| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is paaF [C]
Identifier: 170747164
GI number: 170747164
Start: 770636
End: 771448
Strand: Reverse
Name: paaF [C]
Synonym: Mrad2831_0730
Alternate gene names: 170747164
Gene position: 771448-770636 (Counterclockwise)
Preceding gene: 170747165
Following gene: 170747163
Centisome position: 12.69
GC content: 73.92
Gene sequence:
>813_bases ATGACCGCAGCCCTTGCCACGGCCCCCGCCGCCACCCCGGAGGCGCCTGTGCTGCTGCGCAGCGACGCCGACGGCGTCGC GACCCTGACGCTGAACCGGCCGCAGGCCCGCAACGCCCTGTCGATGGCCCTGATGGGCGCGCTCCAGGCGCAGCTCGACG CGATCCGCGCGGATCCGTCCGTGCGGGTCGTGATCCTGCAGGGGGCAGGCCCCGCCTTCTGCGCCGGGCACGACCTCAAG GAGATGCGCGCCGACCCGTCCCGGGAGGCCACCGAGGCGGTGTTCCGCACCTGCGCCCGGCTGATGCTGAGCCTCACGCG CCTGCCGCAACCGGTGATCGCCCGGGTGCACGGGATCGCCACCGCCGCCGGGTGCCAGCTCGTCGCCACCTGCGACCTCG CCGTCTGCGCCGAGACCGCCCGCTTCGCCACGCCGGGGGTGCAGATCGGCCTGTTCTGCTCGACCCCGATGGTCGCCCTG TCGCGGGCCGTGTCGCGCAAGGCCGCCCTGGAGATGCTGCTGGTCGGCGACCCGATCGACGCCGCGGAGGCTCTGCGGAT CGGACTCGTGAACCGCGCCGTGCCGGAGGCGGATCTCGACGCGGCGGTGAGCGCCCTCGCGGCCCGGATCGCCGGCAAGG CCCGGCGCGTCCTGGCGATCGGCAAGGAGGCGTTCGGCCGGCAGATCGAGATGAGCCTGGAGGACGCCTACGGTTACACG GCGGAGGTCATGACCCGCAACATGATGATGGCCGACGCGCAGGAGGGGATCGACGCCTTCCTGGGCAAGCGACCGCCCCG CTGGGAGCCGTGA
Upstream 100 bases:
>100_bases GGCCGGGCCGCGGCGCCGTCGCGAACCGGAAAACCGCGTGCTACCGTCCGGCGACGCGACCGGCCCCGCCGCAGGGAGGC CGGCGCCGGGAGACGCCGCC
Downstream 100 bases:
>100_bases GCCGGCCTCCTGGCGCGATACGACGCAGGCGGTTCTGCGCGGCGCGCGTAGGTGATGGCGCCGCCCTGCTCTAGGATGAG GGCCTGTCCGATCCTGCCGG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTAALATAPAATPEAPVLLRSDADGVATLTLNRPQARNALSMALMGALQAQLDAIRADPSVRVVILQGAGPAFCAGHDLK EMRADPSREATEAVFRTCARLMLSLTRLPQPVIARVHGIATAAGCQLVATCDLAVCAETARFATPGVQIGLFCSTPMVAL SRAVSRKAALEMLLVGDPIDAAEALRIGLVNRAVPEADLDAAVSALAARIAGKARRVLAIGKEAFGRQIEMSLEDAYGYT AEVMTRNMMMADAQEGIDAFLGKRPPRWEP
Sequences:
>Translated_270_residues MTAALATAPAATPEAPVLLRSDADGVATLTLNRPQARNALSMALMGALQAQLDAIRADPSVRVVILQGAGPAFCAGHDLK EMRADPSREATEAVFRTCARLMLSLTRLPQPVIARVHGIATAAGCQLVATCDLAVCAETARFATPGVQIGLFCSTPMVAL SRAVSRKAALEMLLVGDPIDAAEALRIGLVNRAVPEADLDAAVSALAARIAGKARRVLAIGKEAFGRQIEMSLEDAYGYT AEVMTRNMMMADAQEGIDAFLGKRPPRWEP >Mature_269_residues TAALATAPAATPEAPVLLRSDADGVATLTLNRPQARNALSMALMGALQAQLDAIRADPSVRVVILQGAGPAFCAGHDLKE MRADPSREATEAVFRTCARLMLSLTRLPQPVIARVHGIATAAGCQLVATCDLAVCAETARFATPGVQIGLFCSTPMVALS RAVSRKAALEMLLVGDPIDAAEALRIGLVNRAVPEADLDAAVSALAARIAGKARRVLAIGKEAFGRQIEMSLEDAYGYTA EVMTRNMMMADAQEGIDAFLGKRPPRWEP
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=247, Percent_Identity=48.1781376518219, Blast_Score=242, Evalue=2e-64, Organism=Homo sapiens, GI194097323, Length=254, Percent_Identity=33.0708661417323, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI70995211, Length=208, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4502327, Length=257, Percent_Identity=28.0155642023346, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI260274832, Length=255, Percent_Identity=23.921568627451, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI45643119, Length=255, Percent_Identity=23.921568627451, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI260275230, Length=255, Percent_Identity=23.921568627451, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI37594469, Length=142, Percent_Identity=33.0985915492958, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI37594471, Length=142, Percent_Identity=33.0985915492958, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI4757968, Length=246, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI49355787, Length=246, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI4757966, Length=246, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI51538581, Length=246, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI25453481, Length=246, Percent_Identity=26.8292682926829, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI51538573, Length=246, Percent_Identity=26.8292682926829, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI62530384, Length=202, Percent_Identity=30.6930693069307, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI150378541, Length=250, Percent_Identity=28.8, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI221136756, Length=253, Percent_Identity=26.8774703557312, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI221136753, Length=253, Percent_Identity=26.8774703557312, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI221307494, Length=253, Percent_Identity=26.8774703557312, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI157694516, Length=230, Percent_Identity=25.6521739130435, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI213417737, Length=230, Percent_Identity=25.6521739130435, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI295842266, Length=199, Percent_Identity=30.1507537688442, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787659, Length=254, Percent_Identity=34.251968503937, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI221142681, Length=251, Percent_Identity=34.2629482071713, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788597, Length=257, Percent_Identity=31.1284046692607, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787660, Length=249, Percent_Identity=30.9236947791165, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082183, Length=259, Percent_Identity=27.4131274131274, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788682, Length=238, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790281, Length=204, Percent_Identity=26.9607843137255, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17540306, Length=247, Percent_Identity=43.3198380566802, Blast_Score=207, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17554946, Length=265, Percent_Identity=29.811320754717, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25145438, Length=250, Percent_Identity=33.2, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17540714, Length=198, Percent_Identity=32.3232323232323, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17560910, Length=259, Percent_Identity=25.0965250965251, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17536985, Length=288, Percent_Identity=27.0833333333333, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17534483, Length=261, Percent_Identity=27.5862068965517, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17535521, Length=188, Percent_Identity=27.1276595744681, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17549921, Length=211, Percent_Identity=24.6445497630332, Blast_Score=71, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6320241, Length=199, Percent_Identity=25.6281407035176, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI19922422, Length=253, Percent_Identity=39.9209486166008, Blast_Score=213, Evalue=9e-56, Organism=Drosophila melanogaster, GI20129971, Length=248, Percent_Identity=30.241935483871, Blast_Score=130, Evalue=8e-31, Organism=Drosophila melanogaster, GI24653477, Length=248, Percent_Identity=30.241935483871, Blast_Score=130, Evalue=8e-31, Organism=Drosophila melanogaster, GI24653139, Length=258, Percent_Identity=30.2325581395349, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI21357171, Length=273, Percent_Identity=28.9377289377289, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI24650670, Length=259, Percent_Identity=29.7297297297297, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24654903, Length=180, Percent_Identity=28.3333333333333, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI19920382, Length=228, Percent_Identity=28.9473684210526, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI24583165, Length=176, Percent_Identity=26.7045454545455, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28373; Mature: 28242
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAALATAPAATPEAPVLLRSDADGVATLTLNRPQARNALSMALMGALQAQLDAIRADPS CCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCC VRVVILQGAGPAFCAGHDLKEMRADPSREATEAVFRTCARLMLSLTRLPQPVIARVHGIA EEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TAAGCQLVATCDLAVCAETARFATPGVQIGLFCSTPMVALSRAVSRKAALEMLLVGDPID HHHCCEEEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCC AAEALRIGLVNRAVPEADLDAAVSALAARIAGKARRVLAIGKEAFGRQIEMSLEDAYGYT HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEHHHHCCHH AEVMTRNMMMADAQEGIDAFLGKRPPRWEP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TAALATAPAATPEAPVLLRSDADGVATLTLNRPQARNALSMALMGALQAQLDAIRADPS CCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCC VRVVILQGAGPAFCAGHDLKEMRADPSREATEAVFRTCARLMLSLTRLPQPVIARVHGIA EEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TAAGCQLVATCDLAVCAETARFATPGVQIGLFCSTPMVALSRAVSRKAALEMLLVGDPID HHHCCEEEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCC AAEALRIGLVNRAVPEADLDAAVSALAARIAGKARRVLAIGKEAFGRQIEMSLEDAYGYT HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEHHHHCCHH AEVMTRNMMMADAQEGIDAFLGKRPPRWEP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA