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The map label for this gene is ygcQ [H]

Identifier: 170682876

GI number: 170682876

Start: 2968818

End: 2969678

Strand: Reverse

Name: ygcQ [H]

Synonym: EcSMS35_2898

Alternate gene names: 170682876

Gene position: 2969678-2968818 (Counterclockwise)

Preceding gene: 170680852

Following gene: 170682745

Centisome position: 58.59

GC content: 55.4

Gene sequence:

>861_bases
ATGAATATCGCCATTGTGACAATAAATCAGGAGAATGCCGCAATAGCGAGCTGGCTGGCAGAACAGGATTTCAGCGGTTG
TACCCTGGCGCACTGGCAGATTGAACCTCAGCCCGTAGTGGCGGAACAGGTGCTGGATGCGTTGGTGGAACAGTGGCAGC
GAACGCCTGCGGACGTTGTTCTCTTTCCGCCGGGAACGTTTGGCGATGAACTGTCGACCCGGCTGGCCTGGCGTTTACAT
GGTGCAAGCATCTGCCAGGTGACTTCGTTAGATATTCCAACCGTAAGCGTGCGCAAATCCCACTGGGGAAATGCGTTGAC
GGCGACGCTGCAAACAGACAAACGCCCGCTATGCCTTTCGCTGGCACGTCAGGCGGGAGCAGATAAAAACGCCACGTTGT
CCTCTGGGATGCAGCAACTGAACATTGTCCCCGGCGCGCTTCCCGACTGGCTGGTTAGCCTAGAAAACCTGAAAAATGTT
ACCCGCGACCCATTAGCTGAAGCCAGACGGGTGCTGGTGGTGGGGCAGGGCGGAGAGGCAGATAACCAGGAAATCGCTAT
GCTGGCAGAAAAGCTGGGAGCCGAAGTGGGCTACAGTCGGGCACGAGTGATGAACGGTGGCGTTGATGCCGAAAAAGTCA
TTGGTATTTCCGGACATCTGCTGGCACCTGAGGTGTGTATTGTTGTTGGTGCTTCCGGCGCAGCAGCGTTAATGGCGGGC
GTACGCAATAGCAAGTTTGTGGTGGCGATTAATCATGACGCCAGCGCAGCGGTATTTTCACAGGCAGATGTTGGCGTGGT
TGATGACTGGAAAGTGGTGCTGGAGGCACTGGTGACAAACATTCACGCAGATTGCCAATAA

Upstream 100 bases:

>100_bases
GAGCAGAGCAACGACGCGGAGCGACGCTGATTGATGGGCAAACGGTAGCAGAAAAAGCGCAAAAGCTATGGCAGGACTAT
TTACGCCAAAGGATGCAGCC

Downstream 100 bases:

>100_bases
CGTGTTGCCGGATGATCCTGCCTACGGTTCTGGCCTGGGGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGG
CGCTGAATGTCGGATGTGGC

Product: electron transfer flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MNIAIVTINQENAAIASWLAEQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLH
GASICQVTSLDIPTVSVRKSHWGNALTATLQTDKRPLCLSLARQAGADKNATLSSGMQQLNIVPGALPDWLVSLENLKNV
TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG
VRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ

Sequences:

>Translated_286_residues
MNIAIVTINQENAAIASWLAEQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLH
GASICQVTSLDIPTVSVRKSHWGNALTATLQTDKRPLCLSLARQAGADKNATLSSGMQQLNIVPGALPDWLVSLENLKNV
TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG
VRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>Mature_286_residues
MNIAIVTINQENAAIASWLAEQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLH
GASICQVTSLDIPTVSVRKSHWGNALTATLQTDKRPLCLSLARQAGADKNATLSSGMQQLNIVPGALPDWLVSLENLKNV
TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG
VRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ

Specific function: May play a role in a redox process [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI189181759, Length=215, Percent_Identity=35.8139534883721, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI4503607, Length=215, Percent_Identity=35.8139534883721, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI87082157, Length=286, Percent_Identity=97.9020979020979, Blast_Score=565, Evalue=1e-162,
Organism=Escherichia coli, GI1787990, Length=237, Percent_Identity=29.957805907173, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786226, Length=117, Percent_Identity=38.4615384615385, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17506929, Length=217, Percent_Identity=35.0230414746544, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325261, Length=217, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=6e-16,
Organism=Drosophila melanogaster, GI17136898, Length=217, Percent_Identity=35.0230414746544, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24652801, Length=217, Percent_Identity=35.0230414746544, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 30397; Mature: 30397

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAIVTINQENAAIASWLAEQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVV
CEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEE
LFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTDKRPLCLS
EECCCCCCHHHHHHHEEEECCCEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCHHHHH
LARQAGADKNATLSSGMQQLNIVPGALPDWLVSLENLKNVTRDPLAEARRVLVVGQGGEA
HHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCC
DNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG
CCHHHHHHHHHHCHHCCCCHHEEECCCCCHHHEEECCCCEECCEEEEEEECCCHHHHHHC
VRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
CCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIAIVTINQENAAIASWLAEQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVV
CEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEE
LFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTDKRPLCLS
EECCCCCCHHHHHHHEEEECCCEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCHHHHH
LARQAGADKNATLSSGMQQLNIVPGALPDWLVSLENLKNVTRDPLAEARRVLVVGQGGEA
HHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCCC
DNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG
CCHHHHHHHHHHCHHCCCCHHEEECCCCCHHHEEECCCCEECCEEEEEEECCCHHHHHHC
VRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
CCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]