| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is dipZ [H]
Identifier: 170683820
GI number: 170683820
Start: 4708312
End: 4710009
Strand: Reverse
Name: dipZ [H]
Synonym: EcSMS35_4605
Alternate gene names: 170683820
Gene position: 4710009-4708312 (Counterclockwise)
Preceding gene: 170683216
Following gene: 170679619
Centisome position: 92.93
GC content: 54.06
Gene sequence:
>1698_bases ATGGCTCAACGCATCTTTACGCTGATCCTGCTACTTTGCAGCACTTCCGTTTTTGCCGGATTATTCGACGCGCCGGGACG TTCACAATTTGTCCCCGCGGATCAAGCCTTTGCTTTTGATTTTCAGCAAAAGCAACATGACCTTAATCTGACCTGGCAGA TCAAAGACGGTTACTACCTCTACCGTAAACAGATCCGCATTACGCCGGAACACGCGAAAATTGCCGACGTGCAGCTGCCA CAAGGCGTCTGGCATGAAGATGAGTTTTACGGCAAAAGCGAGATTTACCGCGATCGGCTGACGCTTCCCGTAACCATCAA CCAGGCGAGTGCGGGAGCGACGTTAACTGTCACCTACCAGGGCTGTGCTGATGCCGGTTTCTGTTATCCGCCAGAAACCA AAACCGTTCCGTTAAGCGAAGTGGTCGCCAACAACGCAGCGTCACAGCCTGTGTCTGTTCCGCAGCAAGAGCAGCACACC GCGCAATTGCCCTTTTCCGCGCTCTGGGCGTTGTTGATCGGTATTGGTATCGCCTTTACGCCATGCGTGCTGCCAATGTA CCCTCTGATTTCTGGTATCGTGCTGGGCGGTAAACAGCGGCTCTCCACTGCCAGAGCATTGTTGCTGACCTTTATTTATG TGCAGGGGATGGCACTGACTTACACGGCGCTGGGTCTGGTAGTTGCCGCCGCAGGGTTACAGTTCCAGGCGGCGCTACAG CACCCATACGTGCTCATTGGCCTCGCTATCGTCTTTACCTTGCTGGCGATGTCAATGTTTGGCTTGTTTACCCTGCAACT CCCCTCTTCGCTGCAAACGCGCCTCACGCTGATGAGCAATCGCCAACAGGGCGGCTCACCTGGCGGTGTGTTTGTTATGG GAGCGATTGCCGGACTGATCTGTTCACCATGCACCACCGCACCGCTTAGCGCGATTCTGTTGTATATCGCCCAAAGCGGG AACATGTGGCTGGGGGGCGGCACGCTTTATCTCTATGCGTTGGGCATGGGCCTGCCGCTGATGCTAATAACCGTCTTTGG TAACCGCCTGCTGCCGAAAAGCGGCCCGTGGATGGAACAAGTCAAAACCGCGTTTGGTTTTGTGATCCTCGCACTGCCGG TCTTCCTGCTGGAGCGAGTGATTGGTGATATATGGGGATTACGCTTGTGGTCGGCGCTTGGTGTCGCATTCTTTGGCTGG GCCTTTATCACCAGCCTACAGGCCAAACGCGGCTGGATGCGCGTGGTGCAAATAATCCTGCTGGCAGCGGCATTGGTTAG CGTGCGCCCACTTCAGGATTGGGCATTTGGTGCGACGCATACCGTGCAAACTCAGACGCATCTCAACTTTACACAAATCA AAACGGTAGATGAGTTAAATCAGGCGCTCGTTGAAGCCAAAGGCAAACCAGTGATGTTAGATCTCTATGCCGACTGGTGC GTCGCCTGTAAAGAGTTTGAGAAATACACCTTCAGCGACCCGCAGGTGCAAAAAGCGTTAGCAGACACGGTCTTACTTCA GGCTAACGTCACTGCCAACGACGCCCAAGATGTGGCGCTGTTAAAGCATCTTAATGTCCTTGGCCTACCGACAATTCTCT TTTTTGACGGACAAGGCCAGGAGCATCCACAAGAACGCGTCACGGGCTTTATGGATGCTGAAACCTTCAGCGCACATTTG CGCGATCGCCAACCGTGA
Upstream 100 bases:
>100_bases ACCAGCAGGCACTGCTGGAATGCCTGAAGTCTCATCATCCATATCAAACCCCGGAACTTCTGGTTTTACCTGTTACACAC GGAGACACAGATTACCTCTC
Downstream 100 bases:
>100_bases ACGACACTTGCAGTGGGAAAGACGGAGGAAAATAGCGTGCAACGTGAAGATGTACTGGGAGAAGCCCTGAAATTATTAGA ATTACAAGGGATTGCCAACA
Product: thiol:disulfide interchange protein precursor
Products: NA
Alternate protein names: Protein-disulfide reductase; Disulfide reductase [H]
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFAFDFQQKQHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLP QGVWHEDEFYGKSEIYRDRLTLPVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAASQPVSVPQQEQHT AQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMALTYTALGLVVAAAGLQFQAALQ HPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSG NMWLGGGTLYLYALGMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDIWGLRLWSALGVAFFGW AFITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTVQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWC VACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQERVTGFMDAETFSAHL RDRQP
Sequences:
>Translated_565_residues MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFAFDFQQKQHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLP QGVWHEDEFYGKSEIYRDRLTLPVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAASQPVSVPQQEQHT AQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMALTYTALGLVVAAAGLQFQAALQ HPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSG NMWLGGGTLYLYALGMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDIWGLRLWSALGVAFFGW AFITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTVQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWC VACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQERVTGFMDAETFSAHL RDRQP >Mature_564_residues AQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFAFDFQQKQHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQ GVWHEDEFYGKSEIYRDRLTLPVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAASQPVSVPQQEQHTA QLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMALTYTALGLVVAAAGLQFQAALQH PYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSGN MWLGGGTLYLYALGMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDIWGLRLWSALGVAFFGWA FITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTVQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCV ACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQERVTGFMDAETFSAHLR DRQP
Specific function: Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm, thereby maintaining the
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790578, Length=565, Percent_Identity=98.7610619469027, Blast_Score=1136, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003834 - InterPro: IPR022910 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF02683 DsbD; PF00085 Thioredoxin [H]
EC number: =1.8.1.8 [H]
Molecular weight: Translated: 61926; Mature: 61795
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFAFDFQQKQHDLNLTWQIKDGYYL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECHHHHCCCCCEEEEECCCEEE YRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTLPVTINQASAGATLTVTYQ EEEEEEECCCCCEEEEEECCCCCCCCHHCCCHHHHHHCCEEEEEEEECCCCCCEEEEEEC GCADAGFCYPPETKTVPLSEVVANNAASQPVSVPQQEQHTAQLPFSALWALLIGIGIAFT CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH PCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMALTYTALGLVVAAAGLQFQAALQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC HPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLI CCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH CSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYALGMGLPLMLITVFGNRLLPKSGPWMEQ CCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHH VKTAFGFVILALPVFLLERVIGDIWGLRLWSALGVAFFGWAFITSLQAKRGWMRVVQIIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAALVSVRPLQDWAFGATHTVQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWC HHHHHHHCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH VACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQ HHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCHHCCCEEEEECCCCC EHPQERVTGFMDAETFSAHLRDRQP CCCHHHHHHHHCHHHHHHHHCCCCC >Mature Secondary Structure AQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFAFDFQQKQHDLNLTWQIKDGYYL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECHHHHCCCCCEEEEECCCEEE YRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTLPVTINQASAGATLTVTYQ EEEEEEECCCCCEEEEEECCCCCCCCHHCCCHHHHHHCCEEEEEEEECCCCCCEEEEEEC GCADAGFCYPPETKTVPLSEVVANNAASQPVSVPQQEQHTAQLPFSALWALLIGIGIAFT CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH PCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMALTYTALGLVVAAAGLQFQAALQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC HPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLI CCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH CSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYALGMGLPLMLITVFGNRLLPKSGPWMEQ CCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHH VKTAFGFVILALPVFLLERVIGDIWGLRLWSALGVAFFGWAFITSLQAKRGWMRVVQIIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAALVSVRPLQDWAFGATHTVQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWC HHHHHHHCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH VACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQ HHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCHHCCCEEEEECCCCC EHPQERVTGFMDAETFSAHLRDRQP CCCHHHHHHHHCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]