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The map label for this gene is fliP [H]

Identifier: 170684182

GI number: 170684182

Start: 259451

End: 260203

Strand: Reverse

Name: fliP [H]

Synonym: EcSMS35_0245

Alternate gene names: 170684182

Gene position: 260203-259451 (Counterclockwise)

Preceding gene: 170679793

Following gene: 170683515

Centisome position: 5.13

GC content: 56.57

Gene sequence:

>753_bases
ATGAAACGCCGCACTCAACTGGCGCTGGGCCTTGGGCTGCTGGCGCTTGCGCCGCTGGCGTTGGCCCAGGGTGGCGATAT
TGCGCTACTTAACGTGGTGACCCACGGCAACACTCAGGAGTACAGCGTCAAAATTCAGGTACTGATTCTGATGACCCTCG
TCGGTTTGCTGCCGACGATGGTGCTGATGATGACCTGCTTTACGCGCTTTATTATCGTGCTGTCGCTGCTGCGCCAGGCG
CTGGGGCTGCAACAAACGCCGCCAAACCGCATTCTGATTGGTATTGCGCTCTCACTCACTATGCTGGTGATGCGCCCTGT
CTGGCTCAATATTTACGACCACGCGGTAGTGCCGTTTGAAAACGATCAGATTACCCTGACCGATGCGTTAAGCACCGCCG
CGACGCCGCTAAAACGCTTTATGCTGGCGCAGACCGACAAAAAAGCGATGGCGCAAATCATGACCATCGGCGGCGCGAAG
GGCAATGCCGCCGACCAGGATCTCACGATTGTGGTGCCCGCCTATGTGTTGAGCGAGCTGAAAACCGCTTTCCAGATTGG
CTTTATGATTTACATCCCGTTTCTGGTTATCGACCTGATTGTCGCAAGCGTACTGATGGCGATGGGGATGATGATGCTGT
CGCCGCTGATTGTTTCGCTGCCCTTTAAACTGATGCTGTTTGTGCTGATCGACGGCTGGTCGCTGACCATCGGCACGCTC
ACCACCAGCATTCGCGGGCTGGGGCTGGGCTGA

Upstream 100 bases:

>100_bases
ACAATATCCTGCTGGGCAAAGCGGAAGTGGTGGTGGTCAACGAGAAGTACGGCCTGCGCGTGCTGGAGTTTAACACCCGC
GATATCAACGACCTGGCACC

Downstream 100 bases:

>100_bases
TTATGTTGACCGTAGACGTAGCCGCCGACATTGTCGCCAGTGGCATAAAAGTGGTGATTTTGCTGGTTTCGGTGCTGGTG
GTGCCAAGCCTGCTGGTCGG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKRRTQLALGLGLLALAPLALAQGGDIALLNVVTHGNTQEYSVKIQVLILMTLVGLLPTMVLMMTCFTRFIIVLSLLRQA
LGLQQTPPNRILIGIALSLTMLVMRPVWLNIYDHAVVPFENDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIGGAK
GNAADQDLTIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLIDGWSLTIGTL
TTSIRGLGLG

Sequences:

>Translated_250_residues
MKRRTQLALGLGLLALAPLALAQGGDIALLNVVTHGNTQEYSVKIQVLILMTLVGLLPTMVLMMTCFTRFIIVLSLLRQA
LGLQQTPPNRILIGIALSLTMLVMRPVWLNIYDHAVVPFENDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIGGAK
GNAADQDLTIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLIDGWSLTIGTL
TTSIRGLGLG
>Mature_250_residues
MKRRTQLALGLGLLALAPLALAQGGDIALLNVVTHGNTQEYSVKIQVLILMTLVGLLPTMVLMMTCFTRFIIVLSLLRQA
LGLQQTPPNRILIGIALSLTMLVMRPVWLNIYDHAVVPFENDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIGGAK
GNAADQDLTIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLIDGWSLTIGTL
TTSIRGLGLG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=231, Percent_Identity=49.3506493506493, Blast_Score=209, Evalue=1e-55,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27128; Mature: 27128

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRTQLALGLGLLALAPLALAQGGDIALLNVVTHGNTQEYSVKIQVLILMTLVGLLPTM
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEHEEHHHHHHHHHHHHHHHHH
VLMMTCFTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPVWLNIYDHAVVPFE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEECC
NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIGGAKGNAADQDLTIVVPAYVLSEL
CCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
KTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLIDGWSLTIGTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHH
TTSIRGLGLG
HHHHHCCCCC
>Mature Secondary Structure
MKRRTQLALGLGLLALAPLALAQGGDIALLNVVTHGNTQEYSVKIQVLILMTLVGLLPTM
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEHEEHHHHHHHHHHHHHHHHH
VLMMTCFTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPVWLNIYDHAVVPFE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEECC
NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIGGAKGNAADQDLTIVVPAYVLSEL
CCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
KTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLIDGWSLTIGTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHH
TTSIRGLGLG
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]