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The map label for this gene is ppdC [H]

Identifier: 170682705

GI number: 170682705

Start: 3051072

End: 3051419

Strand: Reverse

Name: ppdC [H]

Synonym: EcSMS35_2970

Alternate gene names: 170682705

Gene position: 3051419-3051072 (Counterclockwise)

Preceding gene: 170683020

Following gene: 170683034

Centisome position: 60.2

GC content: 54.02

Gene sequence:

>348_bases
TTGTCCGCTGAAAGAGAGGGCGTTATGTCAGCTTCCCTGAAGAATCAACAAGGCTTTAGTCTGCCGGAGGTAATGTTGGC
GATGGTGTTGATGGTGATGATTGTCACTGCGTTATCGGGTTTCCAGCGAACATTAATGAACAGTCTTGCCAGCAGAAACC
AGTACCAACAGCTCTGGCGGCATGGCTGGCAGCAAACGCAACTGCGTGCGATTTCGCCACCTGCCAACTGGCAGGTCAAC
CGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAACGTTACGCTAGTTTCACCCGGGGGCAGAGAAGGCGAGATGAC
CCGCCTGCATTGCCCGAATCGTCAGTAG

Upstream 100 bases:

>100_bases
AGGCTTTATTGATTGCCGGTTATGAAGGCGTTTCGTTGTGGCGAACAGGCGAAGTCATCGATGGAAACATTGTTTTTTCG
CCACGCGGCTGGAGCGATTT

Downstream 100 bases:

>100_bases
TCAGGAGCCGCTATGTTAAGGGTCTACCATTCCAATCGTCTGGACGTGCTGGAAGCGTTGATGGAGTTTATTGTCGAACG
CGAACGGCTGGACGATCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSAEREGVMSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQVN
RMQTSQAGCVSINVTLVSPGGREGEMTRLHCPNRQ

Sequences:

>Translated_115_residues
MSAEREGVMSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQVN
RMQTSQAGCVSINVTLVSPGGREGEMTRLHCPNRQ
>Mature_114_residues
SAEREGVMSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQVNR
MQTSQAGCVSINVTLVSPGGREGEMTRLHCPNRQ

Specific function: Not yet known [H]

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789187, Length=107, Percent_Identity=99.0654205607477, Blast_Score=217, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022204
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF12528 DUF3728 [H]

EC number: NA

Molecular weight: Translated: 12891; Mature: 12760

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEREGVMSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASRNQYQQLWR
CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
HGWQQTQLRAISPPANWQVNRMQTSQAGCVSINVTLVSPGGREGEMTRLHCPNRQ
CCCCCCCEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SAEREGVMSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASRNQYQQLWR
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
HGWQQTQLRAISPPANWQVNRMQTSQAGCVSINVTLVSPGGREGEMTRLHCPNRQ
CCCCCCCEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]