| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is fiu [H]
Identifier: 170681668
GI number: 170681668
Start: 831071
End: 833353
Strand: Reverse
Name: fiu [H]
Synonym: EcSMS35_0829
Alternate gene names: 170681668
Gene position: 833353-831071 (Counterclockwise)
Preceding gene: 170680063
Following gene: 170681313
Centisome position: 16.44
GC content: 53.96
Gene sequence:
>2283_bases ATGGAAAACAATCGCAATTTCCCTGCCAGACAATTTCATTCGCTCACGTTCTTTGCCGGTCTTTGTATTGGCATCACGCC TGTGGCTCAGGCTCTCGCCGCCGAAGGGCAAATTAACGCGGATGACACGCTGGTTGTCGAAGCATCAACGCCTTCGCTTT ATGCGCCACAACAATCTGCCGATCCGAAATTCTCGCGTCCGGTAGCGGATACTACCCGCACGATGACGGTGATTTCTGAA CAAGTGATTAAAGATCAGGGTGCAACCAACCTTACCGACGCGCTCAAAAACGTCCCCGGCGTGGGTGCGTTTTTTGCGGG TGAGAACGGTAACTCCACCACTGGCGACGCCATTTATATGCGTGGTGCCGATACCTCTAACAGTATTTATATTGATGGCA TTCGCGATATCGGCAGCGTCTCGCGCGACACCTTCAATACCGAGCAGGTCGAAGTGATTAAAGGGCCGTCCGGCACCGAC TACGGGCGCAGCGCACCGACGGGCTCGATCAATATGATCAGCAAGCAGCCGCGCAATGATTCGGGCATTGACGCCTCCGC GAGTATTGGCAGCGCCTGGTTCCGCCGCGGCACGCTGGACGTCAATCAGGTCATTGGTGATACCACCGCGGTGCGCCTGA ATGTAATGGGCGAAAAAACGCACGATGCCGGACGCGACAAAGTCAAAAATGAGCGTTACGGCGTCGCCCCTTCTGTCGCT TTTGGCCTTGGTACAGCGAATCGTTTGTATCTTAATTATCTGCATGTCACCCAGCACAACACGCCAGACGGTGGCATTCC GACTATCGGTTTACCGGGCTATTCTGCCCCATCTGCGGGAACAGCGGCCCTGAATCATTCCGGAAAAGTTGATACGCATA ACTTTTACGGCACGGATTCCGATTACGACGATTCGACCACCGACACCGCTACCATGCGTTTTGAGCACGACATCAACGAT AACACCACCATTCGCAATACTACCCGTTGGTCGCGCGTGAAGCAGGATTACCTGATGACGGCGATTATGGGTGGGGCGTC GAATATTACCCAGCCCACCAGCGATGTGAATAGCTGGACGTGGTCACGCACGGCGAATACCAAAGATGTGAGTAACAAAA TTCTCACCAACCAGACCAACCTGACCTCGACGTTCTATACCGGCGCTATCGGTCATGATGTCAGTACCGGCGTGGAATTT ACCCGTGAAACGCAGACTAACTATGGCGTTAATCCGGTGACGTTACCGGCGGTAAATATTTATCATCCTGACAGCAGCAT TCATCCCGGCGGCCTGACGCGCAACGGCGCAAACGCCAATGGTCAGACGGATACCTTCGCAATTTACGCCTTCGATACGC TGCAAATCACCCGTGATTTTGAGCTGAACGGCGGGATCCGTCTGGATAATTATCATACTGAATATGACAGTGCCACCGCC TGCGGCGGCAGCGGACGCGGTGCCATCACCTGCCCAGCTGGTGTGGCAAAAGGTTCTCCGGTCACCACCGTCGACACCGC CAGGTCGGGCAATCTGGTGAACTGGAAAGCCGGGGCGCTGTATCACCTGACGGAAAACGGCAATGTCTATATTAACTATG CCGTTTCCCAGCAGCCTCCGGGCGGCAACAACTTCGCCCTTGCGCAGTCTGGCAGCGGTAACAGTGCCAACCGCACCGAT TTTAAACCGCAAAAAGCCAACACCAGCGAGATTGGCACCAAATGGCAGGTTCTGGATAAACGCCTGTTGCTCACCGCCGC GCTGTTCCGTACTGATATCGAAAATGAAGTTGAGCAAAATGATGACGGAACTTACTCGCAATACGGTAAGAAACGCGTCG AAGGCTATGAGATATCCGGGGCCGGGAATATCACCCCCGCGTGGCAGGTGATTGGCGGCTATACCCAGCAAAAAGCAACC ATCAAAAACGGCAAAGATGTTGCCCAAGATGGTTCCTCATCGCTGCCCTATACGCCGGAGCACGCCTTTACCTTATGGAG CCAATATCAGGCAACCGATGATATTTCCGTTGGTGCGGGCGCACGGTATATCGGCAGTATGCATAAAGGTTCTGACGGCG CGGTGGGAACGCCAGCGTTTACCGAAGGTTATTGGGTCGCCGACGCTAAACTGGGGTATCGGGTTAATCGCAATCTCGAC TTCCAGCTAAACGTCTACAACCTGTTTGATACCGATTACGTCGCCTCAATCAACAAGAGCGGCTACCGTTATCACCCGGG CGAGCCAAGAACCTTCTTGCTCACGGCCAATATGCATTTCTGA
Upstream 100 bases:
>100_bases GCACGAACGCTATCACGAGATTAACAATGGCATCGCATCCGCAGAGATGCTTTCTCGTGGCAGTGAAAATTTCAACATAT AAGAAAAAGTCACCTGCAAA
Downstream 100 bases:
>100_bases TTCAGATGTGGGGCGCAGGCCCCACTTTTTGGAGAACTTGTATGATGTACCACATTCCCGGCGTGCTATCGCCACAGGAC GTCGCCCGGTTTCGCGAACA
Product: catecholate siderophore receptor Fiu
Products: NA
Alternate protein names: Ferric iron uptake protein; TonB-dependent receptor fiu [H]
Number of amino acids: Translated: 760; Mature: 760
Protein sequence:
>760_residues MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQINADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISE QVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTD YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDIND NTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGAIGHDVSTGVEF TRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATA CGGSGRGAITCPAGVAKGSPVTTVDTARSGNLVNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRTD FKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISGAGNITPAWQVIGGYTQQKAT IKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLD FQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF
Sequences:
>Translated_760_residues MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQINADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISE QVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTD YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDIND NTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGAIGHDVSTGVEF TRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATA CGGSGRGAITCPAGVAKGSPVTTVDTARSGNLVNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRTD FKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISGAGNITPAWQVIGGYTQQKAT IKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLD FQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF >Mature_760_residues MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQINADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISE QVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTD YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDIND NTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGAIGHDVSTGVEF TRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATA CGGSGRGAITCPAGVAKGSPVTTVDTARSGNLVNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRTD FKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISGAGNITPAWQVIGGYTQQKAT IKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLD FQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF
Specific function: Involved in the active transport across the outer membrane of iron complexed with catecholate siderophores such as dihydroxybenzoylserine and dihydroxybenzoate. It derives its energy for transport by interacting with the trans-periplasmic membrane protein
COG id: COG4774
COG function: function code P; Outer membrane receptor for monomeric catechols
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787024, Length=760, Percent_Identity=99.2105263157895, Blast_Score=1552, Evalue=0.0, Organism=Escherichia coli, GI1786344, Length=818, Percent_Identity=24.8166259168704, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1790405, Length=207, Percent_Identity=29.951690821256, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1787723, Length=256, Percent_Identity=28.515625, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81881; Mature: 81881
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQINADDTLVVEASTPSLYAPQQSA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCCC DPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYM CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEEE RGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRND ECCCCCCCEEEECCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCC SGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA CCCCCCCCCCHHHHHCCCCCHHHHHCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCCHHH FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDS CCCCCCCEEEEEEEEEEECCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCC DYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWT CCCCCCCCEEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE WSRTANTKDVSNKILTNQTNLTSTFYTGAIGHDVSTGVEFTRETQTNYGVNPVTLPAVNI EECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEE YHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATA ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEECCCCCCCCCCCC CGGSGRGAITCPAGVAKGSPVTTVDTARSGNLVNWKAGALYHLTENGNVYINYAVSQQPP CCCCCCCEEECCCCCCCCCCEEEEECCCCCCEEEEECCEEEEEECCCCEEEEEEECCCCC GGNNFALAQSGSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQN CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DDGTYSQYGKKRVEGYEISGAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPE CCCCHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCCCCEECCCCCHHHCCCCCCCCCCCC HAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLD HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECEECEEECCCEE FQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF EEEEEEEECCCCHHHHHCCCCCEECCCCCEEEEEEECCCC >Mature Secondary Structure MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQINADDTLVVEASTPSLYAPQQSA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCCC DPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYM CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCEEEE RGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRND ECCCCCCCEEEECCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCC SGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA CCCCCCCCCCHHHHHCCCCCHHHHHCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCCHHH FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDS CCCCCCCEEEEEEEEEEECCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCC DYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWT CCCCCCCCEEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE WSRTANTKDVSNKILTNQTNLTSTFYTGAIGHDVSTGVEFTRETQTNYGVNPVTLPAVNI EECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEE YHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATA ECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCEEECCCCCCCCCCCC CGGSGRGAITCPAGVAKGSPVTTVDTARSGNLVNWKAGALYHLTENGNVYINYAVSQQPP CCCCCCCEEECCCCCCCCCCEEEEECCCCCCEEEEECCEEEEEECCCCEEEEEEECCCCC GGNNFALAQSGSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQN CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DDGTYSQYGKKRVEGYEISGAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPE CCCCHHHHHHHHCCCEEECCCCCCCHHHHHHCCCCCCCEECCCCCHHHCCCCCCCCCCCC HAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLD HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECEECEEECCCEE FQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF EEEEEEEECCCCHHHHHCCCCCEECCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]