| Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
|---|---|
| Accession | NC_010503 |
| Length | 751,679 |
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The map label for this gene is 170762046
Identifier: 170762046
GI number: 170762046
Start: 503050
End: 504249
Strand: Reverse
Name: 170762046
Synonym: UPA3_0462
Alternate gene names: NA
Gene position: 504249-503050 (Counterclockwise)
Preceding gene: 170761959
Following gene: 170762266
Centisome position: 67.08
GC content: 22.75
Gene sequence:
>1200_bases ATGGTTTTAGGATCGTTTAGTTTGTTAGCAAAAAATAAAAGTCAACAAACAATTAGTTCGAAACTAAACCAACAAGTTAA TTTGGTTGACAATCAAAATCAAAACAAAATTAGTTATAGTGTTATTGAAATTGATGAAAGCAATAAAGATTATTTTAAAG ATAAATTAATTATTCGTTTGATTTTTAATACAACAAAAGCTTCAAAAACAGAAATTTTTGAGCAACATTTAAAAATTAAA ACTTGAATTAAAAATGCAAAAATATCAGGTGTAGATCAATATAATGAATTTGATTATTTACCTTTTATGGATTTAATTAT TTTTAATAATAAATTGGACTTAAAACAACTTGAATCATTATCAAATAGTGATTTTATTAATCAAGTAATTATTAATAAAA TTAAATTTATTTTATTTAATAAAAAGATTGATCAAAAACCAATGGCTGTATTTGGTGAGTGTAAAAATTTAGTTTTAAAA AATGAATGAGGATTTGATCAAGATGTTGGAGAATTTTGTCAAATCGATTCAAGTAGTGGAACAAGTTTTGAACCAGTTTA TTCAAAAGATTTGCTTGAATTAAGAGAAGAATTTATTGAAAATGTAGAAGATCGTTTAAGTGATGAGTTTTTTGCAGATT TTTATGATAATACTAATTTATTTGAACAAACTCCAACGCCCAATGATCATTTATTAATTAAAACCAATCCTATAAAAGAT GATTTTGAAAGTTTGTTATCAAAAAAATCTGGATTACAGTATAAAATAATGCGATTAGTGTATCAACATGAACATGGTAA AGTAATTAAAACATTACCTGTTAATGCCCTAACATTCTTAAATCATGAAGATTTAAAATTTGAAGAATTGTATTCAGGGA ATTATCGATTTACTGGTATTGAGTATTGAGATAAAGAAAATAAAATTTGAGTTTTTGAGGAATTAATCAATCATAATGAA CAATATTATCAAATGCAAGTAGTTTTTAATAACAACATTACTGTTCATGATTTAATTTCAAAAGTTTATTTTGATGCTCA TTTTAATAAACCACAAGAAGAAAGTACTTCACAAAGTTTAACTTTATCATTAAATCCTAATTTTAATAATATAAATAAAG ATGAATCAATTGAAATAAAGTTAATGAATTTAAATGATCGTGAAAATTGAGAAAGTCCATCTTTATTCACTAGATATTAA
Upstream 100 bases:
>100_bases TTTTTTAACACCTATTTTAAAAATTTAATAATTTTAAGGATAAAATAATATGAAATTTAAAAAGAAAGCAATATTATTGT CGACAATAAGTTTAAGTTCG
Downstream 100 bases:
>100_bases TGCAAAGGATGAAACATCAGAAAATAGTCATATTAAAATTTGAAAAGAGTTAGATTGATTAATACAAAATGACGTAAAAA TTATTAACCATAGTTATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MVLGSFSLLAKNKSQQTISSKLNQQVNLVDNQNQNKISYSVIEIDESNKDYFKDKLIIRLIFNTTKASKTEIFEQHLKIK TWIKNAKISGVDQYNEFDYLPFMDLIIFNNKLDLKQLESLSNSDFINQVIINKIKFILFNKKIDQKPMAVFGECKNLVLK NEWGFDQDVGEFCQIDSSSGTSFEPVYSKDLLELREEFIENVEDRLSDEFFADFYDNTNLFEQTPTPNDHLLIKTNPIKD DFESLLSKKSGLQYKIMRLVYQHEHGKVIKTLPVNALTFLNHEDLKFEELYSGNYRFTGIEYWDKENKIWVFEELINHNE QYYQMQVVFNNNITVHDLISKVYFDAHFNKPQEESTSQSLTLSLNPNFNNINKDESIEIKLMNLNDRENWESPSLFTRY
Sequences:
>Translated_399_residues MVLGSFSLLAKNKSQQTISSKLNQQVNLVDNQNQNKISYSVIEIDESNKDYFKDKLIIRLIFNTTKASKTEIFEQHLKIK T*IKNAKISGVDQYNEFDYLPFMDLIIFNNKLDLKQLESLSNSDFINQVIINKIKFILFNKKIDQKPMAVFGECKNLVLK NE*GFDQDVGEFCQIDSSSGTSFEPVYSKDLLELREEFIENVEDRLSDEFFADFYDNTNLFEQTPTPNDHLLIKTNPIKD DFESLLSKKSGLQYKIMRLVYQHEHGKVIKTLPVNALTFLNHEDLKFEELYSGNYRFTGIEY*DKENKI*VFEELINHNE QYYQMQVVFNNNITVHDLISKVYFDAHFNKPQEESTSQSLTLSLNPNFNNINKDESIEIKLMNLNDREN*ESPSLFTRY >Mature_399_residues MVLGSFSLLAKNKSQQTISSKLNQQVNLVDNQNQNKISYSVIEIDESNKDYFKDKLIIRLIFNTTKASKTEIFEQHLKIK T*IKNAKISGVDQYNEFDYLPFMDLIIFNNKLDLKQLESLSNSDFINQVIINKIKFILFNKKIDQKPMAVFGECKNLVLK NE*GFDQDVGEFCQIDSSSGTSFEPVYSKDLLELREEFIENVEDRLSDEFFADFYDNTNLFEQTPTPNDHLLIKTNPIKD DFESLLSKKSGLQYKIMRLVYQHEHGKVIKTLPVNALTFLNHEDLKFEELYSGNYRFTGIEY*DKENKI*VFEELINHNE QYYQMQVVFNNNITVHDLISKVYFDAHFNKPQEESTSQSLTLSLNPNFNNINKDESIEIKLMNLNDREN*ESPSLFTRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46022; Mature: 46022
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLGSFSLLAKNKSQQTISSKLNQQVNLVDNQNQNKISYSVIEIDESNKDYFKDKLIIRL CEEECCHHHHCCCHHHHHHHHHCCEEEEECCCCCCEEEEEEEEEECCCCHHHHHHEEEEE IFNTTKASKTEIFEQHLKIKTIKNAKISGVDQYNEFDYLPFMDLIIFNNKLDLKQLESLS EECCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCC NSDFINQVIINKIKFILFNKKIDQKPMAVFGECKNLVLKNEGFDQDVGEFCQIDSSSGTS CCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHCCCCCCCCC FEPVYSKDLLELREEFIENVEDRLSDEFFADFYDNTNLFEQTPTPNDHLLIKTNPIKDDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEECCCHHHH ESLLSKKSGLQYKIMRLVYQHEHGKVIKTLPVNALTFLNHEDLKFEELYSGNYRFTGIEY HHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCHHHHHCCCEEEEEEEE DKENKIVFEELINHNEQYYQMQVVFNNNITVHDLISKVYFDAHFNKPQEESTSQSLTLSL CCCCCCHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE NPNFNNINKDESIEIKLMNLNDRENESPSLFTRY CCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECC >Mature Secondary Structure MVLGSFSLLAKNKSQQTISSKLNQQVNLVDNQNQNKISYSVIEIDESNKDYFKDKLIIRL CEEECCHHHHCCCHHHHHHHHHCCEEEEECCCCCCEEEEEEEEEECCCCHHHHHHEEEEE IFNTTKASKTEIFEQHLKIKTIKNAKISGVDQYNEFDYLPFMDLIIFNNKLDLKQLESLS EECCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCC NSDFINQVIINKIKFILFNKKIDQKPMAVFGECKNLVLKNEGFDQDVGEFCQIDSSSGTS CCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHCCCCCCCCC FEPVYSKDLLELREEFIENVEDRLSDEFFADFYDNTNLFEQTPTPNDHLLIKTNPIKDDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEEECCCHHHH ESLLSKKSGLQYKIMRLVYQHEHGKVIKTLPVNALTFLNHEDLKFEELYSGNYRFTGIEY HHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCHHHHHCCCEEEEEEEE DKENKIVFEELINHNEQYYQMQVVFNNNITVHDLISKVYFDAHFNKPQEESTSQSLTLSL CCCCCCHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE NPNFNNINKDESIEIKLMNLNDRENESPSLFTRY CCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA