Click here to switch to the map view.

The map label for this gene is yfcJ [H]

Identifier: 170682781

GI number: 170682781

Start: 2525807

End: 2526985

Strand: Reverse

Name: yfcJ [H]

Synonym: EcSMS35_2478

Alternate gene names: 170682781

Gene position: 2526985-2525807 (Counterclockwise)

Preceding gene: 170683941

Following gene: 170681474

Centisome position: 49.86

GC content: 57.08

Gene sequence:

>1179_bases
ATGACTGCTGTAAGCCAAACCGAAACACGATCTTCTGCCAATTTTTCGCTCTTCCGCATCGCTTTTGCGGTTTTTCTCAC
CTACATGACCGTAGGTTTACCGTTGCCGGTTATCCCGCTGTTTGTTCATCATGAGCTGGGCTATGGCAACACCATGGTCG
GGATTGCCGTCGGCATTCAGTTTTTGGCTACGGTGCTGACGCGTGGTTACGCCGGGCGACTGGCCGATCAATATGGCGCA
AAACGTTCGGCGCTTCAGGGGATGTTAGCTTGTGGTCTGGCGGGGGGCGCACTGCTGTTGGCGGCGATTTTGCCCGTCTC
CGCACCGTTCAAATTTGCTCTGTTGGTCGTTGGACGTTTGATTCTTGGCTTTGGTGAAAGCCAGTTACTGACGGGGGCTC
TGACCTGGGGATTGGGCATCGTTGGGCCAAAACATTCCGGCAAAGTGATGTCATGGAACGGAATGGCGATTTACGGTGCC
CTCGCTGTTGGTGCGCCGCTTGGCCTGTTGATTCATAGCCATTACGGTTTTGCCGCACTGGCGCTCACCACAATGGCATT
ACCCTTACTGGCGTGGGCCTGTAACGGCACAGTGCGCAAAGTACCGGCCCTGGCGGGAGAACGTCCATCGCTGTGGAGCG
TTGTCGGGCTTATCTGGAAACCAGGGTTAGGTCTGGCACTACAAGGCGTTGGTTTTGCGGTTATCGGGACTTTCGTTTCG
CTCTACTTTGCCAGCAAAGGATGGGCGATGGCGGGCTTTACTCTTACCGCGTTTGGCGGCGCATTTGTCGTGATGCGCGT
CATGTTTGGCTGGATGCCGGACCGTTTTGGCGGCGTGAAAGTGGCGATCGTCTCTCTGCTTGTAGAAACGGTGGGCTTGT
TGCTGCTCTGGCAAGCCCCAGGGGCGTGGGTCGCATTAGCAGGCGCGGCGTTAACTGGAGCCGGATGTTCGCTTATCTTT
CCTGCGCTGGGCGTGGAGGTGGTTAAACGCGTCCCCTCACACGTTCGCGGCACCGCACTGGGCGGTTACGCCGCGTTTCA
GGATATCGCCCTCGGCGTCTCCGGGCCGCTTGCGGGAATGCTGGCGACCACGTTTGGTTACTCTTCGGTATTTCTTGCCG
GGGCGATCTCTGCGGTGCTGGGAATTATTGTCACGATACTGTCGTTTCGTCGGGGTTAA

Upstream 100 bases:

>100_bases
AAAGACGTATGCGTTAAATCCTGCCAACGCACCGTAACCCTGAAACCAGAGAGATGAGACGGGGATACTCCTCGCCTTGC
GCTGCATTCTGGAGTAATGC

Downstream 100 bases:

>100_bases
CGAACCAGCCAGACCAGCATCAGGATAATCGCGACTAACAGTATCCACAGCGCGGGACGCGTTGCCATATTTTGCAACGT
GTCCATCATCGGTGGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGA
KRSALQGMLACGLAGGALLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGA
LAVGAPLGLLIHSHYGFAALALTTMALPLLAWACNGTVRKVPALAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVS
LYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIF
PALGVEVVKRVPSHVRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG

Sequences:

>Translated_392_residues
MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGA
KRSALQGMLACGLAGGALLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGA
LAVGAPLGLLIHSHYGFAALALTTMALPLLAWACNGTVRKVPALAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVS
LYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIF
PALGVEVVKRVPSHVRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG
>Mature_391_residues
TAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAK
RSALQGMLACGLAGGALLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGAL
AVGAPLGLLIHSHYGFAALALTTMALPLLAWACNGTVRKVPALAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVSL
YFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFP
ALGVEVVKRVPSHVRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family [H]

Homologues:

Organism=Escherichia coli, GI1788662, Length=392, Percent_Identity=98.9795918367347, Blast_Score=747, Evalue=0.0,
Organism=Escherichia coli, GI87082270, Length=365, Percent_Identity=42.7397260273973, Blast_Score=253, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40461; Mature: 40330

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
FLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAAILPVSAPFKFALLVVGRL
HHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGALAVGAPLGLLIHSHYGFAAL
HHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHCHHHHHHHCCCCHHHH
ALTTMALPLLAWACNGTVRKVPALAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVS
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH
LYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAP
HHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEECCC
GAWVALAGAALTGAGCSLIFPALGVEVVKRVPSHVRGTALGGYAAFQDIALGVSGPLAGM
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHH
LATTFGYSSVFLAGAISAVLGIIVTILSFRRG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
FLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAAILPVSAPFKFALLVVGRL
HHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGALAVGAPLGLLIHSHYGFAAL
HHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHCHHHHHHHCCCCHHHH
ALTTMALPLLAWACNGTVRKVPALAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVS
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH
LYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAP
HHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEECCC
GAWVALAGAALTGAGCSLIFPALGVEVVKRVPSHVRGTALGGYAAFQDIALGVSGPLAGM
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHH
LATTFGYSSVFLAGAISAVLGIIVTILSFRRG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]