| Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
|---|---|
| Accession | NC_010503 |
| Length | 751,679 |
Click here to switch to the map view.
The map label for this gene is asnA
Identifier: 170762014
GI number: 170762014
Start: 413201
End: 414190
Strand: Reverse
Name: asnA
Synonym: UPA3_0379
Alternate gene names: 170762014
Gene position: 414190-413201 (Counterclockwise)
Preceding gene: 170762434
Following gene: 170761978
Centisome position: 55.1
GC content: 25.35
Gene sequence:
>990_bases GTGGATCAATTACAAAAAGCTAAAATTAATCAAACACAAAAAGCAATTGTAGAGATTAAAAATTCTTTTCAAAAACATTT TGCAAAAAATTTAAATCTTTCACGTGTAACAGCACCATTATTTGTTGAAGGACAATCAGGTCTAAATGATCATTTAGACC ATAAACAAAAAGCAGTAAGTTTTTATGCTAAAAAATTAGATAAAACACTTGAAATTGTTCAATCACTAGCAAAATGAAAA CGTTTAGCTTTATTAGATTATGGTTTTAGTTTATATGAAGGTTTGTATACTGATATGAATGCAATTCGTGCAGATGATGA CATCGATGAAATTCATAGCATTTATGTTGATCAGTGAGATTGAGAAATTTTAATTAATAACCAAGATTGTAACTTAGATT TTTTAAAATCAATCGTTAATAAAATTTATTCAACAATTAGAATTGTTCAATTAGAAATTGATCAATTATATAATCCAAAA CAAATTATTTTACCAGATAGTATTACTTTTATTAGTTCACAAGAATTAGAAGATTTATATCCACATTTATCACCATCTCG ACGTGAATATGAGTTTGCAAAAATTCATAAAGCAATTTTTATATACCAAATTGGATATCCACTAAAATCAGGTTATATTC AATCAATACGTTCTCCAGAATATGATAATTGAAATTTAAATGGAGATTTAATTGTTTATCATAAATTAAATGATCAAGCC ATTGAATTATCATCAATGGGAATTCGTGTTAGCAAACAAGATTTTATTAAGCAAACAAATTTTGCTAATTTAAAAAATGA TCAAGAAAATAATTTTTATCATCAAATGATTTTAAATAATCAACTACCCCAAACAATTGGTGGGGGAATCGGTCAAAGTC GTTTATGTATGTTTTTATTAAACAAAAAACACATTGGTGAGGTACAAGTTTCAGTTTGACCAAATGAATATAAAGATGAA TTGTTAAAAAAAGGGATTAAATTACTATAA
Upstream 100 bases:
>100_bases AACGTTTATTTATTTAATATTCCTTTATTTTTTGCAACATCATTATCTGTAATCAGTGGTATTATTTACTACATTAATTT TTACAAAGGAGTTAAAAAAC
Downstream 100 bases:
>100_bases TTTAATTTAAATAATAAAGGAGGTTTTTAATTTGAACTATAAAACATTAATTAATGGAGCATTTGTTGATGCTAAAGAAA AACTACCAGTTTATAATCCA
Product: asparagine synthetase AsnA
Products: NA
Alternate protein names: Asparagine synthetase A [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MDQLQKAKINQTQKAIVEIKNSFQKHFAKNLNLSRVTAPLFVEGQSGLNDHLDHKQKAVSFYAKKLDKTLEIVQSLAKWK RLALLDYGFSLYEGLYTDMNAIRADDDIDEIHSIYVDQWDWEILINNQDCNLDFLKSIVNKIYSTIRIVQLEIDQLYNPK QIILPDSITFISSQELEDLYPHLSPSRREYEFAKIHKAIFIYQIGYPLKSGYIQSIRSPEYDNWNLNGDLIVYHKLNDQA IELSSMGIRVSKQDFIKQTNFANLKNDQENNFYHQMILNNQLPQTIGGGIGQSRLCMFLLNKKHIGEVQVSVWPNEYKDE LLKKGIKLL
Sequences:
>Translated_329_residues MDQLQKAKINQTQKAIVEIKNSFQKHFAKNLNLSRVTAPLFVEGQSGLNDHLDHKQKAVSFYAKKLDKTLEIVQSLAK*K RLALLDYGFSLYEGLYTDMNAIRADDDIDEIHSIYVDQ*D*EILINNQDCNLDFLKSIVNKIYSTIRIVQLEIDQLYNPK QIILPDSITFISSQELEDLYPHLSPSRREYEFAKIHKAIFIYQIGYPLKSGYIQSIRSPEYDN*NLNGDLIVYHKLNDQA IELSSMGIRVSKQDFIKQTNFANLKNDQENNFYHQMILNNQLPQTIGGGIGQSRLCMFLLNKKHIGEVQVSV*PNEYKDE LLKKGIKLL >Mature_329_residues MDQLQKAKINQTQKAIVEIKNSFQKHFAKNLNLSRVTAPLFVEGQSGLNDHLDHKQKAVSFYAKKLDKTLEIVQSLAK*K RLALLDYGFSLYEGLYTDMNAIRADDDIDEIHSIYVDQ*D*EILINNQDCNLDFLKSIVNKIYSTIRIVQLEIDQLYNPK QIILPDSITFISSQELEDLYPHLSPSRREYEFAKIHKAIFIYQIGYPLKSGYIQSIRSPEYDN*NLNGDLIVYHKLNDQA IELSSMGIRVSKQDFIKQTNFANLKNDQENNFYHQMILNNQLPQTIGGGIGQSRLCMFLLNKKHIGEVQVSV*PNEYKDE LLKKGIKLL
Specific function: Asparagine biosynthesis. [C]
COG id: COG2502
COG function: function code E; Asparagine synthetase A
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. AsnA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790183, Length=311, Percent_Identity=38.9067524115756, Blast_Score=196, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006195 - InterPro: IPR004618 [H]
Pfam domain/function: PF03590 AsnA [H]
EC number: =6.3.1.1 [H]
Molecular weight: Translated: 37284; Mature: 37284
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQLQKAKINQTQKAIVEIKNSFQKHFAKNLNLSRVTAPLFVEGQSGLNDHLDHKQKAVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCHHHHHHHHHHH FYAKKLDKTLEIVQSLAKKRLALLDYGFSLYEGLYTDMNAIRADDDIDEIHSIYVDQDEI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCEE LINNQDCNLDFLKSIVNKIYSTIRIVQLEIDQLYNPKQIILPDSITFISSQELEDLYPHL EECCCCCCHHHHHHHHHHHHHHHHHEEEEHHHCCCCCEEECCCCEEECCHHHHHHHCCCC SPSRREYEFAKIHKAIFIYQIGYPLKSGYIQSIRSPEYDNNLNGDLIVYHKLNDQAIELS CCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEHH SMGIRVSKQDFIKQTNFANLKNDQENNFYHQMILNNQLPQTIGGGIGQSRLCMFLLNKKH HCCCEECHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCHHHHHHHHHCCCC IGEVQVSVPNEYKDELLKKGIKLL CCEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure MDQLQKAKINQTQKAIVEIKNSFQKHFAKNLNLSRVTAPLFVEGQSGLNDHLDHKQKAVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCHHHHHHHHHHH FYAKKLDKTLEIVQSLAKKRLALLDYGFSLYEGLYTDMNAIRADDDIDEIHSIYVDQDEI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCEE LINNQDCNLDFLKSIVNKIYSTIRIVQLEIDQLYNPKQIILPDSITFISSQELEDLYPHL EECCCCCCHHHHHHHHHHHHHHHHHEEEEHHHCCCCCEEECCCCEEECCHHHHHHHCCCC SPSRREYEFAKIHKAIFIYQIGYPLKSGYIQSIRSPEYDNNLNGDLIVYHKLNDQAIELS CCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEHH SMGIRVSKQDFIKQTNFANLKNDQENNFYHQMILNNQLPQTIGGGIGQSRLCMFLLNKKH HCCCEECHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCHHHHHHHHHCCCC IGEVQVSVPNEYKDELLKKGIKLL CCEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA