| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is murI [H]
Identifier: 170747215
GI number: 170747215
Start: 819362
End: 820237
Strand: Reverse
Name: murI [H]
Synonym: Mrad2831_0781
Alternate gene names: 170747215
Gene position: 820237-819362 (Counterclockwise)
Preceding gene: 170747219
Following gene: 170747212
Centisome position: 13.5
GC content: 75.23
Gene sequence:
>876_bases ATGCGGATCGATCTGATGGCCGGAGCCAGCCTGTCCGCCGCCGCGCTGCGCTGCGCCGCCGAGCCGACCATCCTGGTGTT CGATTCCGGCCTCGGCGGCCTGACCGTTCTCGACGCCGTGCGCCGCGCCCGCCCGGACGCACGCTACGTCTACGTGGGCG ACGACGCGGCCTTCCCGTACGGCCGGCTCTCGGAGGCGACCCTCGTCGCGCGCGTCCTCACCGTGATGGAACGGCTGGTC GCGACCCACCGGCCCGACCTCGTGGTGATCGCCTGCAACACCGCCTCGACGCTGGTCCTCCCGGCTCTGCGCCAGCGCTT CACCACGCCCTTCGTGGGGGTCGTGCCGCCGATCAAACCGGCCGCCGAGGCGACGCGCTCGCGGCTCGTCACGCTGCTGG CGACGCCCGGCACGGTGGCGCGCTCCTATACCCACGACCTGATCGCGACCTATGCCGGCACCTGCGCGGTGACGCTGGTC GGCTCGCAGAACCTCGCCGGCTTCGCGGAGGCCGAGCTCGCGGGCGCGCCGGTGGACGACGCCGCCCTCGCCGCCGAGAT CGCCCCCTGCTTCGTCGCCGAGGCCGACGGGCGGCGCACCGACGTGGTCTGCCTCGCCTGCACCCATTACCCGCTGCTGC TACCGCGCCTCCAGGCGGTGGCGCCCTGGCCGGTCACCTGGATCGACCCGGCGCCCGCCATTGCCCGGCGCGTGGTGCAG CTGATCGGCCCCCGCCCCCGCGAGGCGGACCGGCACGGCTCGGCGCTCGGCGCCTTCACGGCCGGCACCTGCCTGACCGA TGCCCTGCGCGCGGCCCTCGCCGACCGGGGCATCGGCGACGTCGCCGTCGAGGCGGTCCCGCTGCCGATGCAGTGA
Upstream 100 bases:
>100_bases AACGGGTTGGGGATCACGGGTCTTTCTCTCGCCGCAGTGAGACTGCCTTAACCCTCGCTGCCGAGATTTTGGGACGCTCT TCGAGGAGTCCGGGGTTCTC
Downstream 100 bases:
>100_bases GGCGCCGCGGCGCCTCGCGTCCTGCCAGGAACTCGATCGATCAGGACTCGATCGGGGCGTGACCGGCTCAGCCCGGCAGG TCTCTCGCTGCGCCGCTTCG
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRIDLMAGASLSAAALRCAAEPTILVFDSGLGGLTVLDAVRRARPDARYVYVGDDAAFPYGRLSEATLVARVLTVMERLV ATHRPDLVVIACNTASTLVLPALRQRFTTPFVGVVPPIKPAAEATRSRLVTLLATPGTVARSYTHDLIATYAGTCAVTLV GSQNLAGFAEAELAGAPVDDAALAAEIAPCFVAEADGRRTDVVCLACTHYPLLLPRLQAVAPWPVTWIDPAPAIARRVVQ LIGPRPREADRHGSALGAFTAGTCLTDALRAALADRGIGDVAVEAVPLPMQ
Sequences:
>Translated_291_residues MRIDLMAGASLSAAALRCAAEPTILVFDSGLGGLTVLDAVRRARPDARYVYVGDDAAFPYGRLSEATLVARVLTVMERLV ATHRPDLVVIACNTASTLVLPALRQRFTTPFVGVVPPIKPAAEATRSRLVTLLATPGTVARSYTHDLIATYAGTCAVTLV GSQNLAGFAEAELAGAPVDDAALAAEIAPCFVAEADGRRTDVVCLACTHYPLLLPRLQAVAPWPVTWIDPAPAIARRVVQ LIGPRPREADRHGSALGAFTAGTCLTDALRAALADRGIGDVAVEAVPLPMQ >Mature_291_residues MRIDLMAGASLSAAALRCAAEPTILVFDSGLGGLTVLDAVRRARPDARYVYVGDDAAFPYGRLSEATLVARVLTVMERLV ATHRPDLVVIACNTASTLVLPALRQRFTTPFVGVVPPIKPAAEATRSRLVTLLATPGTVARSYTHDLIATYAGTCAVTLV GSQNLAGFAEAELAGAPVDDAALAAEIAPCFVAEADGRRTDVVCLACTHYPLLLPRLQAVAPWPVTWIDPAPAIARRVVQ LIGPRPREADRHGSALGAFTAGTCLTDALRAALADRGIGDVAVEAVPLPMQ
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=265, Percent_Identity=43.7735849056604, Blast_Score=184, Evalue=4e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 30466; Mature: 30466
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00923 ASP_GLU_RACEMASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDLMAGASLSAAALRCAAEPTILVFDSGLGGLTVLDAVRRARPDARYVYVGDDAAFPY CEEEEECCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCC GRLSEATLVARVLTVMERLVATHRPDLVVIACNTASTLVLPALRQRFTTPFVGVVPPIKP CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCH AAEATRSRLVTLLATPGTVARSYTHDLIATYAGTCAVTLVGSQNLAGFAEAELAGAPVDD HHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCCCH AALAAEIAPCFVAEADGRRTDVVCLACTHYPLLLPRLQAVAPWPVTWIDPAPAIARRVVQ HHHHHHHHHHEEECCCCCCCEEEEEEECCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHH LIGPRPREADRHGSALGAFTAGTCLTDALRAALADRGIGDVAVEAVPLPMQ HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC >Mature Secondary Structure MRIDLMAGASLSAAALRCAAEPTILVFDSGLGGLTVLDAVRRARPDARYVYVGDDAAFPY CEEEEECCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCC GRLSEATLVARVLTVMERLVATHRPDLVVIACNTASTLVLPALRQRFTTPFVGVVPPIKP CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCH AAEATRSRLVTLLATPGTVARSYTHDLIATYAGTCAVTLVGSQNLAGFAEAELAGAPVDD HHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCCCH AALAAEIAPCFVAEADGRRTDVVCLACTHYPLLLPRLQAVAPWPVTWIDPAPAIARRVVQ HHHHHHHHHHEEECCCCCCCEEEEEEECCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHH LIGPRPREADRHGSALGAFTAGTCLTDALRAALADRGIGDVAVEAVPLPMQ HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA