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The map label for this gene is cfaA [H]

Identifier: 170681823

GI number: 170681823

Start: 3475708

End: 3476424

Strand: Reverse

Name: cfaA [H]

Synonym: EcSMS35_3389

Alternate gene names: 170681823

Gene position: 3476424-3475708 (Counterclockwise)

Preceding gene: 170682044

Following gene: 170683018

Centisome position: 68.59

GC content: 39.61

Gene sequence:

>717_bases
ATGGTGGCGAAAATTAATCGATTATTACGGCTCGGGCCTGTCTTACTTCTGTGCACATCATTTTTCGCACAATCTAATAT
GACTGTATATCCTATGTCTGTATCTATAAACAGTCAGGGAGAAGGAAGTGTTCGTGTAATATCGAAAACGAATGAAGTCC
AATATATAAAGGCAACCGTATTTCGTATCGATAATCCATCAACACCACAAGAAAAAGAAATCGAAGTAACTTCAGGCGAT
GCAAACCAACTTGTGATAATGCCGCCCAAATTTGCTTTGCCTGGCGGTAGTAGCAAAACCGTGCGTTTTGTGGCAATGGA
ACCTGAGCAAAAAGAAAAAAACTATCGGGTTAAATTTGAAGCTGTACCCAGCATTGATGATGCAACAGATAATAAAAAAG
ATCTCTCCATGCAATTAACGGTTAACTTAATTTGGGGGATTGTTGTCAGCGTGCCACCTCAGCAGCCTGTGGCAAAGTTA
GATATTAACGCCGATAAAAAGCTAATCAATAATGGCAATCAACGTCTGAAGATATTAACCATTGCCTATTGTAAAAATAG
TGGTTCTGCGGAGTGCAGAACACAGACCGTAAATAAAAACATTTTCCCTGGTCAGGAAAGAGTTTTAGAAAGCATATCTG
GCTACGATAAAATCGTTGTCAAATATAATAACTGGATCACCAAGGACAATGGCGAGTTTGAGCTGGCGGTCCATTAA

Upstream 100 bases:

>100_bases
AGAATAAATAATTTTATCTAAAGATGCTTTTTTGTGTTGACTTGAAAAATAGTATGATTTCTAATGCGCCAACTTTTTAT
GAAATAATTTAACTGATTAA

Downstream 100 bases:

>100_bases
TTATCATTGTAATAAACCAAGGAATAGTAATGAAAAAGGTATTCGCAAAATCTCTTCTGGTAGCGGCAATGTTTTCCGTT
GCAGGTTCTGCATTAGCAGT

Product: putative CFA/I fimbrial subunit A

Products: NA

Alternate protein names: Colonization factor antigen I subunit A [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MVAKINRLLRLGPVLLLCTSFFAQSNMTVYPMSVSINSQGEGSVRVISKTNEVQYIKATVFRIDNPSTPQEKEIEVTSGD
ANQLVIMPPKFALPGGSSKTVRFVAMEPEQKEKNYRVKFEAVPSIDDATDNKKDLSMQLTVNLIWGIVVSVPPQQPVAKL
DINADKKLINNGNQRLKILTIAYCKNSGSAECRTQTVNKNIFPGQERVLESISGYDKIVVKYNNWITKDNGEFELAVH

Sequences:

>Translated_238_residues
MVAKINRLLRLGPVLLLCTSFFAQSNMTVYPMSVSINSQGEGSVRVISKTNEVQYIKATVFRIDNPSTPQEKEIEVTSGD
ANQLVIMPPKFALPGGSSKTVRFVAMEPEQKEKNYRVKFEAVPSIDDATDNKKDLSMQLTVNLIWGIVVSVPPQQPVAKL
DINADKKLINNGNQRLKILTIAYCKNSGSAECRTQTVNKNIFPGQERVLESISGYDKIVVKYNNWITKDNGEFELAVH
>Mature_238_residues
MVAKINRLLRLGPVLLLCTSFFAQSNMTVYPMSVSINSQGEGSVRVISKTNEVQYIKATVFRIDNPSTPQEKEIEVTSGD
ANQLVIMPPKFALPGGSSKTVRFVAMEPEQKEKNYRVKFEAVPSIDDATDNKKDLSMQLTVNLIWGIVVSVPPQQPVAKL
DINADKKLINNGNQRLKILTIAYCKNSGSAECRTQTVNKNIFPGQERVLESISGYDKIVVKYNNWITKDNGEFELAVH

Specific function: Might function as a shuttle protein in the transport of fimbria through the periplasmic space or might function as an adhesin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26507; Mature: 26507

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAKINRLLRLGPVLLLCTSFFAQSNMTVYPMSVSINSQGEGSVRVISKTNEVQYIKATV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEECCCEEEEEEEE
FRIDNPSTPQEKEIEVTSGDANQLVIMPPKFALPGGSSKTVRFVAMEPEQKEKNYRVKFE
EEECCCCCCCCCEEEEECCCCCEEEEECCCEECCCCCCCEEEEEEECCCCCCCCEEEEEE
AVPSIDDATDNKKDLSMQLTVNLIWGIVVSVPPQQPVAKLDINADKKLINNGNQRLKILT
ECCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCEEEECCCCHHHHCCCCCEEEEEE
IAYCKNSGSAECRTQTVNKNIFPGQERVLESISGYDKIVVKYNNWITKDNGEFELAVH
EEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCEEECCCCEEEEEEC
>Mature Secondary Structure
MVAKINRLLRLGPVLLLCTSFFAQSNMTVYPMSVSINSQGEGSVRVISKTNEVQYIKATV
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEEEECCCEEEEEEEE
FRIDNPSTPQEKEIEVTSGDANQLVIMPPKFALPGGSSKTVRFVAMEPEQKEKNYRVKFE
EEECCCCCCCCCEEEEECCCCCEEEEECCCEECCCCCCCEEEEEEECCCCCCCCEEEEEE
AVPSIDDATDNKKDLSMQLTVNLIWGIVVSVPPQQPVAKLDINADKKLINNGNQRLKILT
ECCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCEEEECCCCHHHHCCCCCEEEEEE
IAYCKNSGSAECRTQTVNKNIFPGQERVLESISGYDKIVVKYNNWITKDNGEFELAVH
EEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEECCEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2569152; 1352712 [H]