| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yodM [H]
Identifier: 170747261
GI number: 170747261
Start: 871134
End: 871892
Strand: Reverse
Name: yodM [H]
Synonym: Mrad2831_0828
Alternate gene names: 170747261
Gene position: 871892-871134 (Counterclockwise)
Preceding gene: 170747262
Following gene: 170747260
Centisome position: 14.35
GC content: 71.67
Gene sequence:
>759_bases ATGAGGGCGCCGGGCAACCTGCGGCAGAACCGGCTGATCGAGCCCGCCCTGGCAGTGTGGCTGCGGTTGCGCCTGAACGA GGTCGGCCCCCTCGTCGCCCTGCTCTGCCTGAGCATCCTCGGTTACGGCTTCTTCTACCTCGCGCACGAGGTCGGCGAGG GCTCCACCGCGGCCCTCGATCGGCGGATCCTGCTCGCCTTGCGCAACCCCGCCGATCTCGCCGACCCGATCGGGCCGCCC TGGCTCGAGGAATCGATGCGCGACATCACCGGGCTCGGCAGCGTCTTCACCGTGCTGTTCCTGACCTGCGCGGTGGCGGC CTATCTCGGCGTGTCCGGGCGCCGGCGCATCGGCCTCTACGTCCTCGCCGCGGTGGGCAGCGGCGAGCTGGTCTCGACGG TGCTGAAGATCTTCTACCATCGGCCGCGGCCGGACCTCGTGCCCCACGGCATGGAGGTGTTCACGGCGAGCTTCCCGAGC GGCCACGCCACGATGTCGGCGATCGCCTACCTGACCCTGGCGACGCTGATCGCCCGGGTCGAGCGCAACCGCCGCGCCAA GGCGCTGGTCCTCGCGCTCGGGGTGAGCGTGACGCTCCTCGTCGGCATCAGCCGCATCTATCTCGGCGTGCACTGGCCGA GCGATGTCCTGGCCGGCTGGTGCATCGGCGCCGCCTGGGCCTCCCTGTGCTGGTTCGTTGCCCTGCAGTTGCAGCGCCGC GGCGAGGTCGAGGCGCCCGACCCGCCGCCGCCCGCCTGA
Upstream 100 bases:
>100_bases CTGCTCTGGCGCTACCGCGGCGGCCCCTGGGACGCCGTCGCCCGCCTGCCCTTCGGAGAGAATACCTGATGGTCATCGAC GCGCGCCGGAGGACGGCAGC
Downstream 100 bases:
>100_bases GCCCGGCGTTAAGGTAAACGCGCGGTTAAGGTGGACGGGCGGGGCTCGTCCGGGCTGGATGGTGGTTGTCCCCGCAACCG GAACCATAAGGGTCAAGCGA
Product: PA-phosphatase-like phosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MRAPGNLRQNRLIEPALAVWLRLRLNEVGPLVALLCLSILGYGFFYLAHEVGEGSTAALDRRILLALRNPADLADPIGPP WLEESMRDITGLGSVFTVLFLTCAVAAYLGVSGRRRIGLYVLAAVGSGELVSTVLKIFYHRPRPDLVPHGMEVFTASFPS GHATMSAIAYLTLATLIARVERNRRAKALVLALGVSVTLLVGISRIYLGVHWPSDVLAGWCIGAAWASLCWFVALQLQRR GEVEAPDPPPPA
Sequences:
>Translated_252_residues MRAPGNLRQNRLIEPALAVWLRLRLNEVGPLVALLCLSILGYGFFYLAHEVGEGSTAALDRRILLALRNPADLADPIGPP WLEESMRDITGLGSVFTVLFLTCAVAAYLGVSGRRRIGLYVLAAVGSGELVSTVLKIFYHRPRPDLVPHGMEVFTASFPS GHATMSAIAYLTLATLIARVERNRRAKALVLALGVSVTLLVGISRIYLGVHWPSDVLAGWCIGAAWASLCWFVALQLQRR GEVEAPDPPPPA >Mature_252_residues MRAPGNLRQNRLIEPALAVWLRLRLNEVGPLVALLCLSILGYGFFYLAHEVGEGSTAALDRRILLALRNPADLADPIGPP WLEESMRDITGLGSVFTVLFLTCAVAAYLGVSGRRRIGLYVLAAVGSGELVSTVLKIFYHRPRPDLVPHGMEVFTASFPS GHATMSAIAYLTLATLIARVERNRRAKALVLALGVSVTLLVGISRIYLGVHWPSDVLAGWCIGAAWASLCWFVALQLQRR GEVEAPDPPPPA
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PA-phosphatase related phosphoesterase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: NA
Molecular weight: Translated: 27299; Mature: 27299
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPGNLRQNRLIEPALAVWLRLRLNEVGPLVALLCLSILGYGFFYLAHEVGEGSTAALD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RRILLALRNPADLADPIGPPWLEESMRDITGLGSVFTVLFLTCAVAAYLGVSGRRRIGLY HHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VLAAVGSGELVSTVLKIFYHRPRPDLVPHGMEVFTASFPSGHATMSAIAYLTLATLIARV EEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHH ERNRRAKALVLALGVSVTLLVGISRIYLGVHWPSDVLAGWCIGAAWASLCWFVALQLQRR HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GEVEAPDPPPPA CCCCCCCCCCCC >Mature Secondary Structure MRAPGNLRQNRLIEPALAVWLRLRLNEVGPLVALLCLSILGYGFFYLAHEVGEGSTAALD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RRILLALRNPADLADPIGPPWLEESMRDITGLGSVFTVLFLTCAVAAYLGVSGRRRIGLY HHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VLAAVGSGELVSTVLKIFYHRPRPDLVPHGMEVFTASFPSGHATMSAIAYLTLATLIARV EEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHH ERNRRAKALVLALGVSVTLLVGISRIYLGVHWPSDVLAGWCIGAAWASLCWFVALQLQRR HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GEVEAPDPPPPA CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]