Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is yodM [H]

Identifier: 170747261

GI number: 170747261

Start: 871134

End: 871892

Strand: Reverse

Name: yodM [H]

Synonym: Mrad2831_0828

Alternate gene names: 170747261

Gene position: 871892-871134 (Counterclockwise)

Preceding gene: 170747262

Following gene: 170747260

Centisome position: 14.35

GC content: 71.67

Gene sequence:

>759_bases
ATGAGGGCGCCGGGCAACCTGCGGCAGAACCGGCTGATCGAGCCCGCCCTGGCAGTGTGGCTGCGGTTGCGCCTGAACGA
GGTCGGCCCCCTCGTCGCCCTGCTCTGCCTGAGCATCCTCGGTTACGGCTTCTTCTACCTCGCGCACGAGGTCGGCGAGG
GCTCCACCGCGGCCCTCGATCGGCGGATCCTGCTCGCCTTGCGCAACCCCGCCGATCTCGCCGACCCGATCGGGCCGCCC
TGGCTCGAGGAATCGATGCGCGACATCACCGGGCTCGGCAGCGTCTTCACCGTGCTGTTCCTGACCTGCGCGGTGGCGGC
CTATCTCGGCGTGTCCGGGCGCCGGCGCATCGGCCTCTACGTCCTCGCCGCGGTGGGCAGCGGCGAGCTGGTCTCGACGG
TGCTGAAGATCTTCTACCATCGGCCGCGGCCGGACCTCGTGCCCCACGGCATGGAGGTGTTCACGGCGAGCTTCCCGAGC
GGCCACGCCACGATGTCGGCGATCGCCTACCTGACCCTGGCGACGCTGATCGCCCGGGTCGAGCGCAACCGCCGCGCCAA
GGCGCTGGTCCTCGCGCTCGGGGTGAGCGTGACGCTCCTCGTCGGCATCAGCCGCATCTATCTCGGCGTGCACTGGCCGA
GCGATGTCCTGGCCGGCTGGTGCATCGGCGCCGCCTGGGCCTCCCTGTGCTGGTTCGTTGCCCTGCAGTTGCAGCGCCGC
GGCGAGGTCGAGGCGCCCGACCCGCCGCCGCCCGCCTGA

Upstream 100 bases:

>100_bases
CTGCTCTGGCGCTACCGCGGCGGCCCCTGGGACGCCGTCGCCCGCCTGCCCTTCGGAGAGAATACCTGATGGTCATCGAC
GCGCGCCGGAGGACGGCAGC

Downstream 100 bases:

>100_bases
GCCCGGCGTTAAGGTAAACGCGCGGTTAAGGTGGACGGGCGGGGCTCGTCCGGGCTGGATGGTGGTTGTCCCCGCAACCG
GAACCATAAGGGTCAAGCGA

Product: PA-phosphatase-like phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRAPGNLRQNRLIEPALAVWLRLRLNEVGPLVALLCLSILGYGFFYLAHEVGEGSTAALDRRILLALRNPADLADPIGPP
WLEESMRDITGLGSVFTVLFLTCAVAAYLGVSGRRRIGLYVLAAVGSGELVSTVLKIFYHRPRPDLVPHGMEVFTASFPS
GHATMSAIAYLTLATLIARVERNRRAKALVLALGVSVTLLVGISRIYLGVHWPSDVLAGWCIGAAWASLCWFVALQLQRR
GEVEAPDPPPPA

Sequences:

>Translated_252_residues
MRAPGNLRQNRLIEPALAVWLRLRLNEVGPLVALLCLSILGYGFFYLAHEVGEGSTAALDRRILLALRNPADLADPIGPP
WLEESMRDITGLGSVFTVLFLTCAVAAYLGVSGRRRIGLYVLAAVGSGELVSTVLKIFYHRPRPDLVPHGMEVFTASFPS
GHATMSAIAYLTLATLIARVERNRRAKALVLALGVSVTLLVGISRIYLGVHWPSDVLAGWCIGAAWASLCWFVALQLQRR
GEVEAPDPPPPA
>Mature_252_residues
MRAPGNLRQNRLIEPALAVWLRLRLNEVGPLVALLCLSILGYGFFYLAHEVGEGSTAALDRRILLALRNPADLADPIGPP
WLEESMRDITGLGSVFTVLFLTCAVAAYLGVSGRRRIGLYVLAAVGSGELVSTVLKIFYHRPRPDLVPHGMEVFTASFPS
GHATMSAIAYLTLATLIARVERNRRAKALVLALGVSVTLLVGISRIYLGVHWPSDVLAGWCIGAAWASLCWFVALQLQRR
GEVEAPDPPPPA

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PA-phosphatase related phosphoesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 27299; Mature: 27299

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPGNLRQNRLIEPALAVWLRLRLNEVGPLVALLCLSILGYGFFYLAHEVGEGSTAALD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RRILLALRNPADLADPIGPPWLEESMRDITGLGSVFTVLFLTCAVAAYLGVSGRRRIGLY
HHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
VLAAVGSGELVSTVLKIFYHRPRPDLVPHGMEVFTASFPSGHATMSAIAYLTLATLIARV
EEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHH
ERNRRAKALVLALGVSVTLLVGISRIYLGVHWPSDVLAGWCIGAAWASLCWFVALQLQRR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEVEAPDPPPPA
CCCCCCCCCCCC
>Mature Secondary Structure
MRAPGNLRQNRLIEPALAVWLRLRLNEVGPLVALLCLSILGYGFFYLAHEVGEGSTAALD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RRILLALRNPADLADPIGPPWLEESMRDITGLGSVFTVLFLTCAVAAYLGVSGRRRIGLY
HHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
VLAAVGSGELVSTVLKIFYHRPRPDLVPHGMEVFTASFPSGHATMSAIAYLTLATLIARV
EEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHH
ERNRRAKALVLALGVSVTLLVGISRIYLGVHWPSDVLAGWCIGAAWASLCWFVALQLQRR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEVEAPDPPPPA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]