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The map label for this gene is rodZ [H]

Identifier: 170683159

GI number: 170683159

Start: 2737792

End: 2738802

Strand: Reverse

Name: rodZ [H]

Synonym: EcSMS35_2668

Alternate gene names: 170683159

Gene position: 2738802-2737792 (Counterclockwise)

Preceding gene: 170683806

Following gene: 170682819

Centisome position: 54.04

GC content: 53.12

Gene sequence:

>1011_bases
ATGAATACTGAAGCCACGCACGACCAAAATGAAGCACTTACTACCGGCGCTCGCCTGCGTAATGCTCGCGAACAACTAGG
ACTTAGTCAGCAGGCCGTTGCTGAGCGACTTTGCCTGAAGGTTTCCACGGTACGCGACATTGAAGAAGATAAGGCACCTG
CCGATCTTGCTTCAACATTCCTGCGCGGATATATCCGCTCTTATGCGCGTCTGGTACATATTCCAGAAGAAGAACTGCTA
CCGGGGCTGGAAAAACAGGCTCCACTACGAGCTGCAAAAGTTGCGCCGATGCAGAGTTTTTCCCTCGGTAAACGCCGCAA
AAAACGTGACGGCTGGCTGATGACCTTCACCTGGCTGGTGTTGTTTGTGGTTATTGGCCTGAGCGGTGCCTGGTGGTGGC
AAGACCACAAAGCTCAGCAGGAAGAGATCACCACTATGGCCGATCAATCTTCTGCGGAACTGAATAATAATCAAAGCCAG
AGTGTACCGTTAGATACGTCGACAACCACAGATCAGGCTATGGCGACCACGCCGACATCACCTGTGGATACCACCGCAAC
TAACACGCAAACACCTGCCGCGACGACGGCTCCATCGCCAACCGTCGATTCACAACAGAATGCGGTTGTTCCACCTTCGC
AGGCAAATGTTGATACCGCTGCGACTCCGGCACCAGCGGCAACAACAATGCCAGATGGTGCTGCGCCGTTGCCAACCGAT
CAGGCAGGCGTGACTACGCCGGCGGCTGATCCGAATGCGCTGGTGATGAACTTTACTGCCGATTGCTGGCTGGAGGTTAC
TGATGCTACCGGTAAAAAACTGTTTAGCGGTATGCAGCGTAAAGACGGTAATTTGAACTTAACCGGCCAGGCACCGTACA
AACTGAAAATTGGTGCGCCAGCCGCAGTACAGATCCAGTATCAAGGGAAACCTGTCGATCTGAGTCGTTTTATCAGAACT
AACCAGGTTGCGCGTCTGACCCTCAATGCCGAACAATCACCGGCGCAGTAA

Upstream 100 bases:

>100_bases
ATACTGTATGATAACGGTTAACTTAACGGATGTTTCGCGGTGTGGGTGAGCATGATGGTTCACCGGCATCTCAATTCTCA
TTTAAACGTACCTGCAGCGA

Downstream 100 bases:

>100_bases
CAGACGGGTAACGCGGGAGATTTTTCATGCATAACCAGGCTCCAATTCAACGTAGAAAATCAACACGTATTTACGTTGGG
AATGTGCCGATTGGCGATGG

Product: cytoskeletal protein RodZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELL
PGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELNNNQSQ
SVPLDTSTTTDQAMATTPTSPVDTTATNTQTPAATTAPSPTVDSQQNAVVPPSQANVDTAATPAPAATTMPDGAAPLPTD
QAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT
NQVARLTLNAEQSPAQ

Sequences:

>Translated_336_residues
MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELL
PGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELNNNQSQ
SVPLDTSTTTDQAMATTPTSPVDTTATNTQTPAATTAPSPTVDSQQNAVVPPSQANVDTAATPAPAATTMPDGAAPLPTD
QAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT
NQVARLTLNAEQSPAQ
>Mature_336_residues
MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELL
PGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELNNNQSQ
SVPLDTSTTTDQAMATTPTSPVDTTATNTQTPAATTAPSPTVDSQQNAVVPPSQANVDTAATPAPAATTMPDGAAPLPTD
QAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRT
NQVARLTLNAEQSPAQ

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=338, Percent_Identity=92.8994082840237, Blast_Score=590, Evalue=1e-170,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 36238; Mature: 36238

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV
HHHHHHHHHHEECCCHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEHHHHHHH
LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELNNNQSQSVPLDTSTTTDQAMATTPTS
HHHHHHCCCCEEECCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCC
PVDTTATNTQTPAATTAPSPTVDSQQNAVVPPSQANVDTAATPAPAATTMPDGAAPLPTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP
CCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHCCCCCEEEECCCCEEEEECCC
AAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ
EEEEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV
HHHHHHHHHHEECCCHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEHHHHHHH
LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELNNNQSQSVPLDTSTTTDQAMATTPTS
HHHHHHCCCCEEECCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCC
PVDTTATNTQTPAATTAPSPTVDSQQNAVVPPSQANVDTAATPAPAATTMPDGAAPLPTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAP
CCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHCCCCCEEEECCCCEEEEECCC
AAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ
EEEEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA