Click here to switch to the map view.

The map label for this gene is 170682114

Identifier: 170682114

GI number: 170682114

Start: 3836592

End: 3836924

Strand: Reverse

Name: 170682114

Synonym: EcSMS35_3773

Alternate gene names: NA

Gene position: 3836924-3836592 (Counterclockwise)

Preceding gene: 170683726

Following gene: 170681523

Centisome position: 75.7

GC content: 43.84

Gene sequence:

>333_bases
ATGGAGATTGCCGGGCAACCTGCTGTTATCACTTACGTGCCAGAACTGAATGCATTTCGTGGCAAATTCCTGGGCTTGTC
AGGTTATTGTGATTTTGTCTCTGACAGCATTCAGGGGCTGCAAAAAGAAGGGGAGCTTTCCCTGCGAGAGTATCTTGAGG
ATTGTAAAGCTGCGGGTATTGAGCCGTATGCGCGTACAGAAAAGATTAAGACCTTTACATTACGCTATCCAGAATCGCTG
AGTGAACGCCTTAATAATGCGGCTGCGCAGCAACAAGTCTCTGTAAATACTTATATTATTGAAACGCTAAATGAGCGTTT
GAATCATTTATAA

Upstream 100 bases:

>100_bases
ATCCGTCGCCAGATACCGATAAAGGCGCTGTAGAAAGCGTGCGTGACTGGTTACTAAGTATAGGGGTAAAACCATGATCA
AACTGAAGACGCCAAACTCT

Downstream 100 bases:

>100_bases
CTTATAGCGGCCCAACAATTTCTGTTGCGCCGCTATATTTTTGTGGCTCTTAAGATGCCTTTCTAATCAATCGATGCCCC
TCATTCATCATCAGGATTTT

Product: HicB family protein

Products: NA

Alternate protein names: HicB-Related Protein; Addiction Module HicB-Related Protein; Xin-Antitoxin Systems HicB; HicB-Like Protein; Pilus Related Protein HicB

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSDSIQGLQKEGELSLREYLEDCKAAGIEPYARTEKIKTFTLRYPESL
SERLNNAAAQQQVSVNTYIIETLNERLNHL

Sequences:

>Translated_110_residues
MEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSDSIQGLQKEGELSLREYLEDCKAAGIEPYARTEKIKTFTLRYPESL
SERLNNAAAQQQVSVNTYIIETLNERLNHL
>Mature_110_residues
MEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSDSIQGLQKEGELSLREYLEDCKAAGIEPYARTEKIKTFTLRYPESL
SERLNNAAAQQQVSVNTYIIETLNERLNHL

Specific function: Unknown

COG id: COG4226

COG function: function code S; Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12389; Mature: 12389

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSDSIQGLQKEGELSLREYLEDCKAAGI
CCCCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
EPYARTEKIKTFTLRYPESLSERLNNAAAQQQVSVNTYIIETLNERLNHL
CCCHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSDSIQGLQKEGELSLREYLEDCKAAGI
CCCCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
EPYARTEKIKTFTLRYPESLSERLNNAAAQQQVSVNTYIIETLNERLNHL
CCCHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA