Click here to switch to the map view.

The map label for this gene is yoeF

Identifier: 170681688

GI number: 170681688

Start: 1073728

End: 1074084

Strand: Reverse

Name: yoeF

Synonym: EcSMS35_1056

Alternate gene names: 170681688

Gene position: 1074084-1073728 (Counterclockwise)

Preceding gene: 170680134

Following gene: 170679578

Centisome position: 21.19

GC content: 49.86

Gene sequence:

>357_bases
ATGGCAGGAGTTCGTCAACACGGTTGGAGGGCCATTCCGGCAGTATGCTCAGAATATGGCGCAGATACGCTTCCGGATCG
ATACCGTTCAGACGGCAGGTGCCTGCTTTTCCGGCAACAAGCAGGAATCTCAGCGCTGAAGCAGGAATTAGAGGTAAAAA
CGCCCTACCGGGCCATGAATCACCCGGTCATTGGAGTAGTAACCAAAGCAGATTTAGCCAGCATGGAACAAATATCTTTG
GTGAAATGTTGGTTACGGGAAGCTGGAGCGCACAACGTGTTAGTAACCAGTGCGGTTAATAACAATGGAGTTACAGAACT
TTTTGCCTTGCTGCATACAGAAGAAGGCTGCCGCTAA

Upstream 100 bases:

>100_bases
TCTGGGTAGGAACAGAAAAATCTAAGCTCAGAAAACGGATTAAAGTAAGCGTCAACGGAGCACCATATTGACGCTTATTT
ATTGGTGAGAACTACGTTCC

Downstream 100 bases:

>100_bases
TTTCGATAGGTTCTCAGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACC
CTCATTGAATAAAACAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MAGVRQHGWRAIPAVCSEYGADTLPDRYRSDGRCLLFRQQAGISALKQELEVKTPYRAMNHPVIGVVTKADLASMEQISL
VKCWLREAGAHNVLVTSAVNNNGVTELFALLHTEEGCR

Sequences:

>Translated_118_residues
MAGVRQHGWRAIPAVCSEYGADTLPDRYRSDGRCLLFRQQAGISALKQELEVKTPYRAMNHPVIGVVTKADLASMEQISL
VKCWLREAGAHNVLVTSAVNNNGVTELFALLHTEEGCR
>Mature_117_residues
AGVRQHGWRAIPAVCSEYGADTLPDRYRSDGRCLLFRQQAGISALKQELEVKTPYRAMNHPVIGVVTKADLASMEQISLV
KCWLREAGAHNVLVTSAVNNNGVTELFALLHTEEGCR

Specific function: Unknown

COG id: COG4917

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOEF_ECO57 (Q8X8U4)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   E85825
- PIR:   H90979
- RefSeq:   NP_288511.1
- RefSeq:   NP_310835.1
- ProteinModelPortal:   Q8X8U4
- SMR:   Q8X8U4
- EnsemblBacteria:   EBESCT00000028920
- EnsemblBacteria:   EBESCT00000060250
- GeneID:   912630
- GeneID:   962064
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z3167
- KEGG:   ecs:ECs2808
- GeneTree:   EBGT00050000009389
- HOGENOM:   HBG468192
- OMA:   GISVLKQ
- ProtClustDB:   CLSK880265
- BioCyc:   ECOL83334:ECS2808-MONOMER
- InterPro:   IPR012381

Pfam domain/function: PF10662 PduV-EutP

EC number: NA

Molecular weight: Translated: 13008; Mature: 12877

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVRQHGWRAIPAVCSEYGADTLPDRYRSDGRCLLFRQQAGISALKQELEVKTPYRAMN
CCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHC
HPVIGVVTKADLASMEQISLVKCWLREAGAHNVLVTSAVNNNGVTELFALLHTEEGCR
CCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGVRQHGWRAIPAVCSEYGADTLPDRYRSDGRCLLFRQQAGISALKQELEVKTPYRAMN
CCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHC
HPVIGVVTKADLASMEQISLVKCWLREAGAHNVLVTSAVNNNGVTELFALLHTEEGCR
CCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796