACCGATCGCCGCCGCCTCCGGAAGCTTCTGCGGAAGGCGGCCCGCGGCCTCGCCGAGGCGGCCGGCGCCTC CGGTCAGACGACCGAGGCAGACGCCGAGATCGAAGCCGAGGACGAGGCCGAGGCGCTGGCGACCTGA
Upstream 100 bases:
>100_bases TCTCATGCACTGCTGAGCGGACCTCCGCGCCGGCCCCGTCATCCCACCGTCACCGGTCGTCGCCACAGGGACCTGGGCGG CCGCTTGATGGGGGTGGACG
Downstream 100 bases:
>100_bases CCGCCGGCCTCAGGCCGCGCGGCGCCACGCCGGGAACGGGTCCGGCAGGCCGCGATAGGGCGCGGGATCGAACGGCTCCC GGTCCGCACCGGTCTCGATC
Product: transcriptional regulator TrmB
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator TrmB; Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MQIQDRPAAAGTNSGAPVGDKQKRDHRDEAAAVLGLPSKKLRPPGVRSVGWALVQAARLHRARTGDRLAKLGLFAGQEQV VQALAAAGTMTMGDLAALLRVRPPTASKTVTRLAALGIVERRAESGDGRVVRVQLTEAGMAKAEAIERIQEEVEAELLDH LDKTDRRRLRKLLRKAARGLAEAAGASGQTTEADAEIEAEDEAEALAT
Sequences:
>Translated_208_residues MQIQDRPAAAGTNSGAPVGDKQKRDHRDEAAAVLGLPSKKLRPPGVRSVGWALVQAARLHRARTGDRLAKLGLFAGQEQV VQALAAAGTMTMGDLAALLRVRPPTASKTVTRLAALGIVERRAESGDGRVVRVQLTEAGMAKAEAIERIQEEVEAELLDH LDKTDRRRLRKLLRKAARGLAEAAGASGQTTEADAEIEAEDEAEALAT >Mature_208_residues MQIQDRPAAAGTNSGAPVGDKQKRDHRDEAAAVLGLPSKKLRPPGVRSVGWALVQAARLHRARTGDRLAKLGLFAGQEQV VQALAAAGTMTMGDLAALLRVRPPTASKTVTRLAALGIVERRAESGDGRVVRVQLTEAGMAKAEAIERIQEEVEAELLDH LDKTDRRRLRKLLRKAARGLAEAAGASGQTTEADAEIEAEDEAEALAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22104; Mature: 22104
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIQDRPAAAGTNSGAPVGDKQKRDHRDEAAAVLGLPSKKLRPPGVRSVGWALVQAARLH CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH RARTGDRLAKLGLFAGQEQVVQALAAAGTMTMGDLAALLRVRPPTASKTVTRLAALGIVE HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RRAESGDGRVVRVQLTEAGMAKAEAIERIQEEVEAELLDHLDKTDRRRLRKLLRKAARGL HHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH AEAAGASGQTTEADAEIEAEDEAEALAT HHHCCCCCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MQIQDRPAAAGTNSGAPVGDKQKRDHRDEAAAVLGLPSKKLRPPGVRSVGWALVQAARLH CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH RARTGDRLAKLGLFAGQEQVVQALAAAGTMTMGDLAALLRVRPPTASKTVTRLAALGIVE HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RRAESGDGRVVRVQLTEAGMAKAEAIERIQEEVEAELLDHLDKTDRRRLRKLLRKAARGL HHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH AEAAGASGQTTEADAEIEAEDEAEALAT HHHCCCCCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA