Click here to switch to the map view.

The map label for this gene is era

Identifier: 170762293

GI number: 170762293

Start: 588882

End: 589784

Strand: Direct

Name: era

Synonym: UPA3_0509

Alternate gene names: 170762293

Gene position: 588882-589784 (Clockwise)

Preceding gene: 170762010

Following gene: 170762120

Centisome position: 78.34

GC content: 25.91

Gene sequence:

>903_bases
ATGATTAAAAAATACGGAATCGTAGCTATTGTTGGAAAACCAAATGTTGGTAAATCAACATTAATCAATGCGATTATGAA
AAAAAAAGTCTCAATCATTTCAAATAAGCCGCAAACAACACGCAATGCTGTTAAAGAGATTTATGAAGATGATGAATCAG
CAATTATTTTTACTGATACGCCTGGTTTTCATGAACCATCAAATAAACTAGATTTATTTTTAAATCATGAAATTGAAATT
TCATATAAAGAAGCAAATGTAATCTTATTCGTGACAACTATGGACAAGGAATTAGATGCCAATGATTTTGAAATTATTAA
TTTAATTAAAGAAGCAAATAAAGAAAATATTATTTTAGTCATTTCAAAAGCTGAAATGGCTAAAAATCAAGATCAAATTG
ATGAAAGAATCCACTTTTTAAAAAAACATATAGCATTTAAGGATGTTGTTCAAATAAGTGCTTTACATGTTATTAACATT
GATAAATTAATTAATACAATCAAAAATTACCTTCACAAAGATGTGGTAACCGATTATTTTCGTCAAAAAGCCGAAAAAGA
AGATAAATTTGTTATTACTGAAATTATTCGTGAACAATGCTTATTAAATTTAAACCATGAAGTTCCTCACGGTGTTGGTG
TAGAAATTGATGAAAGTAAATACAACCAAGAAGCAAATCATTGGATAATTAAAGCTTCAATAATAATTGAAAAAAATTCT
CATAAACCTATTATTATTGGCCAAAATGGTACGATGATTAAAAAAATTAGCATGGGGGCAAGAAAGCAGTTGCATGAAAT
TTATGATTGTCATATTTCATTAACAATTTTTGTTAAAGTTGAAAACAATTGACGTGATAATAATAATATTATTAAATCAT
TAGGGTATAAAATTAAAAAATAA

Upstream 100 bases:

>100_bases
TATGATCATATAAAAATTGAAGATGAAAAAATTATGTTTGCTTTACAAGATGAAATTTTAAATGAATTAAAAATTACAAG
AAATATAAATGGTGCTAGAA

Downstream 100 bases:

>100_bases
TGGCTGAAATAATAACTAGAGGATATTTAGTTGCGCGCCAGGATTATGATGTTTTTGATGAAATATTAACATTTATTAAT
GAATATGGTAATCGTTTTAT

Product: GTP-binding protein Era

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MIKKYGIVAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDDESAIIFTDTPGFHEPSNKLDLFLNHEIEI
SYKEANVILFVTTMDKELDANDFEIINLIKEANKENIILVISKAEMAKNQDQIDERIHFLKKHIAFKDVVQISALHVINI
DKLINTIKNYLHKDVVTDYFRQKAEKEDKFVITEIIREQCLLNLNHEVPHGVGVEIDESKYNQEANHWIIKASIIIEKNS
HKPIIIGQNGTMIKKISMGARKQLHEIYDCHISLTIFVKVENNWRDNNNIIKSLGYKIKK

Sequences:

>Translated_300_residues
MIKKYGIVAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDDESAIIFTDTPGFHEPSNKLDLFLNHEIEI
SYKEANVILFVTTMDKELDANDFEIINLIKEANKENIILVISKAEMAKNQDQIDERIHFLKKHIAFKDVVQISALHVINI
DKLINTIKNYLHKDVVTDYFRQKAEKEDKFVITEIIREQCLLNLNHEVPHGVGVEIDESKYNQEANHWIIKASIIIEKNS
HKPIIIGQNGTMIKKISMGARKQLHEIYDCHISLTIFVKVENN*RDNNNIIKSLGYKIKK
>Mature_300_residues
MIKKYGIVAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDDESAIIFTDTPGFHEPSNKLDLFLNHEIEI
SYKEANVILFVTTMDKELDANDFEIINLIKEANKENIILVISKAEMAKNQDQIDERIHFLKKHIAFKDVVQISALHVINI
DKLINTIKNYLHKDVVTDYFRQKAEKEDKFVITEIIREQCLLNLNHEVPHGVGVEIDESKYNQEANHWIIKASIIIEKNS
HKPIIIGQNGTMIKKISMGARKQLHEIYDCHISLTIFVKVENN*RDNNNIIKSLGYKIKK

Specific function: An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism [H]

COG id: COG1159

COG function: function code R; GTPase

Gene ontology:

Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1788919, Length=294, Percent_Identity=31.2925170068027, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI87082120, Length=166, Percent_Identity=26.5060240963855, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005662
- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004044
- InterPro:   IPR002917
- InterPro:   IPR005225 [H]

Pfam domain/function: PF07650 KH_2; PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 34348; Mature: 34348

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS50823 KH_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKYGIVAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDDESAIIFTDT
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECC
PGFHEPSNKLDLFLNHEIEISYKEANVILFVTTMDKELDANDFEIINLIKEANKENIILV
CCCCCCCCCEEEEEECEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE
ISKAEMAKNQDQIDERIHFLKKHIAFKDVVQISALHVINIDKLINTIKNYLHKDVVTDYF
EECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHH
RQKAEKEDKFVITEIIREQCLLNLNHEVPHGVGVEIDESKYNQEANHWIIKASIIIEKNS
HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECHHHCCCCCCEEEEEEEEEEEECC
HKPIIIGQNGTMIKKISMGARKQLHEIYDCHISLTIFVKVENNRDNNNIIKSLGYKIKK
CCCEEECCCCCEEEEEHHHHHHHHHHHHEEEEEEEEEEEEECCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MIKKYGIVAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDDESAIIFTDT
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECC
PGFHEPSNKLDLFLNHEIEISYKEANVILFVTTMDKELDANDFEIINLIKEANKENIILV
CCCCCCCCCEEEEEECEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEE
ISKAEMAKNQDQIDERIHFLKKHIAFKDVVQISALHVINIDKLINTIKNYLHKDVVTDYF
EECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHH
RQKAEKEDKFVITEIIREQCLLNLNHEVPHGVGVEIDESKYNQEANHWIIKASIIIEKNS
HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECHHHCCCCCCEEEEEEEEEEEECC
HKPIIIGQNGTMIKKISMGARKQLHEIYDCHISLTIFVKVENNRDNNNIIKSLGYKIKK
CCCEEECCCCCEEEEEHHHHHHHHHHHHEEEEEEEEEEEEECCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA