| Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
|---|---|
| Accession | NC_010503 |
| Length | 751,679 |
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The map label for this gene is 170762194
Identifier: 170762194
GI number: 170762194
Start: 460730
End: 462178
Strand: Reverse
Name: 170762194
Synonym: UPA3_0417
Alternate gene names: NA
Gene position: 462178-460730 (Counterclockwise)
Preceding gene: 170762343
Following gene: 170762020
Centisome position: 61.49
GC content: 28.99
Gene sequence:
>1449_bases ATGTTTAAGAAAAATAAAAAATCTTTAGCAGTATTGCTAGTAGGTTTTTCAACTGTTTTAATTTCAAGTATTGCGGTTGC TGCTACAGCATGTGCAAGAAAAGACAATAACGTTAAAGAGGAAGGAAAAACAACACTTAATAAGTTAATTTCAAAAAAAG CTCCAAAACAAAATGCAACTAAATCTAGTGAAAAATATATCTTAAGTGATGTTAATAATAGTAGTACTTTTTTTAATTCA CTAACAGACCCTTATAAATGTTTTGAAATGTTTGCAAAATCATTGGATGATGCAGGTTATGAAATTACATCACATGAACC TTTGAAAAATAGCGGTAAAACAAGTTTTTTAGAGTATGCTAAAGAACTTAATAATAAGATTCGTGAATATGTTAGAAAAG TTGCTAATTTACCAACTATTAAAAAATTAAGAGATAATAATACAACTGTTTTATGAGCAGAATCAACACAAAGTTTTAAT AGTTCAGATGCATCTAAATTAGATTTATACTATTTCCAACAAGAAGATTTATTCCCTTTATTGTATTCTCAACCAGATGA TTCAAATGTTCCTGGGTTTGGTTTACGTTTTCCTAAACCAAAAAACCATAATGCTGATAAATATTTTGATAACTGACATG GAATTGGTGCATCCCAAAATAATGCGTCAAAAAATGACTATGATTGAATGCTATCAATGCAAGAAGCTTTTTATGGAACT GCGGATTATGTTTTCTTTAATTATGACTCAAACAATCTTGAAGGCAATGAAGATGGAGAGATTTTAAAATCAAATTTTGA AAAATTCTTTAAGAAAACTGTTAATAATAACAAAATTATTCCAGTTGATTTTCAATTTGAATATTCTTCAATTTGAGGAC CTATTGGAACAGTACGTTTAGTTCAATCACTTGCTAAAAGATTAGGGGTAAGTGATAGTGAATTAGCAAGTGTTAGTCTT GATTGAACTATGCCATCAAAACAAACATTAAAACACATTCGTCCAAAAAATTCTAATAATGATCATAATAAATTTGCAAT CTGATTCTATAATTTATGAGATCATTGTGTGGCATTGGGAATTCAACCAGACTATGCTTCATTCGTTAAAGAAAAAGGAA AAACATATACTAAACTACCAGGATTTTTAGCTGATTTAGTAGATGAAACAAAAACCGAATTTAAAGATTTCACTGGTGAT GCTCAAAAAGTTGCTGGTATGAATTTATATGCTCTAGGTGGTAATAATTCTCATATTAACCGTTCTTTTAAAACTCTTAT TGGCAATGCAATACCAAAAGCTGTTCCTACTGAACGTGGCGATTCAAATAATTCTCGTTCACCAATTAATTTTGAATTCT ATGATCGTACAACAAACACATTACAATCTGTTGAAGGAACAAAAGTTGTAAGTTGAACAGATCCAGCAAAAGAAAATAAA CAAAAATAA
Upstream 100 bases:
>100_bases TTTTGGTATATAAATCATAGAATATTTTCTTTTTACTATTAGAATGAAATTGTTTGTCAAAACAAAACAATATTATTTTA AAAATGAGGATAATAAAAAT
Downstream 100 bases:
>100_bases TTAAGTTTTTATGTTTAAGAATAAATCATTAAAATTTAAAAATAAATTAGATTGAAAAACACATTTTAGAAGACTTATAA CATCTTTATTAATTATTTTA
Product: putative ABC substrate-binding protein - iron
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MFKKNKKSLAVLLVGFSTVLISSIAVAATACARKDNNVKEEGKTTLNKLISKKAPKQNATKSSEKYILSDVNNSSTFFNS LTDPYKCFEMFAKSLDDAGYEITSHEPLKNSGKTSFLEYAKELNNKIREYVRKVANLPTIKKLRDNNTTVLWAESTQSFN SSDASKLDLYYFQQEDLFPLLYSQPDDSNVPGFGLRFPKPKNHNADKYFDNWHGIGASQNNASKNDYDWMLSMQEAFYGT ADYVFFNYDSNNLEGNEDGEILKSNFEKFFKKTVNNNKIIPVDFQFEYSSIWGPIGTVRLVQSLAKRLGVSDSELASVSL DWTMPSKQTLKHIRPKNSNNDHNKFAIWFYNLWDHCVALGIQPDYASFVKEKGKTYTKLPGFLADLVDETKTEFKDFTGD AQKVAGMNLYALGGNNSHINRSFKTLIGNAIPKAVPTERGDSNNSRSPINFEFYDRTTNTLQSVEGTKVVSWTDPAKENK QK
Sequences:
>Translated_482_residues MFKKNKKSLAVLLVGFSTVLISSIAVAATACARKDNNVKEEGKTTLNKLISKKAPKQNATKSSEKYILSDVNNSSTFFNS LTDPYKCFEMFAKSLDDAGYEITSHEPLKNSGKTSFLEYAKELNNKIREYVRKVANLPTIKKLRDNNTTVL*AESTQSFN SSDASKLDLYYFQQEDLFPLLYSQPDDSNVPGFGLRFPKPKNHNADKYFDN*HGIGASQNNASKNDYD*MLSMQEAFYGT ADYVFFNYDSNNLEGNEDGEILKSNFEKFFKKTVNNNKIIPVDFQFEYSSI*GPIGTVRLVQSLAKRLGVSDSELASVSL D*TMPSKQTLKHIRPKNSNNDHNKFAI*FYNL*DHCVALGIQPDYASFVKEKGKTYTKLPGFLADLVDETKTEFKDFTGD AQKVAGMNLYALGGNNSHINRSFKTLIGNAIPKAVPTERGDSNNSRSPINFEFYDRTTNTLQSVEGTKVVS*TDPAKENK QK >Mature_482_residues MFKKNKKSLAVLLVGFSTVLISSIAVAATACARKDNNVKEEGKTTLNKLISKKAPKQNATKSSEKYILSDVNNSSTFFNS LTDPYKCFEMFAKSLDDAGYEITSHEPLKNSGKTSFLEYAKELNNKIREYVRKVANLPTIKKLRDNNTTVL*AESTQSFN SSDASKLDLYYFQQEDLFPLLYSQPDDSNVPGFGLRFPKPKNHNADKYFDN*HGIGASQNNASKNDYD*MLSMQEAFYGT ADYVFFNYDSNNLEGNEDGEILKSNFEKFFKKTVNNNKIIPVDFQFEYSSI*GPIGTVRLVQSLAKRLGVSDSELASVSL D*TMPSKQTLKHIRPKNSNNDHNKFAI*FYNL*DHCVALGIQPDYASFVKEKGKTYTKLPGFLADLVDETKTEFKDFTGD AQKVAGMNLYALGGNNSHINRSFKTLIGNAIPKAVPTERGDSNNSRSPINFEFYDRTTNTLQSVEGTKVVS*TDPAKENK QK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52891; Mature: 52891
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKNKKSLAVLLVGFSTVLISSIAVAATACARKDNNVKEEGKTTLNKLISKKAPKQNAT CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC KSSEKYILSDVNNSSTFFNSLTDPYKCFEMFAKSLDDAGYEITSHEPLKNSGKTSFLEYA CCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHH KELNNKIREYVRKVANLPTIKKLRDNNTTVLAESTQSFNSSDASKLDLYYFQQEDLFPLL HHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCHHE YSQPDDSNVPGFGLRFPKPKNHNADKYFDNHGIGASQNNASKNDYDMLSMQEAFYGTADY ECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE VFFNYDSNNLEGNEDGEILKSNFEKFFKKTVNNNKIIPVDFQFEYSSIGPIGTVRLVQSL EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHH AKRLGVSDSELASVSLDTMPSKQTLKHIRPKNSNNDHNKFAIFYNLDHCVALGIQPDYAS HHHHCCCCHHHHEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCEEEEECCCCHHHH FVKEKGKTYTKLPGFLADLVDETKTEFKDFTGDAQKVAGMNLYALGGNNSHINRSFKTLI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCHHHHHHHHHH GNAIPKAVPTERGDSNNSRSPINFEFYDRTTNTLQSVEGTKVVSTDPAKENKQK HHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCEEEECCCCCCCCCC >Mature Secondary Structure MFKKNKKSLAVLLVGFSTVLISSIAVAATACARKDNNVKEEGKTTLNKLISKKAPKQNAT CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC KSSEKYILSDVNNSSTFFNSLTDPYKCFEMFAKSLDDAGYEITSHEPLKNSGKTSFLEYA CCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHH KELNNKIREYVRKVANLPTIKKLRDNNTTVLAESTQSFNSSDASKLDLYYFQQEDLFPLL HHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCHHE YSQPDDSNVPGFGLRFPKPKNHNADKYFDNHGIGASQNNASKNDYDMLSMQEAFYGTADY ECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE VFFNYDSNNLEGNEDGEILKSNFEKFFKKTVNNNKIIPVDFQFEYSSIGPIGTVRLVQSL EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHH AKRLGVSDSELASVSLDTMPSKQTLKHIRPKNSNNDHNKFAIFYNLDHCVALGIQPDYAS HHHHCCCCHHHHEEECCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCEEEEECCCCHHHH FVKEKGKTYTKLPGFLADLVDETKTEFKDFTGDAQKVAGMNLYALGGNNSHINRSFKTLI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCHHHHHHHHHH GNAIPKAVPTERGDSNNSRSPINFEFYDRTTNTLQSVEGTKVVSTDPAKENKQK HHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA