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The map label for this gene is ureF [H]

Identifier: 170762289

GI number: 170762289

Start: 492370

End: 493077

Strand: Reverse

Name: ureF [H]

Synonym: UPA3_0449

Alternate gene names: 170762289

Gene position: 493077-492370 (Counterclockwise)

Preceding gene: 170762103

Following gene: 170762394

Centisome position: 65.6

GC content: 28.81

Gene sequence:

>708_bases
GTGACGCTAAATAGTGACTATTTAAATTTATTAGACCTAATGCAGATCACTAACGCAAACTTTCCAATTGGAACATTTAG
TCATTCTTTTGGAGTTGAAACTTATATTAGAAAAGATATTGTTTTTGATGGAGAATCATTAATTAAAGCGTTACTTCTGT
ATATGAATGAACAATTGTTACATGGTGATTTATTGGCAATTTATCAAATTTTTAAACTATTGCCAAAACAAAAAATAAAT
GCAATTTGAGAAATTGATCAAATGATAAACTTTCAAGGTTTAGCAAGAGAGACTCGTGAAGGTCAACGTCGAATTGGACA
ACAAATGGTAAAGATATATAATGAACTTTTTAATTGTGAACTTTTAGTTGAATATGCTGAAAGAATAAAAAATAAAAAAT
CTTATGGAAATCCTGCTGTTGCGTTTGCTTTATTAGCTATGCATTTAAAAATAGATTTAAAAACTGCTTTATATACGCAT
CTTTACTCTACAGTTGCTGCATTAACGCAAAACTGTGTACGTGCAATTCCATTAGGACAAGTTAAGGGACAAAAAATAAT
TTATCAACTTAAACATGTTTATTTTGATGATATTGTTAATAAAGTCTTTACATTGGATTTTAAAACAGATTTTTGCAAAA
ATATACCAGGCCTTGAAATTGCACAAATGGAACACGAAGACACACCTGTTCGATTATTCATGTCATAA

Upstream 100 bases:

>100_bases
ATCGTTCCCTACGACTATTTAGTAGAAGAATACCTTCAAGATAATAAAGCCCTATATGAAAGAAAAAAAATTAAACTTAA
AGAAGCATTTAAACACTGTA

Downstream 100 bases:

>100_bases
TTAAAGTTTTAGTCAACATTACATTAATCATAAAAATACCATTTAATATTTTTAAAAATTAAAAAAGAAAGAGAATTAAT
TATGAAAAGACCATTAATTA

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTLNSDYLNLLDLMQITNANFPIGTFSHSFGVETYIRKDIVFDGESLIKALLLYMNEQLLHGDLLAIYQIFKLLPKQKIN
AIWEIDQMINFQGLARETREGQRRIGQQMVKIYNELFNCELLVEYAERIKNKKSYGNPAVAFALLAMHLKIDLKTALYTH
LYSTVAALTQNCVRAIPLGQVKGQKIIYQLKHVYFDDIVNKVFTLDFKTDFCKNIPGLEIAQMEHEDTPVRLFMS

Sequences:

>Translated_235_residues
MTLNSDYLNLLDLMQITNANFPIGTFSHSFGVETYIRKDIVFDGESLIKALLLYMNEQLLHGDLLAIYQIFKLLPKQKIN
AI*EIDQMINFQGLARETREGQRRIGQQMVKIYNELFNCELLVEYAERIKNKKSYGNPAVAFALLAMHLKIDLKTALYTH
LYSTVAALTQNCVRAIPLGQVKGQKIIYQLKHVYFDDIVNKVFTLDFKTDFCKNIPGLEIAQMEHEDTPVRLFMS
>Mature_234_residues
TLNSDYLNLLDLMQITNANFPIGTFSHSFGVETYIRKDIVFDGESLIKALLLYMNEQLLHGDLLAIYQIFKLLPKQKINA
I*EIDQMINFQGLARETREGQRRIGQQMVKIYNELFNCELLVEYAERIKNKKSYGNPAVAFALLAMHLKIDLKTALYTHL
YSTVAALTQNCVRAIPLGQVKGQKIIYQLKHVYFDDIVNKVFTLDFKTDFCKNIPGLEIAQMEHEDTPVRLFMS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 26943; Mature: 26812

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNSDYLNLLDLMQITNANFPIGTFSHSFGVETYIRKDIVFDGESLIKALLLYMNEQLL
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HGDLLAIYQIFKLLPKQKINAIEIDQMINFQGLARETREGQRRIGQQMVKIYNELFNCEL
HHHHHHHHHHHHHCCHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVEYAERIKNKKSYGNPAVAFALLAMHLKIDLKTALYTHLYSTVAALTQNCVRAIPLGQV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KGQKIIYQLKHVYFDDIVNKVFTLDFKTDFCKNIPGLEIAQMEHEDTPVRLFMS
CHHHHHHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCEEECCCCCCCCEEEEEC
>Mature Secondary Structure 
TLNSDYLNLLDLMQITNANFPIGTFSHSFGVETYIRKDIVFDGESLIKALLLYMNEQLL
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
HGDLLAIYQIFKLLPKQKINAIEIDQMINFQGLARETREGQRRIGQQMVKIYNELFNCEL
HHHHHHHHHHHHHCCHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVEYAERIKNKKSYGNPAVAFALLAMHLKIDLKTALYTHLYSTVAALTQNCVRAIPLGQV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KGQKIIYQLKHVYFDDIVNKVFTLDFKTDFCKNIPGLEIAQMEHEDTPVRLFMS
CHHHHHHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA