| Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
|---|---|
| Accession | NC_010503 |
| Length | 751,679 |
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The map label for this gene is 170762294
Identifier: 170762294
GI number: 170762294
Start: 356393
End: 356968
Strand: Reverse
Name: 170762294
Synonym: UPA3_0327
Alternate gene names: NA
Gene position: 356968-356393 (Counterclockwise)
Preceding gene: 170762382
Following gene: 170762074
Centisome position: 47.49
GC content: 21.18
Gene sequence:
>576_bases ATGAATAGTACATACCAATTGTTTATTGATGTTACATCAAGAAAATGTATTTTAGCAATTTATAAAAACTTTAAAATCCA TACTAGCATTATTGTTGATACAAACAATAATCTTACAGATATTATTGTTGAACACCTTAATAATTTATTAAAAATCACTA ACTTGCAATATCAAGATCTAGAAGCAATATATTTAAATACTGGTCCAGGATCATTTACTGGAATACGTGTTGGTGCTATT GTTGCTAAAACGATTTGTACAATTTTTAATAAAATTAAACTTTTTATTAATGATAGTTTAAATATTATAGCCAATGGTAA GAATGATGTTTTTGTTTATTTAGATGCTAAAGGTAATAAATCGTATGTAATAACTATTACTAATAATATTCAAAACGAAT ATAAAATTATTACTAATAAAGAATTACAAAATGAATTAAAAAATACATCATTAACAATAATTGATGCAAATCAAATTGAC TATCATGATCTCATATATAACTTAAAATTTGATAATTTTAAGTTAACTAATATCTTAGATTTTAGATTAAATTATGTTAA AAAACCTCTTAATTAG
Upstream 100 bases:
>100_bases TTTTATATTAGTTTTAATCATCCATCCACTAATAAAAAAGTAGAATTTAAAATCAATATGCCAAAAGAATTTATGGAATT AATTAGAGAGTTAAAAGCAA
Downstream 100 bases:
>100_bases ACCTGCTGATCAAAAAGATTTGAATGATATTGCTATTTTTGAAAATAGATTTTTCTTAAATGATTGTTATTCGATGAGAA ATTTAGAAGAAATTTTTCAT
Product: glycoprotease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MNSTYQLFIDVTSRKCILAIYKNFKIHTSIIVDTNNNLTDIIVEHLNNLLKITNLQYQDLEAIYLNTGPGSFTGIRVGAI VAKTICTIFNKIKLFINDSLNIIANGKNDVFVYLDAKGNKSYVITITNNIQNEYKIITNKELQNELKNTSLTIIDANQID YHDLIYNLKFDNFKLTNILDFRLNYVKKPLN
Sequences:
>Translated_191_residues MNSTYQLFIDVTSRKCILAIYKNFKIHTSIIVDTNNNLTDIIVEHLNNLLKITNLQYQDLEAIYLNTGPGSFTGIRVGAI VAKTICTIFNKIKLFINDSLNIIANGKNDVFVYLDAKGNKSYVITITNNIQNEYKIITNKELQNELKNTSLTIIDANQID YHDLIYNLKFDNFKLTNILDFRLNYVKKPLN >Mature_191_residues MNSTYQLFIDVTSRKCILAIYKNFKIHTSIIVDTNNNLTDIIVEHLNNLLKITNLQYQDLEAIYLNTGPGSFTGIRVGAI VAKTICTIFNKIKLFINDSLNIIANGKNDVFVYLDAKGNKSYVITITNNIQNEYKIITNKELQNELKNTSLTIIDANQID YHDLIYNLKFDNFKLTNILDFRLNYVKKPLN
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 21946; Mature: 21946
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTYQLFIDVTSRKCILAIYKNFKIHTSIIVDTNNNLTDIIVEHLNNLLKITNLQYQDL CCCEEEEEEEECCCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCE EAIYLNTGPGSFTGIRVGAIVAKTICTIFNKIKLFINDSLNIIANGKNDVFVYLDAKGNK EEEEEECCCCCCCEEEHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCEEEEEECCCCC SYVITITNNIQNEYKIITNKELQNELKNTSLTIIDANQIDYHDLIYNLKFDNFKLTNILD EEEEEEECCCCCEEEEEECHHHHHHHCCCEEEEEECCCCCHHHEEEEEEECCEEEEHHEE FRLNYVKKPLN HHHHHHCCCCC >Mature Secondary Structure MNSTYQLFIDVTSRKCILAIYKNFKIHTSIIVDTNNNLTDIIVEHLNNLLKITNLQYQDL CCCEEEEEEEECCCEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCE EAIYLNTGPGSFTGIRVGAIVAKTICTIFNKIKLFINDSLNIIANGKNDVFVYLDAKGNK EEEEEECCCCCCCEEEHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCEEEEEECCCCC SYVITITNNIQNEYKIITNKELQNELKNTSLTIIDANQIDYHDLIYNLKFDNFKLTNILD EEEEEEECCCCCEEEEEECHHHHHHHCCCEEEEEECCCCCHHHEEEEEEECCEEEEHHEE FRLNYVKKPLN HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]